| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is gmk
Identifier: 73542159
GI number: 73542159
Start: 2713555
End: 2714205
Strand: Reverse
Name: gmk
Synonym: Reut_A2473
Alternate gene names: 73542159
Gene position: 2714205-2713555 (Counterclockwise)
Preceding gene: 73542160
Following gene: 73542158
Centisome position: 71.3
GC content: 64.52
Gene sequence:
>651_bases ATGAGCGATACGCCTCACACCGCCATCGATACCGTCTACCCCGGCAACCTGTTCATGGTGGTGGCACCTTCCGGAGCCGG CAAGTCGACGCTGGTCAACGCGCTGCTCGCGCAGGACGCGGCGATCCGCCTGTCGATCTCCCATACCACGCGTGCGCCGC GCCCCGGCGAACAGGATGGGCGCGAGTATCACTTCTGCACAGTGGACTCCTTCCGCGCTGCGCGCGACCGCGGCGAGTTC CTCGAGTGGGCCGAGGTCCACGGCAATTACTACGCGACGTCGCGCGTGTGGATCGAGGAGCAGATGGCGCAGGGCAATGA CGTGCTGCTCGAGATCGACTGGCAGGGCGCGCAACAGGTGCACCAGCGGTTCTCGAACGCGGTCGAGATCTTCATCCTGC CGCCGTCGCTGACTGCGCTGGAAGACCGCCTGAAGAAGCGTGGCCAGGACGAGCCCAACGTGATCGTGCGGCGCCTGCTG GCGGCTGGCAGCGAGATGTCGCATGCGTCCGAATCGGACTACGTCATCATCAACGAGGTCTTCGACAACGCGCTCGAGGA ACTGCGCAACGTGGTGCGTGCCACGCGCCTGCGCTTTTCGTCGCAAAAAGCGCGCCATACCGAGCTCTTCATCGAGCTTG GCATTCACTGA
Upstream 100 bases:
>100_bases TCGAGCAGATGCGCGAGCAGGTCCAGAACCTCGAGTAACGCCCCGTTCAACGCATCCGTTTCACCTGGCGCTACGGCGCC TGAAGAACCAAAGAATTCAC
Downstream 100 bases:
>100_bases GCGCCAGTGCGCGCGGGGGCCCTGCCGGGCGATTCGCGCGCGGTGCTGTAAAATAGCAACCCAACAGGTTTTGTCCCAAG GTGGATTTGATATGGCGCGT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSDTPHTAIDTVYPGNLFMVVAPSGAGKSTLVNALLAQDAAIRLSISHTTRAPRPGEQDGREYHFCTVDSFRAARDRGEF LEWAEVHGNYYATSRVWIEEQMAQGNDVLLEIDWQGAQQVHQRFSNAVEIFILPPSLTALEDRLKKRGQDEPNVIVRRLL AAGSEMSHASESDYVIINEVFDNALEELRNVVRATRLRFSSQKARHTELFIELGIH
Sequences:
>Translated_216_residues MSDTPHTAIDTVYPGNLFMVVAPSGAGKSTLVNALLAQDAAIRLSISHTTRAPRPGEQDGREYHFCTVDSFRAARDRGEF LEWAEVHGNYYATSRVWIEEQMAQGNDVLLEIDWQGAQQVHQRFSNAVEIFILPPSLTALEDRLKKRGQDEPNVIVRRLL AAGSEMSHASESDYVIINEVFDNALEELRNVVRATRLRFSSQKARHTELFIELGIH >Mature_215_residues SDTPHTAIDTVYPGNLFMVVAPSGAGKSTLVNALLAQDAAIRLSISHTTRAPRPGEQDGREYHFCTVDSFRAARDRGEFL EWAEVHGNYYATSRVWIEEQMAQGNDVLLEIDWQGAQQVHQRFSNAVEIFILPPSLTALEDRLKKRGQDEPNVIVRRLLA AGSEMSHASESDYVIINEVFDNALEELRNVVRATRLRFSSQKARHTELFIELGIH
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=178, Percent_Identity=38.7640449438202, Blast_Score=128, Evalue=4e-30, Organism=Homo sapiens, GI4504221, Length=178, Percent_Identity=38.7640449438202, Blast_Score=128, Evalue=4e-30, Organism=Homo sapiens, GI226874831, Length=178, Percent_Identity=38.7640449438202, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI38570142, Length=178, Percent_Identity=27.5280898876405, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI4505237, Length=173, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI262118259, Length=173, Percent_Identity=26.5895953757225, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI262118255, Length=173, Percent_Identity=25.4335260115607, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI262118263, Length=173, Percent_Identity=26.5895953757225, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1790080, Length=201, Percent_Identity=52.7363184079602, Blast_Score=211, Evalue=4e-56, Organism=Caenorhabditis elegans, GI193203132, Length=185, Percent_Identity=32.4324324324324, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17508835, Length=185, Percent_Identity=32.4324324324324, Blast_Score=103, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=37.9120879120879, Blast_Score=132, Evalue=5e-32, Organism=Drosophila melanogaster, GI21356141, Length=179, Percent_Identity=40.7821229050279, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_CUPPJ (Q46YE8)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296679.1 - HSSP: P60546 - ProteinModelPortal: Q46YE8 - SMR: Q46YE8 - GeneID: 3612196 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A2473 - NMPDR: fig|264198.3.peg.3244 - HOGENOM: HBG671982 - OMA: PPTWEEL - ProtClustDB: PRK00300 - BioCyc: REUT264198:REUT_A2473-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 24318; Mature: 24186
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPHTAIDTVYPGNLFMVVAPSGAGKSTLVNALLAQDAAIRLSISHTTRAPRPGEQDG CCCCCCCCCCEECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC REYHFCTVDSFRAARDRGEFLEWAEVHGNYYATSRVWIEEQMAQGNDVLLEIDWQGAQQV CEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEHEEHHHHHHCCCCCEEEEEECCCHHHH HQRFSNAVEIFILPPSLTALEDRLKKRGQDEPNVIVRRLLAAGSEMSHASESDYVIINEV HHHHCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHH FDNALEELRNVVRATRLRFSSQKARHTELFIELGIH HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCC >Mature Secondary Structure SDTPHTAIDTVYPGNLFMVVAPSGAGKSTLVNALLAQDAAIRLSISHTTRAPRPGEQDG CCCCCCCCCEECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC REYHFCTVDSFRAARDRGEFLEWAEVHGNYYATSRVWIEEQMAQGNDVLLEIDWQGAQQV CEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEHEEHHHHHHCCCCCEEEEEECCCHHHH HQRFSNAVEIFILPPSLTALEDRLKKRGQDEPNVIVRRLLAAGSEMSHASESDYVIINEV HHHHCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHH FDNALEELRNVVRATRLRFSSQKARHTELFIELGIH HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA