| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is pqqB [H]
Identifier: 73541468
GI number: 73541468
Start: 1942768
End: 1943685
Strand: Direct
Name: pqqB [H]
Synonym: Reut_A1779
Alternate gene names: 73541468
Gene position: 1942768-1943685 (Clockwise)
Preceding gene: 73541467
Following gene: 73541469
Centisome position: 51.04
GC content: 66.67
Gene sequence:
>918_bases ATGACAACTATCCGCGTACTCGGATCGGCCGCCGGCGGCGGCTTTCCGCAGTGGAACTGCAACTGCCACAACTGCGATGG CGTGCGCCGCGGCACCGTACACGCCACGCCGCGCACGCAATCATCGATTGCGCTGTCCGGCGACGGACCGGATTCGATAC TCGTCAACGCGTCTCCCGACATCCTGCAGCAACTGCGCCAGACGCCCGCGCTGCAGCCGGCCCGCTCGCCACGCGATACG GCAATCGCCGCGGTGCTGTTGATGGATGCGCAGATTGACCACGTCACCGGCCTGCTGATGCTGCGCGAGCATCGCCAGGC CTTGCCGCTGTTTGCCACGGCCGCAGTGCTCGACGACCTGAGCAACGCGTTTCCGCTCACCCGCTTGCTGTCGCACTACT GCGGCTTGCAGACGCATACCTTGCCCTGCGACGGCACGCCGTTCTCCGTGCCGCCGCTGGACGGCGTCATGCTCACCGCG GTGCCATTGCAAAGCAAGGCGCCGCCCTATTCGCCGGGGCGCCACGCGCCGCGCCTCGGCGACAACATCGGCCTGCGCAT CGAAGACCGCCACAGCGGGCGCCGCGCCTTCTATGCGCCAGGCCTGGGCAGCGTCGACGACCATGTCTTCGCAGAACTGC GCAGCGCCGACGTCGTGCTGGTCGACGGCACGTTCTGGCGCGAGGACGAGATGCGGTCGCTCGGCTTCTCCACGAAGGCT GCTGCCGATATGGGCCATCTCCCGCTGTCTGGCCCGGGTGGCATGATCGAAATCCTCGACCGGCTGTCCGCGAGCCGCAA GATCCTTATCCACATCAACAATACCAATCCCGTGCTGGTGGAAGACTCGCCGGAGCACGCGGTGCTGGCGCGGCACGGCA TCGAGCTGGCATACGACGGCATGGAGATCACGCTATGA
Upstream 100 bases:
>100_bases AAGCCTGCTGCACGCGGCGGCGTGCCGGCGTGCGGTTCCGGCATGCCGGAACCGCACGCCCGCCCCGCGCCTGGATGACC CACTTCGACTCGCTCGCGCC
Downstream 100 bases:
>100_bases CATATTCCACCGCATCGGGTCCCGCGGAGTTCGAAGCGCGGCTGCGCGCCAAAGAAACCGGCTACCACATTCATCACCCG TTCAACCAGCGCATGGCGGC
Product: pyrroloquinoline quinone biosynthesis protein PqqB
Products: NA
Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTTIRVLGSAAGGGFPQWNCNCHNCDGVRRGTVHATPRTQSSIALSGDGPDSILVNASPDILQQLRQTPALQPARSPRDT AIAAVLLMDAQIDHVTGLLMLREHRQALPLFATAAVLDDLSNAFPLTRLLSHYCGLQTHTLPCDGTPFSVPPLDGVMLTA VPLQSKAPPYSPGRHAPRLGDNIGLRIEDRHSGRRAFYAPGLGSVDDHVFAELRSADVVLVDGTFWREDEMRSLGFSTKA AADMGHLPLSGPGGMIEILDRLSASRKILIHINNTNPVLVEDSPEHAVLARHGIELAYDGMEITL
Sequences:
>Translated_305_residues MTTIRVLGSAAGGGFPQWNCNCHNCDGVRRGTVHATPRTQSSIALSGDGPDSILVNASPDILQQLRQTPALQPARSPRDT AIAAVLLMDAQIDHVTGLLMLREHRQALPLFATAAVLDDLSNAFPLTRLLSHYCGLQTHTLPCDGTPFSVPPLDGVMLTA VPLQSKAPPYSPGRHAPRLGDNIGLRIEDRHSGRRAFYAPGLGSVDDHVFAELRSADVVLVDGTFWREDEMRSLGFSTKA AADMGHLPLSGPGGMIEILDRLSASRKILIHINNTNPVLVEDSPEHAVLARHGIELAYDGMEITL >Mature_304_residues TTIRVLGSAAGGGFPQWNCNCHNCDGVRRGTVHATPRTQSSIALSGDGPDSILVNASPDILQQLRQTPALQPARSPRDTA IAAVLLMDAQIDHVTGLLMLREHRQALPLFATAAVLDDLSNAFPLTRLLSHYCGLQTHTLPCDGTPFSVPPLDGVMLTAV PLQSKAPPYSPGRHAPRLGDNIGLRIEDRHSGRRAFYAPGLGSVDDHVFAELRSADVVLVDGTFWREDEMRSLGFSTKAA ADMGHLPLSGPGGMIEILDRLSASRKILIHINNTNPVLVEDSPEHAVLARHGIELAYDGMEITL
Specific function: May be involved in the transport of PQQ or its precursor to the periplasm [H]
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011842 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32801; Mature: 32670
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIRVLGSAAGGGFPQWNCNCHNCDGVRRGTVHATPRTQSSIALSGDGPDSILVNASPD CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEEEECCHH ILQQLRQTPALQPARSPRDTAIAAVLLMDAQIDHVTGLLMLREHRQALPLFATAAVLDDL HHHHHHHCCCCCCCCCCHHHHHEEHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SNAFPLTRLLSHYCGLQTHTLPCDGTPFSVPPLDGVMLTAVPLQSKAPPYSPGRHAPRLG HCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DNIGLRIEDRHSGRRAFYAPGLGSVDDHVFAELRSADVVLVDGTFWREDEMRSLGFSTKA CCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCHH AADMGHLPLSGPGGMIEILDRLSASRKILIHINNTNPVLVEDSPEHAVLARHGIELAYDG HHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEHHHCCCEEEECC MEITL EEEEC >Mature Secondary Structure TTIRVLGSAAGGGFPQWNCNCHNCDGVRRGTVHATPRTQSSIALSGDGPDSILVNASPD CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEEEECCHH ILQQLRQTPALQPARSPRDTAIAAVLLMDAQIDHVTGLLMLREHRQALPLFATAAVLDDL HHHHHHHCCCCCCCCCCHHHHHEEHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SNAFPLTRLLSHYCGLQTHTLPCDGTPFSVPPLDGVMLTAVPLQSKAPPYSPGRHAPRLG HCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DNIGLRIEDRHSGRRAFYAPGLGSVDDHVFAELRSADVVLVDGTFWREDEMRSLGFSTKA CCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCHH AADMGHLPLSGPGGMIEILDRLSASRKILIHINNTNPVLVEDSPEHAVLARHGIELAYDG HHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEHHHCCCEEEECC MEITL EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA