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The map label for this gene is ytbD [H]

Identifier: 73541538

GI number: 73541538

Start: 2024363

End: 2025568

Strand: Direct

Name: ytbD [H]

Synonym: Reut_A1849

Alternate gene names: 73541538

Gene position: 2024363-2025568 (Clockwise)

Preceding gene: 73541532

Following gene: 73541540

Centisome position: 53.18

GC content: 66.67

Gene sequence:

>1206_bases
ATGCCCATTGCCCTGTTAGCGCTAACCATCAGCGCATTCGCCATCGGCACGACGGAATTCGTCATCGTCGGGCTGATTCC
CACCATTGCCGCGGACCTGCACATCAGCCTGCCATCGGCGGGCCTGCTGGTCAGCCTGTATGCGCTCGGCGTGGCCGTTG
GCGCACCCGTACTGACGGCGCTGACCGGCCGCTTGCCACGCAAGACGCTGCTGCTGTCACTGATGGCGCTGTTCACGCTC
GGCAACCTGCTTGCATGGAAAGCGCCCAGCTATGAGTCGCTGGTCGTCGCACGGATCCTGACCGGTCTGGCGCATGGCGT
ATTCTTCTCAATCGGCTCGACCATCGCCACCGGCCTCGTGCCGAAGGAGAAGGCCGCCAGCGCGATTGCCATCATGTTCA
CCGGCCTGACCGTCGCACTGGTAACGGGTGTCCCGCTGGGCACGTTCATCGGCCAGCATTTCGGCTGGCGCGAGACATTC
CTGGCCGTCTCCGGACTTGGCGCAATCGCCTTCGTGGGCAGCCTGCTGTTCGTGCCGTCGTCGATCCGGCATACGCAGCC
GGCCTCATTGCTCCAGCAGGCGCGCGTGCTGGCCGAGCCGAGGTTGCTGCTCGTCTACGCGAAGACCGCGATCGGCTATG
GCGGCTCGTTCATCCCGTTCACGTTCCTGGCGCCCATCCTGCAGGACGTCTCGGGGTTCAGCGCCAACGCAGTCGGGCTG
GTGATGCTCGTGTACGGCGTGTCCGTGGCCGTGGGCAATATCTGGGGCGGCCGCCTTGCTGACCGCCATGGTCCGATCGC
TGCGCTGCGCCTCGTGTTCCTGCTGCTGGCGGCGGTGCTGTTCGTGCTGACCTTCACCGCACCGCACCCGTGGCTCGTCG
TGGCGACGGTACTGGCCTGGGGCGCCGTGGCCTTCGGCAATGTGCCGGGCCTGCAGGTCTACGTCGTCAAGCAGGCGGAG
CGACACACACCGCATGCTGTCGACGTCGCATCCGGCCTGAACATCGCGGCCTTCAACCTTGGCATTGCCGGGGCGGCGTG
GGCCGGTGGTCTCATCGTGACCCACCTGGGGCTGATGCATACGCCATGGATCGGCGCGCTCGTCGTGCTGGTTGCACTGG
GCCTGACTGAGCTGAGCGGCCGGCTGGACCGCGCAGCGGGCTTCGATGCACGCGGCAGCCTGCCTGCAGGCGCCGCGATG
CACTGA

Upstream 100 bases:

>100_bases
CACATTCTTGAATTCAATTCAAATATCTTCTGTCGATCACCACCTTAATCCGCAAAGATAATGCGGGCACACTGCCGCCA
TCCACTTTTCGGAGGCAGAC

Downstream 100 bases:

>100_bases
GCCCCGGCGCTGCCGGGACCGGCACGCTCAACGCGTGCCGAGATAGTCCATCTTGCCGATCTGCACGCCCTTGTGGCGCA
GGATGTCGTAGGCAGTCGTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPIALLALTISAFAIGTTEFVIVGLIPTIAADLHISLPSAGLLVSLYALGVAVGAPVLTALTGRLPRKTLLLSLMALFTL
GNLLAWKAPSYESLVVARILTGLAHGVFFSIGSTIATGLVPKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETF
LAVSGLGAIAFVGSLLFVPSSIRHTQPASLLQQARVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILQDVSGFSANAVGL
VMLVYGVSVAVGNIWGGRLADRHGPIAALRLVFLLLAAVLFVLTFTAPHPWLVVATVLAWGAVAFGNVPGLQVYVVKQAE
RHTPHAVDVASGLNIAAFNLGIAGAAWAGGLIVTHLGLMHTPWIGALVVLVALGLTELSGRLDRAAGFDARGSLPAGAAM
H

Sequences:

>Translated_401_residues
MPIALLALTISAFAIGTTEFVIVGLIPTIAADLHISLPSAGLLVSLYALGVAVGAPVLTALTGRLPRKTLLLSLMALFTL
GNLLAWKAPSYESLVVARILTGLAHGVFFSIGSTIATGLVPKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETF
LAVSGLGAIAFVGSLLFVPSSIRHTQPASLLQQARVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILQDVSGFSANAVGL
VMLVYGVSVAVGNIWGGRLADRHGPIAALRLVFLLLAAVLFVLTFTAPHPWLVVATVLAWGAVAFGNVPGLQVYVVKQAE
RHTPHAVDVASGLNIAAFNLGIAGAAWAGGLIVTHLGLMHTPWIGALVVLVALGLTELSGRLDRAAGFDARGSLPAGAAM
H
>Mature_400_residues
PIALLALTISAFAIGTTEFVIVGLIPTIAADLHISLPSAGLLVSLYALGVAVGAPVLTALTGRLPRKTLLLSLMALFTLG
NLLAWKAPSYESLVVARILTGLAHGVFFSIGSTIATGLVPKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETFL
AVSGLGAIAFVGSLLFVPSSIRHTQPASLLQQARVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILQDVSGFSANAVGLV
MLVYGVSVAVGNIWGGRLADRHGPIAALRLVFLLLAAVLFVLTFTAPHPWLVVATVLAWGAVAFGNVPGLQVYVVKQAER
HTPHAVDVASGLNIAAFNLGIAGAAWAGGLIVTHLGLMHTPWIGALVVLVALGLTELSGRLDRAAGFDARGSLPAGAAMH

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=378, Percent_Identity=41.5343915343915, Blast_Score=238, Evalue=7e-64,
Organism=Escherichia coli, GI1786595, Length=393, Percent_Identity=32.824427480916, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787808, Length=369, Percent_Identity=29.810298102981, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI145693198, Length=364, Percent_Identity=26.9230769230769, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41387; Mature: 41255

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIALLALTISAFAIGTTEFVIVGLIPTIAADLHISLPSAGLLVSLYALGVAVGAPVLTA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHH
LTGRLPRKTLLLSLMALFTLGNLLAWKAPSYESLVVARILTGLAHGVFFSIGSTIATGLV
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETFLAVSGLGAIAFVGSLLFVPS
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCC
SIRHTQPASLLQQARVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILQDVSGFSANAVGL
CCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
VMLVYGVSVAVGNIWGGRLADRHGPIAALRLVFLLLAAVLFVLTFTAPHPWLVVATVLAW
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GAVAFGNVPGLQVYVVKQAERHTPHAVDVASGLNIAAFNLGIAGAAWAGGLIVTHLGLMH
HHHHCCCCCCEEEEEEECHHCCCCCCEEHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
TPWIGALVVLVALGLTELSGRLDRAAGFDARGSLPAGAAMH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIALLALTISAFAIGTTEFVIVGLIPTIAADLHISLPSAGLLVSLYALGVAVGAPVLTA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHH
LTGRLPRKTLLLSLMALFTLGNLLAWKAPSYESLVVARILTGLAHGVFFSIGSTIATGLV
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETFLAVSGLGAIAFVGSLLFVPS
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCC
SIRHTQPASLLQQARVLAEPRLLLVYAKTAIGYGGSFIPFTFLAPILQDVSGFSANAVGL
CCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
VMLVYGVSVAVGNIWGGRLADRHGPIAALRLVFLLLAAVLFVLTFTAPHPWLVVATVLAW
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GAVAFGNVPGLQVYVVKQAERHTPHAVDVASGLNIAAFNLGIAGAAWAGGLIVTHLGLMH
HHHHCCCCCCEEEEEEECHHCCCCCCEEHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
TPWIGALVVLVALGLTELSGRLDRAAGFDARGSLPAGAAMH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]