| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is livM [H]
Identifier: 73542003
GI number: 73542003
Start: 2555439
End: 2556716
Strand: Reverse
Name: livM [H]
Synonym: Reut_A2317
Alternate gene names: 73542003
Gene position: 2556716-2555439 (Counterclockwise)
Preceding gene: 73542004
Following gene: 73542002
Centisome position: 67.17
GC content: 65.96
Gene sequence:
>1278_bases ATGACAAACCGGACTTCTGCAATGCCCGCAAACCGGGCTTCTGCCCTGCCCGCAGGGCAATCCCTGAAGAATGCCGTGGT GGCCGCGGTGATGACGGCCATCCTGACCATTCCCGTGCTCGGCCTGCAACTCAAGCTGGACGGCTACAAGGTCGTGCTGG AGTCGCACTGGCGGCCGGTGTGGATCGCCGTGGCGGCGGTCTTCCTGTTCCAGCTGTTCAAGCCGCTGCTGTCGCGTGCC GGCAGCGCCGTGCGCATGCCGGCCATGCCGCAACTCGGCGTCGGCCAGCAGCGCGCGGCGGTGTGGGTGCTGCTGGCCGT GGGCCTCGTGTGGCCTTTCTTCGGCTCGCGCGGTGCGGTGGATGTGGCGACGCTTGCGTTGATCTACGTGATTCTCGGGC TTGGCCTGAATATCGTGGTCGGCTTCGCCGGACTGCTGGACCTTGGCTACGTGGGCTTCTACGCCGTGGGTGGCTATACC TACGCCATGCTGAACCAGTACTTCGGCCTCGGCTTCTGGGAATGCCTGCCGATTGCTGCAGCGATGTCTGCCACCTTCGG CTTCCTGCTCGGCTTCCCTGTGCTGCGCCTGCGCGGTGACTACCTGGCCATCGTGACGCTGGGCTTCGGCGAGATCATCC GCCTGCTCGCGCGCAACCTGACCGAGTACACCGGCGGCCCGGACGGAATCTCGGGCATTCCGAAGCCCACTGTATTCGGC TTCGAGATGGCGCGCAGCGCCACCGTCGAAGGCGCACGCACTTTCCATGAGCTGATCGGGCTGGACTACAAGGGCGAGCA CATGGTGATCTTCCTGTACCTGCTCGCGCTGCTGCTGGTGGGCTTCACGCTGTTCGTAACCAGCCGCCTGATCCGCATGC CGATGGGCCGTGCGTGGGAAGCGCTGCGCGAGGACGAGATCGCGTGCCGATCGCTGGGCATGAACCCGACCCGCATCAAG CTGTCGGCGTTCACGCTGGGGGCGGCGTTCGCGGGCATCGGCGGCGCGTTCTTCGCGGCCCGCCAGGGACTGGTCAATCC GGAATCGTTCACCTTCATCGAATCGGCGCTGGTGCTGGCCGTGGTGGTGCTGGGCGGCATGGGTTCGCAGCTGGGCGTGA TCCTCGCCGCGATCCTGCTGACCGTGCTGCCCGAAGTGGCGCGCGGTTTCGCCGAATACCGCATGCTGATTTTCGGCCTG GTGATGGTGCTGATGATGATGTGGCGTCCGCAGGGCCTGCTGCCCGCGAGCCGTCCGCACGTGGAGCTTCCCCGATGA
Upstream 100 bases:
>100_bases GGACGTGGTGGCCTTCAGCCTGCTGGTGCTGGTGCTGCTGTTCCGCCCGACCGGCCTGCTCGGCAAGCCAGACGTGGAAA AGGTCTGAGGGAGACGCGAC
Downstream 100 bases:
>100_bases GTACGGCGATGAATGCAAATGCGGAATTGCTGAAAGTTTCCGGCCTGCAGATGCGCTTCGGCGGCCTGCTGGCGGTGGAT GGCATCGAGTTCGATGTCAT
Product: leucine/isoleucine/valine transporter permease subunit
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTNRTSAMPANRASALPAGQSLKNAVVAAVMTAILTIPVLGLQLKLDGYKVVLESHWRPVWIAVAAVFLFQLFKPLLSRA GSAVRMPAMPQLGVGQQRAAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGYT YAMLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLARNLTEYTGGPDGISGIPKPTVFG FEMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALLLVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGMNPTRIK LSAFTLGAAFAGIGGAFFAARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEYRMLIFGL VMVLMMMWRPQGLLPASRPHVELPR
Sequences:
>Translated_425_residues MTNRTSAMPANRASALPAGQSLKNAVVAAVMTAILTIPVLGLQLKLDGYKVVLESHWRPVWIAVAAVFLFQLFKPLLSRA GSAVRMPAMPQLGVGQQRAAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGYT YAMLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLARNLTEYTGGPDGISGIPKPTVFG FEMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALLLVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGMNPTRIK LSAFTLGAAFAGIGGAFFAARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEYRMLIFGL VMVLMMMWRPQGLLPASRPHVELPR >Mature_424_residues TNRTSAMPANRASALPAGQSLKNAVVAAVMTAILTIPVLGLQLKLDGYKVVLESHWRPVWIAVAAVFLFQLFKPLLSRAG SAVRMPAMPQLGVGQQRAAVWVLLAVGLVWPFFGSRGAVDVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGYTY AMLNQYFGLGFWECLPIAAAMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLARNLTEYTGGPDGISGIPKPTVFGF EMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALLLVGFTLFVTSRLIRMPMGRAWEALREDEIACRSLGMNPTRIKL SAFTLGAAFAGIGGAFFAARQGLVNPESFTFIESALVLAVVVLGGMGSQLGVILAAILLTVLPEVARGFAEYRMLIFGLV MVLMMMWRPQGLLPASRPHVELPR
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=410, Percent_Identity=60.7317073170732, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 45795; Mature: 45664
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRTSAMPANRASALPAGQSLKNAVVAAVMTAILTIPVLGLQLKLDGYKVVLESHWRPV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEHHCCCCHH WIAVAAVFLFQLFKPLLSRAGSAVRMPAMPQLGVGQQRAAVWVLLAVGLVWPFFGSRGAV HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH DVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGYTYAMLNQYFGLGFWECLPIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLARNLTEYTGGPDGISGIPKPTVFG HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH FEMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALLLVGFTLFVTSRLIRMPMGRAWE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALREDEIACRSLGMNPTRIKLSAFTLGAAFAGIGGAFFAARQGLVNPESFTFIESALVLA HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVVLGGMGSQLGVILAAILLTVLPEVARGFAEYRMLIFGLVMVLMMMWRPQGLLPASRPH HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VELPR CCCCC >Mature Secondary Structure TNRTSAMPANRASALPAGQSLKNAVVAAVMTAILTIPVLGLQLKLDGYKVVLESHWRPV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEHHCCCCHH WIAVAAVFLFQLFKPLLSRAGSAVRMPAMPQLGVGQQRAAVWVLLAVGLVWPFFGSRGAV HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH DVATLALIYVILGLGLNIVVGFAGLLDLGYVGFYAVGGYTYAMLNQYFGLGFWECLPIAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AMSATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLLARNLTEYTGGPDGISGIPKPTVFG HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH FEMARSATVEGARTFHELIGLDYKGEHMVIFLYLLALLLVGFTLFVTSRLIRMPMGRAWE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALREDEIACRSLGMNPTRIKLSAFTLGAAFAGIGGAFFAARQGLVNPESFTFIESALVLA HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVVLGGMGSQLGVILAAILLTVLPEVARGFAEYRMLIFGLVMVLMMMWRPQGLLPASRPH HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VELPR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]