| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is gsiB [H]
Identifier: 73542021
GI number: 73542021
Start: 2575586
End: 2577181
Strand: Direct
Name: gsiB [H]
Synonym: Reut_A2335
Alternate gene names: 73542021
Gene position: 2575586-2577181 (Clockwise)
Preceding gene: 73542019
Following gene: 73542025
Centisome position: 67.66
GC content: 64.54
Gene sequence:
>1596_bases ATGAATTCCCGCCGCCCGTCCATCGTTTCCGGAGTCGCCCGCACCGCACTGCTGTGCGGCGCCTTGTTCGCGTTGTCGCC GGTTGGCAGCGCATACGCCGAAGACCTGCGCGTCGGCCTGGCGGCCGATGTCACCTCCATGGACCCGCACTGGAACAATG CCGGGCCGAACAATGCCATCGCGCTGCATATCTTCGAGTCGCTCGTGTTCATGGACAAGAATGCACGCTATATCCCGGGG CTCGCGCTGTCGTGGAAGCCCGTCAACCCGACCACGTGGGAAATCAAGCTGCGGCCGAACGTCAAATGGCACGACGGCTC GCCGTTTACGAGCGCGGACGTCAAGGCATCGCTCGAGCGGCCCGAGAAGCTGACCAACAGCCCCGGCTCGTTCACGAGCT ACACCAAGCCGATCGCGCGCATCGACACGCCCGACGCGCTCACGGTGCGGCTGACCATGAACGTGGCCAACTATGCCAAC CTGGCCAATGACCTGAACAGCGTGCCGATCATGCCGAAGAAGGTCGCCGCGACGCTTACGCAGGCCGATTTCGATTCCGG CAAGGCCATGATCGGCACTGGCCCGTTCAAGTTCGTGCGCTTCGCCCGCGGCCAGGAAATTGTGATGGCGCGCAATCCCG ACTACTGGGGCGCCAAGCCTGAGTGGGATCGAGCCATCTTCCGCATCATCACCGACAACGGCGCCCGCACCTCCGCCCTG CTCGCCGGCGATGTCGACGTGATCGAAAGCGTGCCCGCCGCCGACGTGGCCAAGCTCAAGCAGAACCCGAAATTCCGCAT CGAGCAGACCGTGTCATGGCGCACGATCTTCTGGCAGATGGACCAGTCGCGCGACAACCCGCCCTACGTCACCGACAAGG CCGGCAAGCCGCTGGGCAAGAACCCGTTCAAGGATGCACGCGTACGCGCGGCAATCTCCAAGGCCCTCAACCGCGACGCG ATCGTCAGCCGCATCATGGAAGGCCTTGCGGTGCCGGCCTCTTCGCTGGTGTCGCCGCAGATCTTCGGGCACCCCGGCAC CAAACCCGACGCCTACGATCCGGAAGGCGCGAAGAAACTGCTCGCCGCCGCCGGCTATCCGAACGGTTTCGGGCTGACGC TGCACGCAACCAACAACCGCTACCTGAACGATGCCGCCGTGGCGCAGGCTACCGCGAGCATGCTAACGCGCGTAGGCATC CAGACCAAGGTGGAAACCTTGCCCGTGGCCGCGTACTTCACGCGCGCGCGCCAGGGCGATTTCTCGTTCGAGATGCTGGG ATGGGGTTCCGCCGCCGCCGACGTGGCGCTGCGCTCGATCGCCGGCACGCCTGACCCCAAGACCGGCTACGGTACGTGGA ACTGGGGCAAGTACAGCAATCCGCAGTTGGACAAGCTGATCGAGAAATCACTGACCACCGTCAGCAGCGACAAGGCGCGC GAGGATAACGCCAAGGCCGCCGCGAAGTTCGCGCTGGACGACCATGCGGTCATCCCGTCGCATAGCCAGCTCGCGATGTG GGCGATGAAGACCGGCCTGAAGTACGAGGCGCGCACCGACGAATGGTCGCTGGCGCAGTTCTTCCACAAGCAGTAA
Upstream 100 bases:
>100_bases ACAATGCGGGCAAATTGCCTGACAACCGCTTGAGAACAGCCCATGGCCGCGCGCCCTCCTCGCCCGCGGCCGCCCGGGCC AGCATGAGGAGCCTAGCGCC
Downstream 100 bases:
>100_bases CGGCCGCGAGCCCGGAGCCTGGCTCCGGGCAGCGGACCGATCAGATCACCAGCTTTTCTTCCTGCCGCGCATTGGCGGCA CGCAGCTTCTTCACCCAGTC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MNSRRPSIVSGVARTALLCGALFALSPVGSAYAEDLRVGLAADVTSMDPHWNNAGPNNAIALHIFESLVFMDKNARYIPG LALSWKPVNPTTWEIKLRPNVKWHDGSPFTSADVKASLERPEKLTNSPGSFTSYTKPIARIDTPDALTVRLTMNVANYAN LANDLNSVPIMPKKVAATLTQADFDSGKAMIGTGPFKFVRFARGQEIVMARNPDYWGAKPEWDRAIFRIITDNGARTSAL LAGDVDVIESVPAADVAKLKQNPKFRIEQTVSWRTIFWQMDQSRDNPPYVTDKAGKPLGKNPFKDARVRAAISKALNRDA IVSRIMEGLAVPASSLVSPQIFGHPGTKPDAYDPEGAKKLLAAAGYPNGFGLTLHATNNRYLNDAAVAQATASMLTRVGI QTKVETLPVAAYFTRARQGDFSFEMLGWGSAAADVALRSIAGTPDPKTGYGTWNWGKYSNPQLDKLIEKSLTTVSSDKAR EDNAKAAAKFALDDHAVIPSHSQLAMWAMKTGLKYEARTDEWSLAQFFHKQ
Sequences:
>Translated_531_residues MNSRRPSIVSGVARTALLCGALFALSPVGSAYAEDLRVGLAADVTSMDPHWNNAGPNNAIALHIFESLVFMDKNARYIPG LALSWKPVNPTTWEIKLRPNVKWHDGSPFTSADVKASLERPEKLTNSPGSFTSYTKPIARIDTPDALTVRLTMNVANYAN LANDLNSVPIMPKKVAATLTQADFDSGKAMIGTGPFKFVRFARGQEIVMARNPDYWGAKPEWDRAIFRIITDNGARTSAL LAGDVDVIESVPAADVAKLKQNPKFRIEQTVSWRTIFWQMDQSRDNPPYVTDKAGKPLGKNPFKDARVRAAISKALNRDA IVSRIMEGLAVPASSLVSPQIFGHPGTKPDAYDPEGAKKLLAAAGYPNGFGLTLHATNNRYLNDAAVAQATASMLTRVGI QTKVETLPVAAYFTRARQGDFSFEMLGWGSAAADVALRSIAGTPDPKTGYGTWNWGKYSNPQLDKLIEKSLTTVSSDKAR EDNAKAAAKFALDDHAVIPSHSQLAMWAMKTGLKYEARTDEWSLAQFFHKQ >Mature_531_residues MNSRRPSIVSGVARTALLCGALFALSPVGSAYAEDLRVGLAADVTSMDPHWNNAGPNNAIALHIFESLVFMDKNARYIPG LALSWKPVNPTTWEIKLRPNVKWHDGSPFTSADVKASLERPEKLTNSPGSFTSYTKPIARIDTPDALTVRLTMNVANYAN LANDLNSVPIMPKKVAATLTQADFDSGKAMIGTGPFKFVRFARGQEIVMARNPDYWGAKPEWDRAIFRIITDNGARTSAL LAGDVDVIESVPAADVAKLKQNPKFRIEQTVSWRTIFWQMDQSRDNPPYVTDKAGKPLGKNPFKDARVRAAISKALNRDA IVSRIMEGLAVPASSLVSPQIFGHPGTKPDAYDPEGAKKLLAAAGYPNGFGLTLHATNNRYLNDAAVAQATASMLTRVGI QTKVETLPVAAYFTRARQGDFSFEMLGWGSAAADVALRSIAGTPDPKTGYGTWNWGKYSNPQLDKLIEKSLTTVSSDKAR EDNAKAAAKFALDDHAVIPSHSQLAMWAMKTGLKYEARTDEWSLAQFFHKQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=537, Percent_Identity=27.56052141527, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI1789966, Length=526, Percent_Identity=26.8060836501901, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1787762, Length=509, Percent_Identity=27.7013752455796, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1787495, Length=538, Percent_Identity=24.907063197026, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI87081878, Length=533, Percent_Identity=24.765478424015, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789887, Length=438, Percent_Identity=23.7442922374429, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1789397, Length=527, Percent_Identity=23.9089184060721, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1787551, Length=497, Percent_Identity=23.5412474849095, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 57926; Mature: 57926
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRRPSIVSGVARTALLCGALFALSPVGSAYAEDLRVGLAADVTSMDPHWNNAGPNNAI CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEE ALHIFESLVFMDKNARYIPGLALSWKPVNPTTWEIKLRPNVKWHDGSPFTSADVKASLER EHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHC PEKLTNSPGSFTSYTKPIARIDTPDALTVRLTMNVANYANLANDLNSVPIMPKKVAATLT CHHHCCCCCCCCHHCCCHHHCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHH QADFDSGKAMIGTGPFKFVRFARGQEIVMARNPDYWGAKPEWDRAIFRIITDNGARTSAL HCCCCCCCEEEECCHHHHHHHCCCCEEEEECCCCCCCCCCCHHCEEEEEEECCCCCEEEE LAGDVDVIESVPAADVAKLKQNPKFRIEQTVSWRTIFWQMDQSRDNPPYVTDKAGKPLGK EECCHHHHHCCCCHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCEEECCCCCCCCC NPFKDARVRAAISKALNRDAIVSRIMEGLAVPASSLVSPQIFGHPGTKPDAYDPEGAKKL CCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCCCHHHHHH LAAAGYPNGFGLTLHATNNRYLNDAAVAQATASMLTRVGIQTKVETLPVAAYFTRARQGD HHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC FSFEMLGWGSAAADVALRSIAGTPDPKTGYGTWNWGKYSNPQLDKLIEKSLTTVSSDKAR CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC EDNAKAAAKFALDDHAVIPSHSQLAMWAMKTGLKYEARTDEWSLAQFFHKQ CCCHHHHHEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHCC >Mature Secondary Structure MNSRRPSIVSGVARTALLCGALFALSPVGSAYAEDLRVGLAADVTSMDPHWNNAGPNNAI CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEE ALHIFESLVFMDKNARYIPGLALSWKPVNPTTWEIKLRPNVKWHDGSPFTSADVKASLER EHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCHHHHHHHHC PEKLTNSPGSFTSYTKPIARIDTPDALTVRLTMNVANYANLANDLNSVPIMPKKVAATLT CHHHCCCCCCCCHHCCCHHHCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHH QADFDSGKAMIGTGPFKFVRFARGQEIVMARNPDYWGAKPEWDRAIFRIITDNGARTSAL HCCCCCCCEEEECCHHHHHHHCCCCEEEEECCCCCCCCCCCHHCEEEEEEECCCCCEEEE LAGDVDVIESVPAADVAKLKQNPKFRIEQTVSWRTIFWQMDQSRDNPPYVTDKAGKPLGK EECCHHHHHCCCCHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCEEECCCCCCCCC NPFKDARVRAAISKALNRDAIVSRIMEGLAVPASSLVSPQIFGHPGTKPDAYDPEGAKKL CCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCCCHHHHHH LAAAGYPNGFGLTLHATNNRYLNDAAVAQATASMLTRVGIQTKVETLPVAAYFTRARQGD HHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC FSFEMLGWGSAAADVALRSIAGTPDPKTGYGTWNWGKYSNPQLDKLIEKSLTTVSSDKAR CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC EDNAKAAAKFALDDHAVIPSHSQLAMWAMKTGLKYEARTDEWSLAQFFHKQ CCCHHHHHEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA