| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yceD [C]
Identifier: 73541955
GI number: 73541955
Start: 2499868
End: 2500473
Strand: Reverse
Name: yceD [C]
Synonym: Reut_A2268
Alternate gene names: 73541955
Gene position: 2500473-2499868 (Counterclockwise)
Preceding gene: 73541958
Following gene: 73541954
Centisome position: 65.69
GC content: 63.7
Gene sequence:
>606_bases ATGAGCAGCAATATGACCCAGCCGATCGACCTGCGCGAGCTAGATCTCTTTGCGTTCTGCCGCAAAGGCAGCAGCGCAGC CGGCGAGGTGGCGGTGCGGGATTTGCCGCGCATCTTAGCCGAGACGGCCGCGCAAGCGCCAGCTTCTGCGCCCGACGAGG TATTCACCTATACGGCTACCGGCTTCGTGCATGAAGAGGCCACCGAGCCCGGCGCGCCGATGGTGCAGCGCTTGTTCCTG GAACTCGCAGTGAATGGCCAGGTCTGGCTGGATTGCCAGCGTTGCCTGGCGGCCTATGCCGAGCCTGTTGCCACGTCAAT GCGCTTCGAGGTTTTCTCCAGCGAGGAAGCGGCCGATGCCGCGCCGATGGATGACGACGAGCTCGATGCAATCGCTGGCT CGAAGCGGTTTTCGTTGCTGGAACTGATTGAAGATGAGGTGTTGCTGGCATTGCCGGCGGCACCCAAGCATGCCGTCTGC CCGACCGTGCACGAGAGTCTCGTGACGGGCGTGGACGGCGAGGTGGAGCCTGAGGCTGCACCCGAAGAAGAGGAAAAGCG GCCATCGCCCTTCGCGGCGCTGGCCGGCCTGAAGACCAAGCACTGA
Upstream 100 bases:
>100_bases CAGGGCAGATTTCATCTTATAATCGCGCGTTTAGCTGCATCCGAATATCGGTTGCCTTGTTGCCGGTCAGGCGGCGGGCC CTGGGTGTGGCGAGCCAAGC
Downstream 100 bases:
>100_bases TGCCGCGATGCGGCACGACGCAAGGTCTTGCAGGTAGTGGTTGAAGCATCCGGCCGGGCCCCGGCTACGCCTAGTGCAGG GTGCGTGTGTTAATATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSSNMTQPIDLRELDLFAFCRKGSSAAGEVAVRDLPRILAETAAQAPASAPDEVFTYTATGFVHEEATEPGAPMVQRLFL ELAVNGQVWLDCQRCLAAYAEPVATSMRFEVFSSEEAADAAPMDDDELDAIAGSKRFSLLELIEDEVLLALPAAPKHAVC PTVHESLVTGVDGEVEPEAAPEEEEKRPSPFAALAGLKTKH
Sequences:
>Translated_201_residues MSSNMTQPIDLRELDLFAFCRKGSSAAGEVAVRDLPRILAETAAQAPASAPDEVFTYTATGFVHEEATEPGAPMVQRLFL ELAVNGQVWLDCQRCLAAYAEPVATSMRFEVFSSEEAADAAPMDDDELDAIAGSKRFSLLELIEDEVLLALPAAPKHAVC PTVHESLVTGVDGEVEPEAAPEEEEKRPSPFAALAGLKTKH >Mature_200_residues SSNMTQPIDLRELDLFAFCRKGSSAAGEVAVRDLPRILAETAAQAPASAPDEVFTYTATGFVHEEATEPGAPMVQRLFLE LAVNGQVWLDCQRCLAAYAEPVATSMRFEVFSSEEAADAAPMDDDELDAIAGSKRFSLLELIEDEVLLALPAAPKHAVCP TVHESLVTGVDGEVEPEAAPEEEEKRPSPFAALAGLKTKH
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21570; Mature: 21439
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNMTQPIDLRELDLFAFCRKGSSAAGEVAVRDLPRILAETAAQAPASAPDEVFTYTAT CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC GFVHEEATEPGAPMVQRLFLELAVNGQVWLDCQRCLAAYAEPVATSMRFEVFSSEEAADA CEEECCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APMDDDELDAIAGSKRFSLLELIEDEVLLALPAAPKHAVCPTVHESLVTGVDGEVEPEAA CCCCCHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCC PEEEEKRPSPFAALAGLKTKH CCHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure SSNMTQPIDLRELDLFAFCRKGSSAAGEVAVRDLPRILAETAAQAPASAPDEVFTYTAT CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC GFVHEEATEPGAPMVQRLFLELAVNGQVWLDCQRCLAAYAEPVATSMRFEVFSSEEAADA CEEECCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APMDDDELDAIAGSKRFSLLELIEDEVLLALPAAPKHAVCPTVHESLVTGVDGEVEPEAA CCCCCHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCC PEEEEKRPSPFAALAGLKTKH CCHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA