Click here to switch to the map view.

The map label for this gene is namA [H]

Identifier: 73541872

GI number: 73541872

Start: 2409177

End: 2411546

Strand: Reverse

Name: namA [H]

Synonym: Reut_A2184

Alternate gene names: 73541872

Gene position: 2411546-2409177 (Counterclockwise)

Preceding gene: 73541873

Following gene: 73541871

Centisome position: 63.35

GC content: 65.15

Gene sequence:

>2370_bases
ATGCGAGTGCTTTGTATTGGCGGCGGCCCGGCGGGACTGTACTTCGGGCTGTTGATGAAGCTGCAGGATCCGGCTAACGA
GGTCATCGTGGCGGAGCGCAACCGGCCCTACGATACGTTCGGCTGGGGCGTGGTGTTCTCCGACGCCACCATGGACAACC
TCAAGGTTGCCGATCCCGTCAGCGCCGCCGAAATCAATGAGGCGTTCAACCACTGGGACGACATCGACGTCCATATCGGC
GGCCGCACCATCCGCTCGGGGGGCCACGGCTTTATCGGCATCGGCCGCAAGCGTCTGCTCAACATCCTGCAGGCGCGCTG
CGAAGCGCTTGGCGTCAAGCTGGTGTTCGAGACGGATGTCTCGGACGACCAGGCGCTGGCGATGCAGTACCAGGCCGATC
TCGTCATTGCCTCGGACGGCCTGAACAGCCGCATCCGCACCCGCTACGCCGGTACCTTCCAGCCGGACATCGACACGCGC
CAGTGCCGCTTCGTCTGGCTCGGCACGCACAAGCTGTTCGATGCCTTCACGTTTGCGTTCGAGAAGACCGAGCACGGCTG
GTTCCAGGCGCATGCGTACCGCTTCGATGACAACACTTCGACCTTTATCGTGGAGACGCCGCAAGAAGTGTGGAGCGCCG
CAGGCATCGAGCAGATGAGCCAGGAAGAGGGCATCGCGTACTGCGAGAAGCTCTTCGCGAAATACCTCGACGGCAACAAG
CTCATCAGCAATGCGACGCATCTGCGCGGCTCGGCAAACTGGATCCGCTTCCCGCGCGTGATCTGCAAGCACTGGGTGCA
CTGGAACACGCTGCCCGACGGCCGGCGCGTGCCGGTGGTGCTGATGGGTGACGCCGCGCACACGGCGCACTTCTCCATCG
GCTCGGGTACCAAGCTGGCGCTGGAAGACGCAATCGACCTGGCTACCGAGATCGCAGCTTCGGGCCCGTCTGCGCATGAC
GCGCTTCCCGCGGCGCTGGAGCGCTACGCAGCTACCCGCAGCGTGGAAGTGCTGAAGATCCAGAACGCGGCGCGCAATTC
CACCGAGTGGTTCGAGAATGTCGAGCGCTATGCAAGCCTTGCGCCCGAGCAGTTTGCATATTCGCTGCTGACCCGTTCGC
AGCGCATCTCGCATGAGAACCTGCGCGTGCGTGATGCTGGCTACGTGCGAAAGTTCGAGCACTGGCTGGCCGGAGAGGCC
GGTGTGCCCGCCGAATCGCTGCGGCTGCGCGAAGACAAGCCCGTGCCGCCGATGTTCACGCCGTACCGCGTGCGCGGCGT
CACGTTGAAGAACCGCGTGGTCGTGTCGCCGATGGCGATGTACTCGAGCGTGGATGGTGTGCCGGGCGATTTCCATCTGG
TGCATCTCGGTTCGCGCGCGCTCGGCGGTGCCGGCATGGTCGTGGCCGAGATGACCTGCGTGTCGCCCGATGCGCGCATC
ACGCCGGCGTGCCCGGGTTTGTGGAACGACGCGCAGCGCGATGCGTGGAAACGCATTGTCGATTTCGTGCATGCGAACAG
CGATGCGCGCATCGCCATGCAGATCGGCCATGCCGGGCGCAAGGGCTCGACGCAGCTCGGCTGGGAGAAGATGGATCATC
CGCTTCCGCACGGAAACTGGCCGCTGTTTTCGGCCTCGCCGATTCCCTACCTGCCCGGCGAGTCGCAGGTGCCGCGCGAA
ATGACACGCGAAGACATGGACCGCGTGCGCGATGATTTCGTCGGTGCTGCCCGTCGCGCCGCGGAGGCGGGGTTCGACTG
GCTTGAGCTGCACTGCGCGCACGGCTACCTGCTGTCGAGCTTCATCTCGCCGCTGAGCAACCAGCGCACTGACGAATACG
GCGGCACGCTCGCCAATCGCTTGCGTTACCCGCTTGAAGTTTTCGCGGCAGTGCGCGAAGTATGGCCGGCGGACAAGCCG
ATGTCGGTGCGCATCTCGGCGCACGACTGGGTCGAAGGCGGCATCACGCCCGATGATGCGGTGGAGATCGCGCGCGCCTT
CAAGGCAGTCGGTGCGGACATGATCGACTGTTCGTCGGGTCAGGTGAGCCCGGACCAGGCGCCGGTCTACGGCCGCATGT
ACCAGACGCCGTTCGCGGACCGCATTCGCAACGAGGCGGACATTCCTACGATTGCGGTTGGTGCGATCTTCGAAGCCGAC
CATGTCGACAGCATCATCGCCGCGGGTCGTGCCGACCTGTGCGCCGTGGCACGGCCGCATCTGGCCGACCCGGCATGGAC
GCTGCACGAGGCCGCAAAACTTGGCTACCGCGACGTAAGCTGGCCGCGGCAGTATGAGGCGGGCAAGCGCCAGCTCGAAA
CCAACCTGGAACGCGCCGCGGCCCTGGCCCGCGCCGTGGTGGAGCACTGA

Upstream 100 bases:

>100_bases
AACGCCAGCGCATGCAGACTAATATTTGAAGCATAAAATATTTAAACCTGATTTAGATGCGCTCCCTGCCGATGCGAGGG
GGCTCGGCAGGAGACGACAG

Downstream 100 bases:

>100_bases
TGATGGCAGCGGAGTTTTCCCTGCAAGGCCGGCACGCACTGGTCACCGGCGGCGGGCGCGGCATCGGCGCGGCAATCGCG
CGCCGGTTGCTGGCTGACGG

Product: salicylyl-CoA 5-hydroxylase

Products: NA

Alternate protein names: Xenobiotic reductase [H]

Number of amino acids: Translated: 789; Mature: 789

Protein sequence:

>789_residues
MRVLCIGGGPAGLYFGLLMKLQDPANEVIVAERNRPYDTFGWGVVFSDATMDNLKVADPVSAAEINEAFNHWDDIDVHIG
GRTIRSGGHGFIGIGRKRLLNILQARCEALGVKLVFETDVSDDQALAMQYQADLVIASDGLNSRIRTRYAGTFQPDIDTR
QCRFVWLGTHKLFDAFTFAFEKTEHGWFQAHAYRFDDNTSTFIVETPQEVWSAAGIEQMSQEEGIAYCEKLFAKYLDGNK
LISNATHLRGSANWIRFPRVICKHWVHWNTLPDGRRVPVVLMGDAAHTAHFSIGSGTKLALEDAIDLATEIAASGPSAHD
ALPAALERYAATRSVEVLKIQNAARNSTEWFENVERYASLAPEQFAYSLLTRSQRISHENLRVRDAGYVRKFEHWLAGEA
GVPAESLRLREDKPVPPMFTPYRVRGVTLKNRVVVSPMAMYSSVDGVPGDFHLVHLGSRALGGAGMVVAEMTCVSPDARI
TPACPGLWNDAQRDAWKRIVDFVHANSDARIAMQIGHAGRKGSTQLGWEKMDHPLPHGNWPLFSASPIPYLPGESQVPRE
MTREDMDRVRDDFVGAARRAAEAGFDWLELHCAHGYLLSSFISPLSNQRTDEYGGTLANRLRYPLEVFAAVREVWPADKP
MSVRISAHDWVEGGITPDDAVEIARAFKAVGADMIDCSSGQVSPDQAPVYGRMYQTPFADRIRNEADIPTIAVGAIFEAD
HVDSIIAAGRADLCAVARPHLADPAWTLHEAAKLGYRDVSWPRQYEAGKRQLETNLERAAALARAVVEH

Sequences:

>Translated_789_residues
MRVLCIGGGPAGLYFGLLMKLQDPANEVIVAERNRPYDTFGWGVVFSDATMDNLKVADPVSAAEINEAFNHWDDIDVHIG
GRTIRSGGHGFIGIGRKRLLNILQARCEALGVKLVFETDVSDDQALAMQYQADLVIASDGLNSRIRTRYAGTFQPDIDTR
QCRFVWLGTHKLFDAFTFAFEKTEHGWFQAHAYRFDDNTSTFIVETPQEVWSAAGIEQMSQEEGIAYCEKLFAKYLDGNK
LISNATHLRGSANWIRFPRVICKHWVHWNTLPDGRRVPVVLMGDAAHTAHFSIGSGTKLALEDAIDLATEIAASGPSAHD
ALPAALERYAATRSVEVLKIQNAARNSTEWFENVERYASLAPEQFAYSLLTRSQRISHENLRVRDAGYVRKFEHWLAGEA
GVPAESLRLREDKPVPPMFTPYRVRGVTLKNRVVVSPMAMYSSVDGVPGDFHLVHLGSRALGGAGMVVAEMTCVSPDARI
TPACPGLWNDAQRDAWKRIVDFVHANSDARIAMQIGHAGRKGSTQLGWEKMDHPLPHGNWPLFSASPIPYLPGESQVPRE
MTREDMDRVRDDFVGAARRAAEAGFDWLELHCAHGYLLSSFISPLSNQRTDEYGGTLANRLRYPLEVFAAVREVWPADKP
MSVRISAHDWVEGGITPDDAVEIARAFKAVGADMIDCSSGQVSPDQAPVYGRMYQTPFADRIRNEADIPTIAVGAIFEAD
HVDSIIAAGRADLCAVARPHLADPAWTLHEAAKLGYRDVSWPRQYEAGKRQLETNLERAAALARAVVEH
>Mature_789_residues
MRVLCIGGGPAGLYFGLLMKLQDPANEVIVAERNRPYDTFGWGVVFSDATMDNLKVADPVSAAEINEAFNHWDDIDVHIG
GRTIRSGGHGFIGIGRKRLLNILQARCEALGVKLVFETDVSDDQALAMQYQADLVIASDGLNSRIRTRYAGTFQPDIDTR
QCRFVWLGTHKLFDAFTFAFEKTEHGWFQAHAYRFDDNTSTFIVETPQEVWSAAGIEQMSQEEGIAYCEKLFAKYLDGNK
LISNATHLRGSANWIRFPRVICKHWVHWNTLPDGRRVPVVLMGDAAHTAHFSIGSGTKLALEDAIDLATEIAASGPSAHD
ALPAALERYAATRSVEVLKIQNAARNSTEWFENVERYASLAPEQFAYSLLTRSQRISHENLRVRDAGYVRKFEHWLAGEA
GVPAESLRLREDKPVPPMFTPYRVRGVTLKNRVVVSPMAMYSSVDGVPGDFHLVHLGSRALGGAGMVVAEMTCVSPDARI
TPACPGLWNDAQRDAWKRIVDFVHANSDARIAMQIGHAGRKGSTQLGWEKMDHPLPHGNWPLFSASPIPYLPGESQVPRE
MTREDMDRVRDDFVGAARRAAEAGFDWLELHCAHGYLLSSFISPLSNQRTDEYGGTLANRLRYPLEVFAAVREVWPADKP
MSVRISAHDWVEGGITPDDAVEIARAFKAVGADMIDCSSGQVSPDQAPVYGRMYQTPFADRIRNEADIPTIAVGAIFEAD
HVDSIIAAGRADLCAVARPHLADPAWTLHEAAKLGYRDVSWPRQYEAGKRQLETNLERAAALARAVVEH

Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787939, Length=337, Percent_Identity=31.7507418397626, Blast_Score=143, Evalue=5e-35,
Organism=Escherichia coli, GI1789463, Length=334, Percent_Identity=30.8383233532934, Blast_Score=127, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17565138, Length=228, Percent_Identity=31.5789473684211, Blast_Score=113, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI72001454, Length=243, Percent_Identity=29.6296296296296, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17540738, Length=270, Percent_Identity=27.7777777777778, Blast_Score=102, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17564188, Length=254, Percent_Identity=29.1338582677165, Blast_Score=101, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17559802, Length=121, Percent_Identity=41.3223140495868, Blast_Score=99, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17559804, Length=247, Percent_Identity=30.3643724696356, Blast_Score=96, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17566914, Length=281, Percent_Identity=27.4021352313167, Blast_Score=87, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6325086, Length=268, Percent_Identity=30.2238805970149, Blast_Score=107, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6321973, Length=243, Percent_Identity=29.2181069958848, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN [H]

EC number: =1.6.99.1 [H]

Molecular weight: Translated: 87439; Mature: 87439

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00383 TYR_PHOSPHATASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLCIGGGPAGLYFGLLMKLQDPANEVIVAERNRPYDTFGWGVVFSDATMDNLKVADPV
CEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC
SAAEINEAFNHWDDIDVHIGGRTIRSGGHGFIGIGRKRLLNILQARCEALGVKLVFETDV
HHHHHHHHHCCCCCEEEEECCEEEECCCCCEEECCHHHHHHHHHHHHHHCCEEEEEECCC
SDDQALAMQYQADLVIASDGLNSRIRTRYAGTFQPDIDTRQCRFVWLGTHKLFDAFTFAF
CCCHHEEEEEECCEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHH
EKTEHGWFQAHAYRFDDNTSTFIVETPQEVWSAAGIEQMSQEEGIAYCEKLFAKYLDGNK
HCCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCH
LISNATHLRGSANWIRFPRVICKHWVHWNTLPDGRRVPVVLMGDAAHTAHFSIGSGTKLA
HHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEH
LEDAIDLATEIAASGPSAHDALPAALERYAATRSVEVLKIQNAARNSTEWFENVERYASL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHC
APEQFAYSLLTRSQRISHENLRVRDAGYVRKFEHWLAGEAGVPAESLRLREDKPVPPMFT
CHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC
PYRVRGVTLKNRVVVSPMAMYSSVDGVPGDFHLVHLGSRALGGAGMVVAEMTCVSPDARI
CEEEEEEEECCEEEECHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCC
TPACPGLWNDAQRDAWKRIVDFVHANSDARIAMQIGHAGRKGSTQLGWEKMDHPLPHGNW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCC
PLFSASPIPYLPGESQVPREMTREDMDRVRDDFVGAARRAAEAGFDWLELHCAHGYLLSS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
FISPLSNQRTDEYGGTLANRLRYPLEVFAAVREVWPADKPMSVRISAHDWVEGGITPDDA
HHHHHHCCCCHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHH
VEIARAFKAVGADMIDCSSGQVSPDQAPVYGRMYQTPFADRIRNEADIPTIAVGAIFEAD
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCEEEEEHEECHH
HVDSIIAAGRADLCAVARPHLADPAWTLHEAAKLGYRDVSWPRQYEAGKRQLETNLERAA
HHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALARAVVEH
HHHHHHHCC
>Mature Secondary Structure
MRVLCIGGGPAGLYFGLLMKLQDPANEVIVAERNRPYDTFGWGVVFSDATMDNLKVADPV
CEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC
SAAEINEAFNHWDDIDVHIGGRTIRSGGHGFIGIGRKRLLNILQARCEALGVKLVFETDV
HHHHHHHHHCCCCCEEEEECCEEEECCCCCEEECCHHHHHHHHHHHHHHCCEEEEEECCC
SDDQALAMQYQADLVIASDGLNSRIRTRYAGTFQPDIDTRQCRFVWLGTHKLFDAFTFAF
CCCHHEEEEEECCEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHH
EKTEHGWFQAHAYRFDDNTSTFIVETPQEVWSAAGIEQMSQEEGIAYCEKLFAKYLDGNK
HCCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCH
LISNATHLRGSANWIRFPRVICKHWVHWNTLPDGRRVPVVLMGDAAHTAHFSIGSGTKLA
HHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEH
LEDAIDLATEIAASGPSAHDALPAALERYAATRSVEVLKIQNAARNSTEWFENVERYASL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHC
APEQFAYSLLTRSQRISHENLRVRDAGYVRKFEHWLAGEAGVPAESLRLREDKPVPPMFT
CHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCC
PYRVRGVTLKNRVVVSPMAMYSSVDGVPGDFHLVHLGSRALGGAGMVVAEMTCVSPDARI
CEEEEEEEECCEEEECHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCC
TPACPGLWNDAQRDAWKRIVDFVHANSDARIAMQIGHAGRKGSTQLGWEKMDHPLPHGNW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCC
PLFSASPIPYLPGESQVPREMTREDMDRVRDDFVGAARRAAEAGFDWLELHCAHGYLLSS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
FISPLSNQRTDEYGGTLANRLRYPLEVFAAVREVWPADKPMSVRISAHDWVEGGITPDDA
HHHHHHCCCCHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHH
VEIARAFKAVGADMIDCSSGQVSPDQAPVYGRMYQTPFADRIRNEADIPTIAVGAIFEAD
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCEEEEEHEECHH
HVDSIIAAGRADLCAVARPHLADPAWTLHEAAKLGYRDVSWPRQYEAGKRQLETNLERAA
HHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
ALARAVVEH
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA