| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73542034
Identifier: 73542034
GI number: 73542034
Start: 2588962
End: 2589417
Strand: Direct
Name: 73542034
Synonym: Reut_A2348
Alternate gene names: NA
Gene position: 2588962-2589417 (Clockwise)
Preceding gene: 73542033
Following gene: 73542035
Centisome position: 68.01
GC content: 62.94
Gene sequence:
>456_bases ATGTCCGTTTATGACACCCTTGCACGCCTCGGCGTGGAACTGCCCACCGCCGGCGCCCCTGCCGCCGCCTACGTCATGGC CGCGCAGACCGGCAATACCGTTTTCCTGTCGGGCCACATCGCCCGCAAGGACGGCAAGGTATGGGCTGGCAAGCTGGGCA AGGACATCGACACCGAGTCCGGCAAGGCCGCCGCACGTTTGATCGCGATCGACCTGCTGGCCACGCTGCACGCGCATATT GGCGACCTGAACCGCGTCACGCGCATCGTCAAGGTGATGAGCCTCGTGAACTCGACGCAGGAATACACCGAACAGCATCT GGTCACGAACGGTTGTTCGGAATTCCTGGCTGAAGTGTTCGGTGACAAGGGCAAGCACGCACGCAGCGCGTTCGGCGTCG CGCAGATTCCGCTCGGCGCCTGCGTCGAGATCGAGATGATCGTCGAAGTGAACTGA
Upstream 100 bases:
>100_bases CCGCCGTGCAACAAGCGGCCCCCATGACAAATGCGGGCACCGGACCCGCTGCGAAAACTACCCCCGTCCTCACCGAACGC CCTCACTGACAGGAGATCAC
Downstream 100 bases:
>100_bases CGGACGGCCGTTCCGCCATGCGCATCGACAACCTGCCTTTCGGCACGACCGACTGGTCCGCCGTCGAGCCCACGCGCCAT CCCGGCGAACGGGGCGAGGC
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Transcriptional Regulator; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSVYDTLARLGVELPTAGAPAAAYVMAAQTGNTVFLSGHIARKDGKVWAGKLGKDIDTESGKAAARLIAIDLLATLHAHI GDLNRVTRIVKVMSLVNSTQEYTEQHLVTNGCSEFLAEVFGDKGKHARSAFGVAQIPLGACVEIEMIVEVN
Sequences:
>Translated_151_residues MSVYDTLARLGVELPTAGAPAAAYVMAAQTGNTVFLSGHIARKDGKVWAGKLGKDIDTESGKAAARLIAIDLLATLHAHI GDLNRVTRIVKVMSLVNSTQEYTEQHLVTNGCSEFLAEVFGDKGKHARSAFGVAQIPLGACVEIEMIVEVN >Mature_150_residues SVYDTLARLGVELPTAGAPAAAYVMAAQTGNTVFLSGHIARKDGKVWAGKLGKDIDTESGKAAARLIAIDLLATLHAHIG DLNRVTRIVKVMSLVNSTQEYTEQHLVTNGCSEFLAEVFGDKGKHARSAFGVAQIPLGACVEIEMIVEVN
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16006; Mature: 15874
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVYDTLARLGVELPTAGAPAAAYVMAAQTGNTVFLSGHIARKDGKVWAGKLGKDIDTES CCHHHHHHHCCCCCCCCCCCHHHEEEEECCCCEEEEECEEECCCCCEEECCCCCCCCCCC GKAAARLIAIDLLATLHAHIGDLNRVTRIVKVMSLVNSTQEYTEQHLVTNGCSEFLAEVF CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDKGKHARSAFGVAQIPLGACVEIEMIVEVN CCCCCHHHHHCCHHHCCCCCEEEEEEEEEEC >Mature Secondary Structure SVYDTLARLGVELPTAGAPAAAYVMAAQTGNTVFLSGHIARKDGKVWAGKLGKDIDTES CHHHHHHHCCCCCCCCCCCHHHEEEEECCCCEEEEECEEECCCCCEEECCCCCCCCCCC GKAAARLIAIDLLATLHAHIGDLNRVTRIVKVMSLVNSTQEYTEQHLVTNGCSEFLAEVF CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDKGKHARSAFGVAQIPLGACVEIEMIVEVN CCCCCHHHHHCCHHHCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA