| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is nadE [H]
Identifier: 73542295
GI number: 73542295
Start: 2860244
End: 2862292
Strand: Reverse
Name: nadE [H]
Synonym: Reut_A2610
Alternate gene names: 73542295
Gene position: 2862292-2860244 (Counterclockwise)
Preceding gene: 73542297
Following gene: 73542291
Centisome position: 75.19
GC content: 64.67
Gene sequence:
>2049_bases ATGAAGAATCCGTTTTTCAACCTGTATTCCCACGGCTTTGCGCGCGTGGCCGTGGGCGTGCCGGTCTGCCGTGTGGCCGA TCCGGCCTTCAATGCCGCCGAAACGATCGCACTGGCCACGCAGGCCGCAAAGCAGGGCGCCGTGCTGGTCGCCTTTCCGG AACTCGGCCTCTCTGCTTATACGTGCGACGACCTGTTCCATCAGCGTGCGCTGCTCGATGCCTGCGAAGCGGCGCTGGGC ACGATTGTCGAGGCGTCGCGCAAGCTTTCCGCCGCGATGATCGTCGGCATGCCGCTGCGGGTCGAGCACCAGTTGTTCAA CTGCGCCGTGGTGGTGGCCCGAGGCCGTGTGCTCGGCGTGGTGCCGAAGTCCTACCTGCCGAACTACTGGGAGTTCTACG AGGCGCGCCAGTTCAGCGAAGCCGACAACGCCGCCACCGATTCCATCCGCCTGCTCGGCCAGGATGTGCCGTTCGGCGCC GGGCTGCTGTTCGAGATCGAGGACATTCCGTTCTTCCGCTTCCATGCGGAGATCTGCGAAGACGTATGGGTGCCGATTCC GCCGTCGTCGTTTGCGGCACTGGCCGGTGCGACGGTGCTGGTCAACCTGTCGGCATCAAACATCGTGATCGGCAAGTCAG GCTACCGGCACCAGCTGGTGTCACAGCAATCGGCGCGTTGCCTGGCCGCCTACCTCTACACGTCGGCTGGCAAGGGCGAG TCGTCGACCGATCTCGCCTGGGACGGGCAGGCGCTGATTTGCGAGAACGGCGAGCTGCTGGCCGAGTCGGAGCGCTTCGC CGATACCTCGCACGTGTTATTTGCGGATGTGGACGTGGAACGCCTGTCCCGAGAACGCATGCATCAGGTGACGTTCGGCC ACTCGGTGCGCCGGCACAAGGCCGAGGTCGACAAATTCCGCGTGGTCCGCTTCCCGCTCGAGGTGTCGCGCGACAAGGCG CTGCCGCTCGAACGCAAGGTGGCGCGCTTCCCGTACGTGCCGGCCGATCCACGCCAGCGCGACGAGCGCTGCCACGAGGT CTACAACATCCAGGTGCAGGCGCTGGTGCAGCGGCTGTCGGCCAGCAAAATTTCCAAGGTGGTGATCGGCGTGTCGGGCG GGCTCGATTCCACACATGCGCTGCTGGTGTGCGCGAAGGCGATGGACCGCCTGGGGTTGCCGCGCTCGAACATCCTGGCC TACACCATGCCGGGCTTTGCGACCAGCGACCGCACGTTGCGCCAGGCGCGCCAACTGATGGAGCTGGTCGGCTGCACCGC GCGCGAGATTGATATCCGGCCGAGTTGCCTCGCGATGCTGAAGGACCTGGACCATCCGTATGCGCGCGGCGAGAAGGTCT ATGACGTGACCTTCGAGAACGTGCAGGCCGGCGAGCGCACCAACCACCTGTTCCGGCTGGCCAATCACAACGGCGCCATT GTGATCGGCACGGGCGACCTCAGCGAACTCGCGCTGGGCTGGTGCACCTACGGCGTGGGCGACCATATGTCGCACTACAA CGTGAATGCGAGCGTGCCGAAGACGCTGATCTCGCACCTGGTGCGCTGGGTGGCCGAGACCGGGCAGGTCGGCGACAGCG GCTCGGAGGTGCTGATCCATGTGCTCGACACGGATATCAGCCCGGAACTGGTGCCTGGCGATTCGAACCACGGGCCGGAG CAGAAGACCGAAAGCACGATCGGCCCGTACGAGCTGCAGGACTTCAATCTCTACTACACGTTGCGGTTCGGCTTTGCGCC GTCCAAGATCGCGTTTCTGTCACTGCACGCGTGGGGCGATCGCGAACGCGGCATCTGGCCGAACGGGCCGCATGTGGTGC GCAACCAGTACGGTCTTCCGGACATCAAGCGCAATCTGGGGATATTCCTTGATCGCTTCTTCCGTACCAGCCAGTTCAAG CGGTCCTGCATTCCGAATGCGCCGAAGGTGGGTTCGGGCGGGTCGCTGTCGCCACGGGGCGACTGGCGTGCGCCGAGCGA CTCCGAATCGGTGGTGTGGCTGAAGGATCTGGAGAAGGTGCCTGACTGA
Upstream 100 bases:
>100_bases GTAGAATGACGTATGGCCGTCACAGCAGCGGCCGCAGGAATCCCCCGATGCCGCCGGCTGCAAGCGCGTGCGATGCAGAC GCCGGCAAACAAGGCCCGAT
Downstream 100 bases:
>100_bases GCGATTGGACAGACTAGGCCGACGGCGGTGACGCAAAGCCGCCGGTCGCCAGATCTTTGCAAAAAGCCATGAGCCAGTCG GCCGTTTCATCAAGCGGGTA
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MKNPFFNLYSHGFARVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAYTCDDLFHQRALLDACEAALG TIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGVVPKSYLPNYWEFYEARQFSEADNAATDSIRLLGQDVPFGA GLLFEIEDIPFFRFHAEICEDVWVPIPPSSFAALAGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGE SSTDLAWDGQALICENGELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRFPLEVSRDKA LPLERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLSASKISKVVIGVSGGLDSTHALLVCAKAMDRLGLPRSNILA YTMPGFATSDRTLRQARQLMELVGCTAREIDIRPSCLAMLKDLDHPYARGEKVYDVTFENVQAGERTNHLFRLANHNGAI VIGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGDSGSEVLIHVLDTDISPELVPGDSNHGPE QKTESTIGPYELQDFNLYYTLRFGFAPSKIAFLSLHAWGDRERGIWPNGPHVVRNQYGLPDIKRNLGIFLDRFFRTSQFK RSCIPNAPKVGSGGSLSPRGDWRAPSDSESVVWLKDLEKVPD
Sequences:
>Translated_682_residues MKNPFFNLYSHGFARVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAYTCDDLFHQRALLDACEAALG TIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGVVPKSYLPNYWEFYEARQFSEADNAATDSIRLLGQDVPFGA GLLFEIEDIPFFRFHAEICEDVWVPIPPSSFAALAGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGE SSTDLAWDGQALICENGELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRFPLEVSRDKA LPLERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLSASKISKVVIGVSGGLDSTHALLVCAKAMDRLGLPRSNILA YTMPGFATSDRTLRQARQLMELVGCTAREIDIRPSCLAMLKDLDHPYARGEKVYDVTFENVQAGERTNHLFRLANHNGAI VIGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGDSGSEVLIHVLDTDISPELVPGDSNHGPE QKTESTIGPYELQDFNLYYTLRFGFAPSKIAFLSLHAWGDRERGIWPNGPHVVRNQYGLPDIKRNLGIFLDRFFRTSQFK RSCIPNAPKVGSGGSLSPRGDWRAPSDSESVVWLKDLEKVPD >Mature_682_residues MKNPFFNLYSHGFARVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAYTCDDLFHQRALLDACEAALG TIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGVVPKSYLPNYWEFYEARQFSEADNAATDSIRLLGQDVPFGA GLLFEIEDIPFFRFHAEICEDVWVPIPPSSFAALAGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGE SSTDLAWDGQALICENGELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRFPLEVSRDKA LPLERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLSASKISKVVIGVSGGLDSTHALLVCAKAMDRLGLPRSNILA YTMPGFATSDRTLRQARQLMELVGCTAREIDIRPSCLAMLKDLDHPYARGEKVYDVTFENVQAGERTNHLFRLANHNGAI VIGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGDSGSEVLIHVLDTDISPELVPGDSNHGPE QKTESTIGPYELQDFNLYYTLRFGFAPSKIAFLSLHAWGDRERGIWPNGPHVVRNQYGLPDIKRNLGIFLDRFFRTSQFK RSCIPNAPKVGSGGSLSPRGDWRAPSDSESVVWLKDLEKVPD
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=523, Percent_Identity=23.5181644359465, Blast_Score=99, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17538756, Length=275, Percent_Identity=29.8181818181818, Blast_Score=100, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321865, Length=285, Percent_Identity=27.0175438596491, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24641841, Length=268, Percent_Identity=25.3731343283582, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI24641843, Length=268, Percent_Identity=25.3731343283582, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 75280; Mature: 75280
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPFFNLYSHGFARVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAY CCCCCHHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEE TCDDLFHQRALLDACEAALGTIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGV EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHEEEEEECCCEEEE VPKSYLPNYWEFYEARQFSEADNAATDSIRLLGQDVPFGAGLLFEIEDIPFFRFHAEICE CCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH DVWVPIPPSSFAALAGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGE CCCCCCCCCHHHHHCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC SSTDLAWDGQALICENGELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHK CCCCEEECCCEEEECCCCEEECCHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH AEVDKFRVVRFPLEVSRDKALPLERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLS HHHCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASKISKVVIGVSGGLDSTHALLVCAKAMDRLGLPRSNILAYTMPGFATSDRTLRQARQLM HHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH ELVGCTAREIDIRPSCLAMLKDLDHPYARGEKVYDVTFENVQAGERTNHLFRLANHNGAI HHHCCCCEEECCCHHHHHHHHHCCCHHHCCCEEEEEEECCCCCCCCCCCEEEEECCCCEE VIGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGDSGSEVLIH EEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE VLDTDISPELVPGDSNHGPEQKTESTIGPYELQDFNLYYTLRFGFAPSKIAFLSLHAWGD EECCCCCCCEECCCCCCCCCHHHHCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCC RERGIWPNGPHVVRNQYGLPDIKRNLGIFLDRFFRTSQFKRSCIPNAPKVGSGGSLSPRG CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DWRAPSDSESVVWLKDLEKVPD CCCCCCCCCCEEEHHHHHCCCC >Mature Secondary Structure MKNPFFNLYSHGFARVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAY CCCCCHHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEE TCDDLFHQRALLDACEAALGTIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGV EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHEEEEEECCCEEEE VPKSYLPNYWEFYEARQFSEADNAATDSIRLLGQDVPFGAGLLFEIEDIPFFRFHAEICE CCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH DVWVPIPPSSFAALAGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGE CCCCCCCCCHHHHHCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC SSTDLAWDGQALICENGELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHK CCCCEEECCCEEEECCCCEEECCHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH AEVDKFRVVRFPLEVSRDKALPLERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLS HHHCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ASKISKVVIGVSGGLDSTHALLVCAKAMDRLGLPRSNILAYTMPGFATSDRTLRQARQLM HHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH ELVGCTAREIDIRPSCLAMLKDLDHPYARGEKVYDVTFENVQAGERTNHLFRLANHNGAI HHHCCCCEEECCCHHHHHHHHHCCCHHHCCCEEEEEEECCCCCCCCCCCEEEEECCCCEE VIGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGDSGSEVLIH EEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE VLDTDISPELVPGDSNHGPEQKTESTIGPYELQDFNLYYTLRFGFAPSKIAFLSLHAWGD EECCCCCCCEECCCCCCCCCHHHHCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCC RERGIWPNGPHVVRNQYGLPDIKRNLGIFLDRFFRTSQFKRSCIPNAPKVGSGGSLSPRG CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DWRAPSDSESVVWLKDLEKVPD CCCCCCCCCCEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]