| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is iorB [H]
Identifier: 73542194
GI number: 73542194
Start: 2748698
End: 2750977
Strand: Reverse
Name: iorB [H]
Synonym: Reut_A2509
Alternate gene names: 73542194
Gene position: 2750977-2748698 (Counterclockwise)
Preceding gene: 73542196
Following gene: 73542191
Centisome position: 72.27
GC content: 67.41
Gene sequence:
>2280_bases ATGACTTCGACCATCCTCGATACCGTTCGCGAGGCGGAGGCCCCCACCCCGCGCGTGCAGCGCCTGGCGCTGCTGCAGGC GCGTGGCGTGCTGCTGATCACGCGTGCGCCGCAGGCCGCGGCGCGACCGGCGGCGGGCCAGCCCGGTGCGGCTTCCGACT ATGTGCCGGCGCTGCCCGATATCTTCGTCGCCGTACGTGACACCGGCGAAGTGCTGGCTTTCAATGGCCACGTGGATCTG GGCACTGGCATCCGTACCGCACTCGCGCAGATCGTCGCAGAAGAACTCGACGTGCCGCTCGCGCGCGTGCGCATGGTGCT CGGCCATACCGACGCGACGCCCAACCAGGGTCCGACGATCGCGAGCGCATCGATCCAGATTTCGGCAATTCCATTGCGGC GTGCAGCGGCCCAGGCTCGCGCGTGGCTGCAGGCGCGCGCGGCGAACCAGCTCGGCGTAGCAGCGGATGCGCTCGAAGCG GACGACGGTGTGTTCCGCGTGAAGGGGACGCAGCACGGTATCGGCTACGGTGCGTTGGTGGCCGACGAGCACGTCGAGCT GCCACTCGCGGATGATGTACAGACCAAGCCTGTCGAGTCGTACCGTATCGTCGGCCGCGGCGCAGGCCGTGTGGATATCC CCGACAAGGCGCGCGGCGTGCTGACCTTCGTGCATGACGTGCGCGTGCCCGGCATGCTGCACGGCCGCGTGGTGCGCCCG CCGTACGCCGGCCGCGACAGCGGCGATTTCGTCGGCACGAGCTTGCTCGACGTCGATCGCAATTCCGTGCGCGATGTACC GGGGCTGGTGGACATCGTGGTGCAGGGCGACTTCATCGGCGTGGTAGCCGAGCGCGAGGAATATGCGGTGATGGCCGCGC GCCGCCTGCGCGTGCATTGGAAGCCGGTGCCCCCGTTGCCTGCGCTCGACGATCCCGAGCCCGCGCTGCGCGCCAACCCT GCCACGCGCCGTGAACTGCTCGATGATGGCGAGATACCCGCACCCGACGCTGGCACCACGCTCGAACGCCACTACACCTG GCCTTACCAGATGCATGGCTCGATCGGGCCGTCATGTGCCGTAGCCGACTGGCGCGAAGATGGCCTGACCGTGTGGTCCG GCACGCAGAATCCGCATGTACTGCGTATCGATCTGGCGCGCCTCTCCGGGCTGGGCGAGGGCAGCATCGAGATCGTCCGC ATGGATGCCGCCGGCTGCTACGGTCGCAACTGTGCCGACGACGTTTGCGCCGATGCCGTGCTGCTGTCGCGCGCGGTCGG CCGTCCCGTACGCGTGCAGCTATCGCGCGAGCAGGAACACCTGTGGGAGCCCAAGGGCGCAGCGCAGCTCATGGATGTCA GCGCCACGCTCGGCAGCAATGGTGAACTGCTTGGCTACGACTTCGTCAGCCGCTATCCGTCCAACGATGCACCGACGCTC GCGCTGCTGCTCACCGGACAGTTGCCGAATGCGCGGCGCATGCTTGAGATGGGCGATCGCACCGCGGTACCGCCGTATGC CTACTCCGGCCGCCGCATCCGCTGCGACGACACCCCGGCGATCGTGCGCGCATCGTGGTTGCGTGGCGTATCGGCGCTGC CGAATACGTTCGCGCATGAATCCATGATCGATGAACTGGCGGCAGAAGCGGGTGTGGACCCGGTGGATTTCCGCTTGCGA CATCTCCCCGACAATCGCGCGGCTGACCTGCTGCGTGCCGTGGCAGAGGCCGCGGGCTGGCAACGCGGTGCGAACGGTTC GCGCGGCGTGCCCGATGCGAACGGAAAACTGCACGGCCGCGGCGTCGCGTATGCGCGATATATCCACAGCCGTTTCCCAG GCTTCGGCGCGGCATGGGCTGCGTGGATTCTCGATCTGTCGGTCGATGTCGCCAGCGGACAGATCGTCGTCAGGAAGATC TTCGTGGGTCAGGACACCGGCATGATGGTCAACCCGGACGGCGTACGTCACCAGATCCACGGCAACGTCGTGCAGACGCT GAGCCGCGTGCTCAAGGAGCAGGTGCGCTTTGATGGCGACGGTGTGGCCAGTCGCGAATGGGGCGGCTATCCGTTGCTGA CCTTTCCGGAGATTCCACCGATCGAGGTGCTGCTGATGCCGAGGCAGTCAGAGCCGCCGATGGGAGCGGGCGAATCGGCA TCATTGCCGGGGGCGCCGGCGATTGCGAATGCGCTGTTTGATGCGACGGGTGTTCGGCTGAGACGGCCGCCGTTTGTGCC GGAGACGGTGTTGGCGGCGCTACAAGGCCGACGCCCCTAG
Upstream 100 bases:
>100_bases GTCATGTTGGATGGCTCGGCATCATGATGTCTGTTGGAGGGCAGTATAACGGTGGCATAGCGGGTGCCGCCCCACGCAAA GCGGCAAAAATAATCGACCC
Downstream 100 bases:
>100_bases CAATCCGCTGTCTTGCTCCCTTCCCCGCTGGCGGGAGAGGGGAGCAAACCGGCGGCACTACTAGCGGGGCTGCTCAACTC CCACCGTTCCCCTCATCAAT
Product: isoquinoline 1-oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MTSTILDTVREAEAPTPRVQRLALLQARGVLLITRAPQAAARPAAGQPGAASDYVPALPDIFVAVRDTGEVLAFNGHVDL GTGIRTALAQIVAEELDVPLARVRMVLGHTDATPNQGPTIASASIQISAIPLRRAAAQARAWLQARAANQLGVAADALEA DDGVFRVKGTQHGIGYGALVADEHVELPLADDVQTKPVESYRIVGRGAGRVDIPDKARGVLTFVHDVRVPGMLHGRVVRP PYAGRDSGDFVGTSLLDVDRNSVRDVPGLVDIVVQGDFIGVVAEREEYAVMAARRLRVHWKPVPPLPALDDPEPALRANP ATRRELLDDGEIPAPDAGTTLERHYTWPYQMHGSIGPSCAVADWREDGLTVWSGTQNPHVLRIDLARLSGLGEGSIEIVR MDAAGCYGRNCADDVCADAVLLSRAVGRPVRVQLSREQEHLWEPKGAAQLMDVSATLGSNGELLGYDFVSRYPSNDAPTL ALLLTGQLPNARRMLEMGDRTAVPPYAYSGRRIRCDDTPAIVRASWLRGVSALPNTFAHESMIDELAAEAGVDPVDFRLR HLPDNRAADLLRAVAEAAGWQRGANGSRGVPDANGKLHGRGVAYARYIHSRFPGFGAAWAAWILDLSVDVASGQIVVRKI FVGQDTGMMVNPDGVRHQIHGNVVQTLSRVLKEQVRFDGDGVASREWGGYPLLTFPEIPPIEVLLMPRQSEPPMGAGESA SLPGAPAIANALFDATGVRLRRPPFVPETVLAALQGRRP
Sequences:
>Translated_759_residues MTSTILDTVREAEAPTPRVQRLALLQARGVLLITRAPQAAARPAAGQPGAASDYVPALPDIFVAVRDTGEVLAFNGHVDL GTGIRTALAQIVAEELDVPLARVRMVLGHTDATPNQGPTIASASIQISAIPLRRAAAQARAWLQARAANQLGVAADALEA DDGVFRVKGTQHGIGYGALVADEHVELPLADDVQTKPVESYRIVGRGAGRVDIPDKARGVLTFVHDVRVPGMLHGRVVRP PYAGRDSGDFVGTSLLDVDRNSVRDVPGLVDIVVQGDFIGVVAEREEYAVMAARRLRVHWKPVPPLPALDDPEPALRANP ATRRELLDDGEIPAPDAGTTLERHYTWPYQMHGSIGPSCAVADWREDGLTVWSGTQNPHVLRIDLARLSGLGEGSIEIVR MDAAGCYGRNCADDVCADAVLLSRAVGRPVRVQLSREQEHLWEPKGAAQLMDVSATLGSNGELLGYDFVSRYPSNDAPTL ALLLTGQLPNARRMLEMGDRTAVPPYAYSGRRIRCDDTPAIVRASWLRGVSALPNTFAHESMIDELAAEAGVDPVDFRLR HLPDNRAADLLRAVAEAAGWQRGANGSRGVPDANGKLHGRGVAYARYIHSRFPGFGAAWAAWILDLSVDVASGQIVVRKI FVGQDTGMMVNPDGVRHQIHGNVVQTLSRVLKEQVRFDGDGVASREWGGYPLLTFPEIPPIEVLLMPRQSEPPMGAGESA SLPGAPAIANALFDATGVRLRRPPFVPETVLAALQGRRP >Mature_758_residues TSTILDTVREAEAPTPRVQRLALLQARGVLLITRAPQAAARPAAGQPGAASDYVPALPDIFVAVRDTGEVLAFNGHVDLG TGIRTALAQIVAEELDVPLARVRMVLGHTDATPNQGPTIASASIQISAIPLRRAAAQARAWLQARAANQLGVAADALEAD DGVFRVKGTQHGIGYGALVADEHVELPLADDVQTKPVESYRIVGRGAGRVDIPDKARGVLTFVHDVRVPGMLHGRVVRPP YAGRDSGDFVGTSLLDVDRNSVRDVPGLVDIVVQGDFIGVVAEREEYAVMAARRLRVHWKPVPPLPALDDPEPALRANPA TRRELLDDGEIPAPDAGTTLERHYTWPYQMHGSIGPSCAVADWREDGLTVWSGTQNPHVLRIDLARLSGLGEGSIEIVRM DAAGCYGRNCADDVCADAVLLSRAVGRPVRVQLSREQEHLWEPKGAAQLMDVSATLGSNGELLGYDFVSRYPSNDAPTLA LLLTGQLPNARRMLEMGDRTAVPPYAYSGRRIRCDDTPAIVRASWLRGVSALPNTFAHESMIDELAAEAGVDPVDFRLRH LPDNRAADLLRAVAEAAGWQRGANGSRGVPDANGKLHGRGVAYARYIHSRFPGFGAAWAAWILDLSVDVASGQIVVRKIF VGQDTGMMVNPDGVRHQIHGNVVQTLSRVLKEQVRFDGDGVASREWGGYPLLTFPEIPPIEVLLMPRQSEPPMGAGESAS LPGAPAIANALFDATGVRLRRPPFVPETVLAALQGRRP
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789230, Length=407, Percent_Identity=24.0786240786241, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1789246, Length=149, Percent_Identity=29.5302013422819, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1786478, Length=432, Percent_Identity=23.3796296296296, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 81483; Mature: 81351
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTILDTVREAEAPTPRVQRLALLQARGVLLITRAPQAAARPAAGQPGAASDYVPALPD CCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCC IFVAVRDTGEVLAFNGHVDLGTGIRTALAQIVAEELDVPLARVRMVLGHTDATPNQGPTI EEEEEECCCCEEEEECCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEE ASASIQISAIPLRRAAAQARAWLQARAANQLGVAADALEADDGVFRVKGTQHGIGYGALV EECEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCCCEEEEE ADEHVELPLADDVQTKPVESYRIVGRGAGRVDIPDKARGVLTFVHDVRVPGMLHGRVVRP ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCHHEEEEHHCCCCCEECCEEECC PYAGRDSGDFVGTSLLDVDRNSVRDVPGLVDIVVQGDFIGVVAEREEYAVMAARRLRVHW CCCCCCCCCCCCCEEEECCCHHHHCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHEEEE KPVPPLPALDDPEPALRANPATRRELLDDGEIPAPDAGTTLERHYTWPYQMHGSIGPSCA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHEECCCEEECCCCCCCCE VADWREDGLTVWSGTQNPHVLRIDLARLSGLGEGSIEIVRMDAAGCYGRNCADDVCADAV EECCCCCCEEEEECCCCCEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH LLSRAVGRPVRVQLSREQEHLWEPKGAAQLMDVSATLGSNGELLGYDFVSRYPSNDAPTL HHHHHCCCCEEEEECCCHHHCCCCCCCHHHEEEHHHCCCCCCEEEEHHHHHCCCCCCCEE ALLLTGQLPNARRMLEMGDRTAVPPYAYSGRRIRCDDTPAIVRASWLRGVSALPNTFAHE EEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH SMIDELAAEAGVDPVDFRLRHLPDNRAADLLRAVAEAAGWQRGANGSRGVPDANGKLHGR HHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC GVAYARYIHSRFPGFGAAWAAWILDLSVDVASGQIVVRKIFVGQDTGMMVNPDGVRHQIH CHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCEEEEEEEEECCCCCEEECCCCCCEECC GNVVQTLSRVLKEQVRFDGDGVASREWGGYPLLTFPEIPPIEVLLMPRQSEPPMGAGESA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC SLPGAPAIANALFDATGVRLRRPPFVPETVLAALQGRRP CCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TSTILDTVREAEAPTPRVQRLALLQARGVLLITRAPQAAARPAAGQPGAASDYVPALPD CHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCC IFVAVRDTGEVLAFNGHVDLGTGIRTALAQIVAEELDVPLARVRMVLGHTDATPNQGPTI EEEEEECCCCEEEEECCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEE ASASIQISAIPLRRAAAQARAWLQARAANQLGVAADALEADDGVFRVKGTQHGIGYGALV EECEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCCCEEEEE ADEHVELPLADDVQTKPVESYRIVGRGAGRVDIPDKARGVLTFVHDVRVPGMLHGRVVRP ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCHHEEEEHHCCCCCEECCEEECC PYAGRDSGDFVGTSLLDVDRNSVRDVPGLVDIVVQGDFIGVVAEREEYAVMAARRLRVHW CCCCCCCCCCCCCEEEECCCHHHHCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHEEEE KPVPPLPALDDPEPALRANPATRRELLDDGEIPAPDAGTTLERHYTWPYQMHGSIGPSCA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHEECCCEEECCCCCCCCE VADWREDGLTVWSGTQNPHVLRIDLARLSGLGEGSIEIVRMDAAGCYGRNCADDVCADAV EECCCCCCEEEEECCCCCEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH LLSRAVGRPVRVQLSREQEHLWEPKGAAQLMDVSATLGSNGELLGYDFVSRYPSNDAPTL HHHHHCCCCEEEEECCCHHHCCCCCCCHHHEEEHHHCCCCCCEEEEHHHHHCCCCCCCEE ALLLTGQLPNARRMLEMGDRTAVPPYAYSGRRIRCDDTPAIVRASWLRGVSALPNTFAHE EEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH SMIDELAAEAGVDPVDFRLRHLPDNRAADLLRAVAEAAGWQRGANGSRGVPDANGKLHGR HHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC GVAYARYIHSRFPGFGAAWAAWILDLSVDVASGQIVVRKIFVGQDTGMMVNPDGVRHQIH CHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCEEEEEEEEECCCCCEEECCCCCCEECC GNVVQTLSRVLKEQVRFDGDGVASREWGGYPLLTFPEIPPIEVLLMPRQSEPPMGAGESA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC SLPGAPAIANALFDATGVRLRRPPFVPETVLAALQGRRP CCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]