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The map label for this gene is glxA [H]

Identifier: 73542290

GI number: 73542290

Start: 2856875

End: 2857834

Strand: Reverse

Name: glxA [H]

Synonym: Reut_A2605

Alternate gene names: 73542290

Gene position: 2857834-2856875 (Counterclockwise)

Preceding gene: 73542291

Following gene: 73542289

Centisome position: 75.08

GC content: 66.25

Gene sequence:

>960_bases
ATGAAGATTGCCGTGCTTGCGTTTCCCGGGGTCCAGATGCTGGATCTGGCCGGCCCTATCGACGTCTTTCACGAAGGGGC
GCGCCAGGCAGGGGAGCCGGGTGCCTATGTGTTCGAGATCGTGTCGGCGGTCCCCGGCGTGCTGCGTGCGTCCAATGGCA
TGACCATCACGCCAGACACGACGCTGGAAACCAGCAGCCCGGATATTGACACTTTGTTGATCGCCGGCAGCCCGCTGGTC
AGCCAGGTCGAGAAAGACAGCGCCATCGGAAACTGGCTGACCCGCTATGCGCGCACGGTCCGCCGGCTGGGGTCCGTATG
CTCGGGCGCCATGCTTCTGGCACACGCGGGCTTGCTGGACGGCCGCAACGCCACCACGCACTGGAACTCTACCGAACGGC
TGTCGCGGCAGTTTCCTCAGGTCAGGGTGCAGCCGGACCAGATCTACGTGAAGGACGGCAATCTCTACACCTCGGCCGGC
GTCACAGCGGGGCTGGACCTGGCGCTGGCGATGGTCGAGGAGGACTTCGGCCGCACGGTAGCGCTGAAGGTGGCGCGGGA
ATTCGTGATGTTCCTGAAGCGCCCCGGCGGCCAGTCGCAGTTCAGCGCGCACCTGGCGGCGCAGGGCGCCGAGAAGAGTG
CCATTCGCGATGTGCAGAACTGGGTGCTGGAAAACCTGGCGGAACGCCTGTCCGTAGAGAGCCTGGCCGAGCGGGCCGGC
ATGAGCACGCGCAACTTCGCCCGAATCTTCAAGCAGGAATGCCAGGTCACGCCGGCGGACTTTGTCGAGGGCGCGCGCAT
TGACGCGGCGCGCCGCCAGCTTGAGGAAACGCGCAATCCGCTCAAGCGCGTCGCGGCGGTGACCGGCTTTAACGATCCCA
ACAGCCTGCGCCGGGCATTCCTGCGACGCCTGGGCGTGTCGCCGGCCGACTACCGTCGGCGCTTTCGCTCGACCGCATAG

Upstream 100 bases:

>100_bases
CCGGCCCGCGATCGATGGATCCCGTCAGACTAGTTGGCCGAAACTGACTAAACTGGCGGAATCGGTTTCCTCCGCCTCAT
AGTCATACGGTCGTGAAGTC

Downstream 100 bases:

>100_bases
CGTCCAGTATCGCTAGCCTTATGCACAAGCGATCCACAGCCCGTCCACAACCCCTCCACAGGCCTTCCACAGTTTTCCCC
GGTCGTTGCCCACAAGGTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKIAVLAFPGVQMLDLAGPIDVFHEGARQAGEPGAYVFEIVSAVPGVLRASNGMTITPDTTLETSSPDIDTLLIAGSPLV
SQVEKDSAIGNWLTRYARTVRRLGSVCSGAMLLAHAGLLDGRNATTHWNSTERLSRQFPQVRVQPDQIYVKDGNLYTSAG
VTAGLDLALAMVEEDFGRTVALKVAREFVMFLKRPGGQSQFSAHLAAQGAEKSAIRDVQNWVLENLAERLSVESLAERAG
MSTRNFARIFKQECQVTPADFVEGARIDAARRQLEETRNPLKRVAAVTGFNDPNSLRRAFLRRLGVSPADYRRRFRSTA

Sequences:

>Translated_319_residues
MKIAVLAFPGVQMLDLAGPIDVFHEGARQAGEPGAYVFEIVSAVPGVLRASNGMTITPDTTLETSSPDIDTLLIAGSPLV
SQVEKDSAIGNWLTRYARTVRRLGSVCSGAMLLAHAGLLDGRNATTHWNSTERLSRQFPQVRVQPDQIYVKDGNLYTSAG
VTAGLDLALAMVEEDFGRTVALKVAREFVMFLKRPGGQSQFSAHLAAQGAEKSAIRDVQNWVLENLAERLSVESLAERAG
MSTRNFARIFKQECQVTPADFVEGARIDAARRQLEETRNPLKRVAAVTGFNDPNSLRRAFLRRLGVSPADYRRRFRSTA
>Mature_319_residues
MKIAVLAFPGVQMLDLAGPIDVFHEGARQAGEPGAYVFEIVSAVPGVLRASNGMTITPDTTLETSSPDIDTLLIAGSPLV
SQVEKDSAIGNWLTRYARTVRRLGSVCSGAMLLAHAGLLDGRNATTHWNSTERLSRQFPQVRVQPDQIYVKDGNLYTSAG
VTAGLDLALAMVEEDFGRTVALKVAREFVMFLKRPGGQSQFSAHLAAQGAEKSAIRDVQNWVLENLAERLSVESLAERAG
MSTRNFARIFKQECQVTPADFVEGARIDAARRQLEETRNPLKRVAAVTGFNDPNSLRRAFLRRLGVSPADYRRRFRSTA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34888; Mature: 34888

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVLAFPGVQMLDLAGPIDVFHEGARQAGEPGAYVFEIVSAVPGVLRASNGMTITPDT
CEEEEEECCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCC
TLETSSPDIDTLLIAGSPLVSQVEKDSAIGNWLTRYARTVRRLGSVCSGAMLLAHAGLLD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRNATTHWNSTERLSRQFPQVRVQPDQIYVKDGNLYTSAGVTAGLDLALAMVEEDFGRTV
CCCCCCCCCHHHHHHHHCCCEEECCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCHH
ALKVAREFVMFLKRPGGQSQFSAHLAAQGAEKSAIRDVQNWVLENLAERLSVESLAERAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MSTRNFARIFKQECQVTPADFVEGARIDAARRQLEETRNPLKRVAAVTGFNDPNSLRRAF
CCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LRRLGVSPADYRRRFRSTA
HHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKIAVLAFPGVQMLDLAGPIDVFHEGARQAGEPGAYVFEIVSAVPGVLRASNGMTITPDT
CEEEEEECCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCC
TLETSSPDIDTLLIAGSPLVSQVEKDSAIGNWLTRYARTVRRLGSVCSGAMLLAHAGLLD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRNATTHWNSTERLSRQFPQVRVQPDQIYVKDGNLYTSAGVTAGLDLALAMVEEDFGRTV
CCCCCCCCCHHHHHHHHCCCEEECCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCHH
ALKVAREFVMFLKRPGGQSQFSAHLAAQGAEKSAIRDVQNWVLENLAERLSVESLAERAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MSTRNFARIFKQECQVTPADFVEGARIDAARRQLEETRNPLKRVAAVTGFNDPNSLRRAF
CCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LRRLGVSPADYRRRFRSTA
HHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]