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The map label for this gene is copD [H]

Identifier: 73542171

GI number: 73542171

Start: 2725971

End: 2726882

Strand: Reverse

Name: copD [H]

Synonym: Reut_A2486

Alternate gene names: 73542171

Gene position: 2726882-2725971 (Counterclockwise)

Preceding gene: 73542172

Following gene: 73542170

Centisome position: 71.64

GC content: 66.01

Gene sequence:

>912_bases
ATGGAGGCCGACTGGGCAACCATCGCCGTGCGCTTTGCGCTCTATGCGGACATGATGCTGTTGTTCGGTGTACCGCTTGC
CGCGAAGTTGTGGTTGCGCGTCGGGGGGCGTCCCGGCTGGCATTGCGGTCGGGTTGCCGCAGGGGCGGCGGGGGCGGGCA
TTGTGCTGTCGGTCGCCAGTCTGGTGCTCGCTGTGAAAACGATGACCGGTGTGGAGTCATACGGGGCGATCGACAGCGAT
ACTGTCTGGATGATCGCGACCGAGACCGGCTTTGGCGTTGCGTGGCAAGTGAGGGTGTTCGCACTGCTGGCGTGCCTGCT
TGCCACCTTGGCCCCGTGCCTTCGGCGGGGCAGGGTCATTCAGTTGCTGGCTGCCGCGATCGCACTGTCCACGCTGGCTT
GGGGTGGACATGGCGTCATGGACGAAGGCACTCGGCACACCGTCCATTTGAGCGCCGACATCATCCATCTGCTGGCGGCG
GGCGCGTGGGTCGGTGCGCTGGTCACCTTCGTACGGATGTCATCGCCGGACTGCACGGCGACGGACGACGGCGTTGCCGA
ACTGAGCCGGGCCGCGAACGGCTTTGCGCACATCGGTACCGGCATCGTGGTTGCGCTGGTGCTGACAGGGACTGTCAACT
ACGTCATGATCGCAGGCCCGACATTGTCCGGCCTGCTGACCACGCGCTACGGCGCGTTGCTGCTGGCCAAGCTCGCGCTG
TTCGGTGCCATGCTGGCGCTGGCAGCCGTCAATCGCTACCGCCTGGGCCCGCGGCTCGCGCACGACGTGCGCACCGGCGA
TAACAGGACCGCCCTGGCTGCATTGCGCCGAAGCCTGCGGTTCGAGTCTGGTTGTGCCATGCTTGTGCTGTTCCTTGTGG
CATGGCTCGGCACGCTGTCCCCCTTGCCCTGA

Upstream 100 bases:

>100_bases
AACCCGCTTGTGCCGGGCACCTATCGCGTGGACTGGCGCGCGGTATCGGCCGATACGCATCCGATCACCGGCAAGCTCTC
CTTTACCGTCAAGTGATCGC

Downstream 100 bases:

>100_bases
TCTAGCTGCCGATTTTCTGAACCCGCTATCCATTTCCATCCATGACCACTGAATCTGTTGGTGCCGATTCCCGACGCAGA
ACCATTCTTGCTGCCCTGGC

Product: copper resistance D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEADWATIAVRFALYADMMLLFGVPLAAKLWLRVGGRPGWHCGRVAAGAAGAGIVLSVASLVLAVKTMTGVESYGAIDSD
TVWMIATETGFGVAWQVRVFALLACLLATLAPCLRRGRVIQLLAAAIALSTLAWGGHGVMDEGTRHTVHLSADIIHLLAA
GAWVGALVTFVRMSSPDCTATDDGVAELSRAANGFAHIGTGIVVALVLTGTVNYVMIAGPTLSGLLTTRYGALLLAKLAL
FGAMLALAAVNRYRLGPRLAHDVRTGDNRTALAALRRSLRFESGCAMLVLFLVAWLGTLSPLP

Sequences:

>Translated_303_residues
MEADWATIAVRFALYADMMLLFGVPLAAKLWLRVGGRPGWHCGRVAAGAAGAGIVLSVASLVLAVKTMTGVESYGAIDSD
TVWMIATETGFGVAWQVRVFALLACLLATLAPCLRRGRVIQLLAAAIALSTLAWGGHGVMDEGTRHTVHLSADIIHLLAA
GAWVGALVTFVRMSSPDCTATDDGVAELSRAANGFAHIGTGIVVALVLTGTVNYVMIAGPTLSGLLTTRYGALLLAKLAL
FGAMLALAAVNRYRLGPRLAHDVRTGDNRTALAALRRSLRFESGCAMLVLFLVAWLGTLSPLP
>Mature_303_residues
MEADWATIAVRFALYADMMLLFGVPLAAKLWLRVGGRPGWHCGRVAAGAAGAGIVLSVASLVLAVKTMTGVESYGAIDSD
TVWMIATETGFGVAWQVRVFALLACLLATLAPCLRRGRVIQLLAAAIALSTLAWGGHGVMDEGTRHTVHLSADIIHLLAA
GAWVGALVTFVRMSSPDCTATDDGVAELSRAANGFAHIGTGIVVALVLTGTVNYVMIAGPTLSGLLTTRYGALLLAKLAL
FGAMLALAAVNRYRLGPRLAHDVRTGDNRTALAALRRSLRFESGCAMLVLFLVAWLGTLSPLP

Specific function: Exact function not known. Involved in copper resistance. Appears to be involved in copper uptake in conjunction with CopC [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family [H]

Homologues:

Organism=Escherichia coli, GI1788145, Length=306, Percent_Identity=27.4509803921569, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457 [H]

Pfam domain/function: PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 31720; Mature: 31720

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEADWATIAVRFALYADMMLLFGVPLAAKLWLRVGGRPGWHCGRVAAGAAGAGIVLSVAS
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHH
LVLAVKTMTGVESYGAIDSDTVWMIATETGFGVAWQVRVFALLACLLATLAPCLRRGRVI
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QLLAAAIALSTLAWGGHGVMDEGTRHTVHLSADIIHLLAAGAWVGALVTFVRMSSPDCTA
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDDGVAELSRAANGFAHIGTGIVVALVLTGTVNYVMIAGPTLSGLLTTRYGALLLAKLAL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
FGAMLALAAVNRYRLGPRLAHDVRTGDNRTALAALRRSLRFESGCAMLVLFLVAWLGTLS
HHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PLP
CCC
>Mature Secondary Structure
MEADWATIAVRFALYADMMLLFGVPLAAKLWLRVGGRPGWHCGRVAAGAAGAGIVLSVAS
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHH
LVLAVKTMTGVESYGAIDSDTVWMIATETGFGVAWQVRVFALLACLLATLAPCLRRGRVI
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QLLAAAIALSTLAWGGHGVMDEGTRHTVHLSADIIHLLAAGAWVGALVTFVRMSSPDCTA
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDDGVAELSRAANGFAHIGTGIVVALVLTGTVNYVMIAGPTLSGLLTTRYGALLLAKLAL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
FGAMLALAAVNRYRLGPRLAHDVRTGDNRTALAALRRSLRFESGCAMLVLFLVAWLGTLS
HHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PLP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 8449873 [H]