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The map label for this gene is yeiE [H]

Identifier: 73541929

GI number: 73541929

Start: 2474216

End: 2475127

Strand: Direct

Name: yeiE [H]

Synonym: Reut_A2242

Alternate gene names: 73541929

Gene position: 2474216-2475127 (Clockwise)

Preceding gene: 73541925

Following gene: 73541932

Centisome position: 65.0

GC content: 65.79

Gene sequence:

>912_bases
ATGGACCAGCGCCCTCTTCGCCTGACATTGCGCCAGCTGCAAGTCTTCGTGTCCGTGGCCCAGCACGGCAGCACGGTGGC
CGCGTCGGAAGCGCTGGCCATGTCGCAGTCAGCTGTCAGCGCGTCGCTGGCGGAACTGGAACGTGCGCTCGACGGCCCCT
TGTTCGACCGCGTGGCGCGGCGCCTGAGCATCAACGAGACTGGACGCCAGTTCTTTCCGCGCGCCTTGTCGCTGCTCGAC
CAGGCACAGGAACTCGAGCGCTTTGCCACGCAGACCGGCGTGCAGCTGCGCATCGCGGCCAGCAATACAATCGGCAGCTA
TATCCTCCCTGCCCTGCTGGCGGGCTTTCGCGCCTCGCAAGCGGGCCCTTGCCAGCTCGACCTGCGGATCGGCAACACGC
GCGATGTGCTGCGCTCATTGATGCAATTCGATGCCGACATCGGGCTCGTTGAAGGCGCGAGCCATGAACGCGAATTGCGG
AGCGTGCCTTGGTGCGATGACGAGATGGTCGTAGTCGTGGGGCCGTCTCATCCGCTCGCCGGACCGAATGCACCACTCGA
TGGCCTGCGCGATGCCGAATGGATCGTGCGCGAGCCCGGTTCAGGCACGCGCGAGATCATCGAGGAAAGGCTTGTGCCGC
TGCTCGGAGAGCTGCGCTTCGCACTGGAACTGGGCAATGCGGAGGCCATCAAGCGCGCCGTGATGAGCGGTTTCGGCGTG
AGCTGCCTGTCGCTGCATGTGGTGCGCGACGAACTGGAGCGCGGCACGCTGGTCGCAGTGCGGGAAGGCCTGCCGCGCAT
CATGCGTCCGCTGCAGCTTGTCGTGCACCAGGACAAGTTTCCGACGCGGGGATTGCTGGCCTTCACCGAATACCTGCGTG
TCGTCGCAGCGCAAGCCAGCGCACCGGCCTGA

Upstream 100 bases:

>100_bases
GACATGGCGGCAGTGGGTTTTGGTTAGTGCTTGCAGCGTAACTGCCCCACTTCAATCTGCAAAACGGGTAATATCGCTAT
GAATTACCTGAAATGTCGAT

Downstream 100 bases:

>100_bases
ACGTCGCAAAGTCGACGCACAAACGAAAACAGCGCCCATCGGGCGCTGTTTTCTTCAACTGGAGGCGGAGGTCGGAATCG
AACCGGCGTACACGGCTTTG

Product: regulatory protein, LysR:LysR, substrate-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MDQRPLRLTLRQLQVFVSVAQHGSTVAASEALAMSQSAVSASLAELERALDGPLFDRVARRLSINETGRQFFPRALSLLD
QAQELERFATQTGVQLRIAASNTIGSYILPALLAGFRASQAGPCQLDLRIGNTRDVLRSLMQFDADIGLVEGASHERELR
SVPWCDDEMVVVVGPSHPLAGPNAPLDGLRDAEWIVREPGSGTREIIEERLVPLLGELRFALELGNAEAIKRAVMSGFGV
SCLSLHVVRDELERGTLVAVREGLPRIMRPLQLVVHQDKFPTRGLLAFTEYLRVVAAQASAPA

Sequences:

>Translated_303_residues
MDQRPLRLTLRQLQVFVSVAQHGSTVAASEALAMSQSAVSASLAELERALDGPLFDRVARRLSINETGRQFFPRALSLLD
QAQELERFATQTGVQLRIAASNTIGSYILPALLAGFRASQAGPCQLDLRIGNTRDVLRSLMQFDADIGLVEGASHERELR
SVPWCDDEMVVVVGPSHPLAGPNAPLDGLRDAEWIVREPGSGTREIIEERLVPLLGELRFALELGNAEAIKRAVMSGFGV
SCLSLHVVRDELERGTLVAVREGLPRIMRPLQLVVHQDKFPTRGLLAFTEYLRVVAAQASAPA
>Mature_303_residues
MDQRPLRLTLRQLQVFVSVAQHGSTVAASEALAMSQSAVSASLAELERALDGPLFDRVARRLSINETGRQFFPRALSLLD
QAQELERFATQTGVQLRIAASNTIGSYILPALLAGFRASQAGPCQLDLRIGNTRDVLRSLMQFDADIGLVEGASHERELR
SVPWCDDEMVVVVGPSHPLAGPNAPLDGLRDAEWIVREPGSGTREIIEERLVPLLGELRFALELGNAEAIKRAVMSGFGV
SCLSLHVVRDELERGTLVAVREGLPRIMRPLQLVVHQDKFPTRGLLAFTEYLRVVAAQASAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=286, Percent_Identity=47.5524475524476, Blast_Score=254, Evalue=5e-69,
Organism=Escherichia coli, GI1786401, Length=295, Percent_Identity=27.7966101694915, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87082132, Length=255, Percent_Identity=27.4509803921569, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI157672245, Length=204, Percent_Identity=31.8627450980392, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788748, Length=280, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787601, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787128, Length=299, Percent_Identity=25.0836120401338, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788887, Length=190, Percent_Identity=29.4736842105263, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081904, Length=211, Percent_Identity=29.8578199052133, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787879, Length=271, Percent_Identity=25.830258302583, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33058; Mature: 33058

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRPLRLTLRQLQVFVSVAQHGSTVAASEALAMSQSAVSASLAELERALDGPLFDRVAR
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RLSINETGRQFFPRALSLLDQAQELERFATQTGVQLRIAASNTIGSYILPALLAGFRASQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC
AGPCQLDLRIGNTRDVLRSLMQFDADIGLVEGASHERELRSVPWCDDEMVVVVGPSHPLA
CCCEEEEEEECCHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCCCCEEEEECCCCCCC
GPNAPLDGLRDAEWIVREPGSGTREIIEERLVPLLGELRFALELGNAEAIKRAVMSGFGV
CCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
SCLSLHVVRDELERGTLVAVREGLPRIMRPLQLVVHQDKFPTRGLLAFTEYLRVVAAQAS
HHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
APA
CCC
>Mature Secondary Structure
MDQRPLRLTLRQLQVFVSVAQHGSTVAASEALAMSQSAVSASLAELERALDGPLFDRVAR
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RLSINETGRQFFPRALSLLDQAQELERFATQTGVQLRIAASNTIGSYILPALLAGFRASQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC
AGPCQLDLRIGNTRDVLRSLMQFDADIGLVEGASHERELRSVPWCDDEMVVVVGPSHPLA
CCCEEEEEEECCHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCCCCEEEEECCCCCCC
GPNAPLDGLRDAEWIVREPGSGTREIIEERLVPLLGELRFALELGNAEAIKRAVMSGFGV
CCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
SCLSLHVVRDELERGTLVAVREGLPRIMRPLQLVVHQDKFPTRGLLAFTEYLRVVAAQAS
HHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
APA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]