| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541337
Identifier: 73541337
GI number: 73541337
Start: 1774228
End: 1775403
Strand: Direct
Name: 73541337
Synonym: Reut_A1647
Alternate gene names: NA
Gene position: 1774228-1775403 (Clockwise)
Preceding gene: 73541336
Following gene: 73541347
Centisome position: 46.61
GC content: 61.48
Gene sequence:
>1176_bases GTGCGGCGTCAATTCAAAATCTTCGCTTTCGTGATTCTCACTGCGCTCGGTACCGCCCGTGCCGACGACGGGAGAGGTTT GGCACGGAGTGGTAATCCCAATGAGGTTTCGATTTCAGGGGTTTCATCCGGCGCTGCCATGGCCATTCAGTACGCTGTCG CCCATTCCAGTTCCATCGTCGGAGTGGGCGCCGTTGCCGGCCCGGGGTGGGGCTGTGCGGACGGCCGACTATCCGTGGCA ATCAATGACTGCATGTGTGGACGGCAGCCTACTGCTCCCCATGTTGCGGGCGCCCGCGCGCAAGCGGCGAGCGGGTCGAT CGATCAGCTGGTCGCGGGCAAGCCGGTGGCACTTCAGCGCTCCTATGTCTTCCAGAGCCCGGAAGACCATACCGTGGTAA AGCAGTCGGGTCAGGCGAGCATTGACTTCCTGGCTGCCTTTATCGGAAAAGCGCCTGTCGTGGACAGAGGGAATGCCGCG GACGGAAGCAACCGGGCCGGCCACGGCATTATCTCCCCCGACGGGACGGATGCGTGCCAGTCCAATGGCAAGGAAAAGAC CTACGTTCGCCGCTGCGGCGCGGAAGACAATGCCGGGAAGCTTTTCCACGCCCTTTATGAACCGGCCACGGTCTACGATC CGACCAGGCGTGTCAGGGACATCCCGGCAACGGAGGTCTGGGCATTCAAGCAACAGCCGCTGATCGACCCGATCAAAAAG AGCGACGGCAAGATCGCCCCTGACGGTATCTTCTGGCTACCCTTCAGCACCGCGCGGCGCAAGAACTTCGATATGGCGGA TACCGGATATCTCTACGTTCCGCCGTCCTGCCGAAGCAGCGGCAGCCGTTGCCGGATACACATTGCACTGCATGGCTGCA AACAGACGGCGAAAGAGTTTGCCGTGACCGCGGGCTACAACAATTGGGCGGACTACTACAAGGTCATCGTCATCTACCCG GCGCTCGATCACCAGACGTCCATGGATGGAGAGGTTTGCGCCATGCCCGCGGCGTTGCGGATTGCCGATTCCAGCTGGGT GAAGCCGAACCCGAACGCCTGCTGGGACTGGTGGGGCTATCTGGACGATGAGACGCCGCAGGCCAGGCGTTACCTGACCA GCAAGGCGCCGCAGATGCGGGTGATTGAAAGCATCATTGGCGAAGCCACACGGTAG
Upstream 100 bases:
>100_bases CGGCGTGCGTGCTGTCGATGCTCTGGTTCCGGCGGTGAACGGCAGCGTAGGCAAGCGGCTGGCATGCGCCAGCCCGGGTG TCCTGGAGGAGAGACACAAC
Downstream 100 bases:
>100_bases GGAAACCTTTGCGATGGCGGGTTTGGCAAAATGCCACCATGAATGCGCATATTTCCGGAGATCCACACCGAGCTGGGCGC CCATCTCGTGGAAGAGCAAC
Product: putative depolymerase
Products: NA
Alternate protein names: Depolymerase; Polyhydroxybutyrate Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly Depolymerase Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRRQFKIFAFVILTALGTARADDGRGLARSGNPNEVSISGVSSGAAMAIQYAVAHSSSIVGVGAVAGPGWGCADGRLSVA INDCMCGRQPTAPHVAGARAQAASGSIDQLVAGKPVALQRSYVFQSPEDHTVVKQSGQASIDFLAAFIGKAPVVDRGNAA DGSNRAGHGIISPDGTDACQSNGKEKTYVRRCGAEDNAGKLFHALYEPATVYDPTRRVRDIPATEVWAFKQQPLIDPIKK SDGKIAPDGIFWLPFSTARRKNFDMADTGYLYVPPSCRSSGSRCRIHIALHGCKQTAKEFAVTAGYNNWADYYKVIVIYP ALDHQTSMDGEVCAMPAALRIADSSWVKPNPNACWDWWGYLDDETPQARRYLTSKAPQMRVIESIIGEATR
Sequences:
>Translated_391_residues MRRQFKIFAFVILTALGTARADDGRGLARSGNPNEVSISGVSSGAAMAIQYAVAHSSSIVGVGAVAGPGWGCADGRLSVA INDCMCGRQPTAPHVAGARAQAASGSIDQLVAGKPVALQRSYVFQSPEDHTVVKQSGQASIDFLAAFIGKAPVVDRGNAA DGSNRAGHGIISPDGTDACQSNGKEKTYVRRCGAEDNAGKLFHALYEPATVYDPTRRVRDIPATEVWAFKQQPLIDPIKK SDGKIAPDGIFWLPFSTARRKNFDMADTGYLYVPPSCRSSGSRCRIHIALHGCKQTAKEFAVTAGYNNWADYYKVIVIYP ALDHQTSMDGEVCAMPAALRIADSSWVKPNPNACWDWWGYLDDETPQARRYLTSKAPQMRVIESIIGEATR >Mature_391_residues MRRQFKIFAFVILTALGTARADDGRGLARSGNPNEVSISGVSSGAAMAIQYAVAHSSSIVGVGAVAGPGWGCADGRLSVA INDCMCGRQPTAPHVAGARAQAASGSIDQLVAGKPVALQRSYVFQSPEDHTVVKQSGQASIDFLAAFIGKAPVVDRGNAA DGSNRAGHGIISPDGTDACQSNGKEKTYVRRCGAEDNAGKLFHALYEPATVYDPTRRVRDIPATEVWAFKQQPLIDPIKK SDGKIAPDGIFWLPFSTARRKNFDMADTGYLYVPPSCRSSGSRCRIHIALHGCKQTAKEFAVTAGYNNWADYYKVIVIYP ALDHQTSMDGEVCAMPAALRIADSSWVKPNPNACWDWWGYLDDETPQARRYLTSKAPQMRVIESIIGEATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42072; Mature: 42072
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQFKIFAFVILTALGTARADDGRGLARSGNPNEVSISGVSSGAAMAIQYAVAHSSSIV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCEE GVGAVAGPGWGCADGRLSVAINDCMCGRQPTAPHVAGARAQAASGSIDQLVAGKPVALQR EEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCEEEEH SYVFQSPEDHTVVKQSGQASIDFLAAFIGKAPVVDRGNAADGSNRAGHGIISPDGTDACQ HEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SNGKEKTYVRRCGAEDNAGKLFHALYEPATVYDPTRRVRDIPATEVWAFKQQPLIDPIKK CCCCCCHHHHHCCCCCCHHHHHHHHHCCCCEECCHHHHHCCCCHHEEEECCCCCCCHHHC SDGKIAPDGIFWLPFSTARRKNFDMADTGYLYVPPSCRSSGSRCRIHIALHGCKQTAKEF CCCCCCCCCEEEEECCHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECHHHHHHHH AVTAGYNNWADYYKVIVIYPALDHQTSMDGEVCAMPAALRIADSSWVKPNPNACWDWWGY EEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHCCC LDDETPQARRYLTSKAPQMRVIESIIGEATR CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure MRRQFKIFAFVILTALGTARADDGRGLARSGNPNEVSISGVSSGAAMAIQYAVAHSSSIV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCEE GVGAVAGPGWGCADGRLSVAINDCMCGRQPTAPHVAGARAQAASGSIDQLVAGKPVALQR EEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCEEEEH SYVFQSPEDHTVVKQSGQASIDFLAAFIGKAPVVDRGNAADGSNRAGHGIISPDGTDACQ HEECCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SNGKEKTYVRRCGAEDNAGKLFHALYEPATVYDPTRRVRDIPATEVWAFKQQPLIDPIKK CCCCCCHHHHHCCCCCCHHHHHHHHHCCCCEECCHHHHHCCCCHHEEEECCCCCCCHHHC SDGKIAPDGIFWLPFSTARRKNFDMADTGYLYVPPSCRSSGSRCRIHIALHGCKQTAKEF CCCCCCCCCEEEEECCHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECHHHHHHHH AVTAGYNNWADYYKVIVIYPALDHQTSMDGEVCAMPAALRIADSSWVKPNPNACWDWWGY EEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCHHCCC LDDETPQARRYLTSKAPQMRVIESIIGEATR CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA