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The map label for this gene is nodJ [H]

Identifier: 73541982

GI number: 73541982

Start: 2532802

End: 2533671

Strand: Direct

Name: nodJ [H]

Synonym: Reut_A2296

Alternate gene names: 73541982

Gene position: 2532802-2533671 (Clockwise)

Preceding gene: 73541981

Following gene: 73541983

Centisome position: 66.54

GC content: 64.83

Gene sequence:

>870_bases
ATGAGCGAACAGGATCCGCGTCCGGACACGGCAACTGCCGCAGCGACGCAAACCCGCACCCGCAACGGCAGCGCCGCATC
GGCACAGCACTATCCGCAGCCACTGCTGCCGCGCAATCTGCGCAACTGGATGATGGTCTGGTACCGCAACTACATGGTGT
GGAAGAAGCTGGCCATCCCGTCAATGATCGGCAACCTGGCCGATCCGATGATCTACCTGTTCGGCCTTGGCCTCGGACTC
GGCCTGCTGGTCGGGCAAGTGCACGGCGTGTCGTACATCGCCTTCCTCGCCGCCGGCACCACGGCATCGAGCGTGATGAT
GTCGGCGAGCTTCGAATCGATGTACTCGGCGTTCTCGCGCATGCACGTGCAGCGCACGTGGGAAGCGATCATGCATGCGC
CGCTGACGCTCGGCGACGTGGTGCTCGGAGAGATCCTGTGGGCCGCCAGCAAGGCGGTGCTGTCGGGGCTGGCGATCATG
CTCGTGGCCGGGGCGCTCGGCTATGCGCACATGCCGGGCGCGCTGCTGGCACTGCCGGTGATCGTGCTGGCGGGCATCAC
GTTCGCGAGCCTGGCGATGATCGTCACGGCGCTGGCCCCCGGCTATGACTTCTTCATGTTCTACCAGACGCTGGTGATGA
CGCCAATGCTGCTGCTCTCGGGCGTGTTCTTCCCGCTCGAACAGTTGCCCGAAGGCGCTCGCGCGGCGACCAATGTCCTG
CCGCTCGCGCATGCGGTTGCACTGATCCGTCCGCTGATGCTGGGGCGGCCGATCGACAATGCCGGGTTGCATATTGCCGT
GCTGATGGCCTACGGTATTGTTGCCCTGGTGCTTTCGCTGGTACTGTTGCGGCGCCGCTTGCTGCGATGA

Upstream 100 bases:

>100_bases
GCCGCCCTGCATGGCCAGAGCGGCGTACGCTACCTGCACCGTCCGGCCAACCTCGAGGACGTGTTCCTCAAGCTGACCGG
CCGCGAGATGAGGGACTGAC

Downstream 100 bases:

>100_bases
GCTTCGCAGGCGGCCGGTTGCCGGGGCCCGATGTCCTGGCGCCTATTTACGTGCCCACCGGGCAGCCTTGCATGCCGTTT
TCGTTTTCCGGTTTTCCCCG

Product: ABC-2 type transporter, NodJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSEQDPRPDTATAAATQTRTRNGSAASAQHYPQPLLPRNLRNWMMVWYRNYMVWKKLAIPSMIGNLADPMIYLFGLGLGL
GLLVGQVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQRTWEAIMHAPLTLGDVVLGEILWAASKAVLSGLAIM
LVAGALGYAHMPGALLALPVIVLAGITFASLAMIVTALAPGYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGARAATNVL
PLAHAVALIRPLMLGRPIDNAGLHIAVLMAYGIVALVLSLVLLRRRLLR

Sequences:

>Translated_289_residues
MSEQDPRPDTATAAATQTRTRNGSAASAQHYPQPLLPRNLRNWMMVWYRNYMVWKKLAIPSMIGNLADPMIYLFGLGLGL
GLLVGQVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQRTWEAIMHAPLTLGDVVLGEILWAASKAVLSGLAIM
LVAGALGYAHMPGALLALPVIVLAGITFASLAMIVTALAPGYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGARAATNVL
PLAHAVALIRPLMLGRPIDNAGLHIAVLMAYGIVALVLSLVLLRRRLLR
>Mature_288_residues
SEQDPRPDTATAAATQTRTRNGSAASAQHYPQPLLPRNLRNWMMVWYRNYMVWKKLAIPSMIGNLADPMIYLFGLGLGLG
LLVGQVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSRMHVQRTWEAIMHAPLTLGDVVLGEILWAASKAVLSGLAIML
VAGALGYAHMPGALLALPVIVLAGITFASLAMIVTALAPGYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGARAATNVLP
LAHAVALIRPLMLGRPIDNAGLHIAVLMAYGIVALVLSLVLLRRRLLR

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 31209; Mature: 31078

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEQDPRPDTATAAATQTRTRNGSAASAQHYPQPLLPRNLRNWMMVWYRNYMVWKKLAIP
CCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SMIGNLADPMIYLFGLGLGLGLLVGQVHGVSYIAFLAAGTTASSVMMSASFESMYSAFSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
MHVQRTWEAIMHAPLTLGDVVLGEILWAASKAVLSGLAIMLVAGALGYAHMPGALLALPV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVLAGITFASLAMIVTALAPGYDFFMFYQTLVMTPMLLLSGVFFPLEQLPEGARAATNVL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PLAHAVALIRPLMLGRPIDNAGLHIAVLMAYGIVALVLSLVLLRRRLLR
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]