| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is boxC [H]
Identifier: 73541019
GI number: 73541019
Start: 1420045
End: 1421727
Strand: Reverse
Name: boxC [H]
Synonym: Reut_A1325
Alternate gene names: 73541019
Gene position: 1421727-1420045 (Counterclockwise)
Preceding gene: 73541020
Following gene: 73541018
Centisome position: 37.35
GC content: 66.01
Gene sequence:
>1683_bases ATGTCCGCGCCGGCCACCGCCCCCACTCAAGCCGCTGAACCCGTCACGTTCGAACGCCACCCCGAGCAATACCGCCACTG GAAGCTCACATTTGACGGCCCGGTCGCCACGCTGGCGATGGATGTCGACGAAGAAGGCGGCCTGCGGCCGGGCTACACGC TGAAGCTGAACTCCTATGACCTCGGCGTCGATATCGAACTGCACGACGCCCTGCAGCGCATCCGTTTCGAGCACCCGGAA GTGCGCACGGTGGTGATGACCAGCGCACGCGACCGCATCTTCTGCTCGGGCGCCAATATCTTCATGCTCGGCCAGTCGAC GCACGCGTGGAAGGTGAACTTCTGCAAGTTCACCAACGAGACGCGCAACGGCATCGAAGACGCCAGCCGCCATTCGGGCC TCAAGTTCATCGCGGCGTGCAACGGCACCACAGCCGGCGGCGGCTATGAACTCGCCCTGGCCTGCGACGAAATCGTGCTG GTCGACGATCGCTCTTCGGCCGTGAGCCTGCCGGAAGTGCCACTGCTCGGCGTGCTTCCCGGCACCGGCGGCCTGACCCG CGTGACGGACAAGCGACGCGTGCGTCGCGACCATGCCGACATTTTCTGCACCACGACCGAAGGCGTGCGCGGACAGCGCG CCAAGGACTGGAAGCTCGTCGACGACGTGGTCAAACCCGCGCGCTTTACCGAATACATTGCCGAGCGCGCGGCCGCGCTG GCCGCCACCAGCGATCGCCCGCAGAACCACCACGGCATCGAACTGACCCCGCTGTCGCGCACCGTCGAGGAAGACGGCTA CCGCTATGACACGGTGCGCGTCCATTTCGACCGCGCCGCGCGCAAGGCCACGATCACCGTATTCGGCCCCGACCGACACC AGCCCACGGACCTCGCGGGCGTTGTCTCGGCGGGCGCGCAATGGTGGCCGCTCAAGATGGCGCGCGAACTGGATGACGCG ATCCTGACGCTGCGCACGAACCATCTCGATATCGGCATGTGGATCATGAAGACTGACGGCGACGCGGCAGCCGTCCTGGC TGCCGATGCGCTGATGGAAGCGCACGCCAGCCACTGGTTCGTGCGCGAAACGATCGGCATGCTGCGCCGTACGCTTGCGC GGCTCGATGTGTCGTCGCGCAGCCTGTTCGCGCTGATCGAGCAGGACTCGTGCTTCGCCGGCACGCTGCTGGAACTGGCA CTGGCGGCGGATCGCAGCTACATGCTGCATCTGCCCGACGCACCTGACGATGCGCCGCGCGTCTTCCTCAGCGAAGCCAA CTTCGGCCGCTACCCGATGCCCAATGGGCTGTCACGGCTGGCCGCGCGCTTCTATGGGGACGAAGCCGCCATTACCGCAG CACGTGAACACATCGGCCAGCCGCTCGATGCACTGAGCGCCGATTCACTGAGCCTGATTACCGCCGCGCCCGACGATATG GACTGGGAAGACGAGATCCGCATCGCTGTGGAGGAGCGCGCCAGCCTGTCCCCCGATGCACTCACCGGCCTGGAAGCGAA CCTGCGCTTCGGCCCGGGCGAAACCATGGAAACCCGGATCTTCGGACGCCTGACGGCCTGGCAGAACTGGATCTTCAACC GCCCCAACGCGGTGGGCGAGAACGGCGCGCTCAAGGTTTTCGGGAGCGGGAACAAGCCCCGTTTCGACTGGAACCGCGTC TGA
Upstream 100 bases:
>100_bases GCCCTCGGCACGGCGTGCAGAAAGGTATTGCACCCTCCGTCACCATGCACTATATTTCATCGAAAGCCGCAAGGCACTAT AGTGCATTAAGGAGACAGCC
Downstream 100 bases:
>100_bases CGCCATAACGACCTGCAAGGAGACACGCCGTGAGCATCGACTACAGCCAGAAGATCCCGAACAACGTCAACCTGGCGGAC GACCGCGCGCTGCAGCGCGC
Product: benzoyl-CoA-dihydrodiol lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MSAPATAPTQAAEPVTFERHPEQYRHWKLTFDGPVATLAMDVDEEGGLRPGYTLKLNSYDLGVDIELHDALQRIRFEHPE VRTVVMTSARDRIFCSGANIFMLGQSTHAWKVNFCKFTNETRNGIEDASRHSGLKFIAACNGTTAGGGYELALACDEIVL VDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTTTEGVRGQRAKDWKLVDDVVKPARFTEYIAERAAAL AATSDRPQNHHGIELTPLSRTVEEDGYRYDTVRVHFDRAARKATITVFGPDRHQPTDLAGVVSAGAQWWPLKMARELDDA ILTLRTNHLDIGMWIMKTDGDAAAVLAADALMEAHASHWFVRETIGMLRRTLARLDVSSRSLFALIEQDSCFAGTLLELA LAADRSYMLHLPDAPDDAPRVFLSEANFGRYPMPNGLSRLAARFYGDEAAITAAREHIGQPLDALSADSLSLITAAPDDM DWEDEIRIAVEERASLSPDALTGLEANLRFGPGETMETRIFGRLTAWQNWIFNRPNAVGENGALKVFGSGNKPRFDWNRV
Sequences:
>Translated_560_residues MSAPATAPTQAAEPVTFERHPEQYRHWKLTFDGPVATLAMDVDEEGGLRPGYTLKLNSYDLGVDIELHDALQRIRFEHPE VRTVVMTSARDRIFCSGANIFMLGQSTHAWKVNFCKFTNETRNGIEDASRHSGLKFIAACNGTTAGGGYELALACDEIVL VDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTTTEGVRGQRAKDWKLVDDVVKPARFTEYIAERAAAL AATSDRPQNHHGIELTPLSRTVEEDGYRYDTVRVHFDRAARKATITVFGPDRHQPTDLAGVVSAGAQWWPLKMARELDDA ILTLRTNHLDIGMWIMKTDGDAAAVLAADALMEAHASHWFVRETIGMLRRTLARLDVSSRSLFALIEQDSCFAGTLLELA LAADRSYMLHLPDAPDDAPRVFLSEANFGRYPMPNGLSRLAARFYGDEAAITAAREHIGQPLDALSADSLSLITAAPDDM DWEDEIRIAVEERASLSPDALTGLEANLRFGPGETMETRIFGRLTAWQNWIFNRPNAVGENGALKVFGSGNKPRFDWNRV >Mature_559_residues SAPATAPTQAAEPVTFERHPEQYRHWKLTFDGPVATLAMDVDEEGGLRPGYTLKLNSYDLGVDIELHDALQRIRFEHPEV RTVVMTSARDRIFCSGANIFMLGQSTHAWKVNFCKFTNETRNGIEDASRHSGLKFIAACNGTTAGGGYELALACDEIVLV DDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTTTEGVRGQRAKDWKLVDDVVKPARFTEYIAERAAALA ATSDRPQNHHGIELTPLSRTVEEDGYRYDTVRVHFDRAARKATITVFGPDRHQPTDLAGVVSAGAQWWPLKMARELDDAI LTLRTNHLDIGMWIMKTDGDAAAVLAADALMEAHASHWFVRETIGMLRRTLARLDVSSRSLFALIEQDSCFAGTLLELAL AADRSYMLHLPDAPDDAPRVFLSEANFGRYPMPNGLSRLAARFYGDEAAITAAREHIGQPLDALSADSLSLITAAPDDMD WEDEIRIAVEERASLSPDALTGLEANLRFGPGETMETRIFGRLTAWQNWIFNRPNAVGENGALKVFGSGNKPRFDWNRV
Specific function: Catalyzes the ring opening of 2,3-dihydro-2,3- dihydroxybenzoyl-CoA to form 3,4-dehydroadipyl-CoA semialdehyde [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the benzoyl-CoA oxygenase component C family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=231, Percent_Identity=29.4372294372294, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1788682, Length=221, Percent_Identity=32.1266968325792, Blast_Score=79, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017633 - InterPro: IPR001753 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.2.44 [H]
Molecular weight: Translated: 61913; Mature: 61782
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPATAPTQAAEPVTFERHPEQYRHWKLTFDGPVATLAMDVDEEGGLRPGYTLKLNSYD CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCEEEEECCEE LGVDIELHDALQRIRFEHPEVRTVVMTSARDRIFCSGANIFMLGQSTHAWKVNFCKFTNE CEEEEEHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCEEEEEEEEECCH TRNGIEDASRHSGLKFIAACNGTTAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP HHCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEEC GTGGLTRVTDKRRVRRDHADIFCTTTEGVRGQRAKDWKLVDDVVKPARFTEYIAERAAAL CCCCCEECHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHH AATSDRPQNHHGIELTPLSRTVEEDGYRYDTVRVHFDRAARKATITVFGPDRHQPTDLAG HCCCCCCCCCCCEEEEECHHHHHHCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHH VVSAGAQWWPLKMARELDDAILTLRTNHLDIGMWIMKTDGDAAAVLAADALMEAHASHWF HHHCCCCEEHHHHHHHHCCEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH VRETIGMLRRTLARLDVSSRSLFALIEQDSCFAGTLLELALAADRSYMLHLPDAPDDAPR HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCE VFLSEANFGRYPMPNGLSRLAARFYGDEAAITAAREHIGQPLDALSADSLSLITAAPDDM EEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCC DWEDEIRIAVEERASLSPDALTGLEANLRFGPGETMETRIFGRLTAWQNWIFNRPNAVGE CCCCCEEEEEECCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC NGALKVFGSGNKPRFDWNRV CCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SAPATAPTQAAEPVTFERHPEQYRHWKLTFDGPVATLAMDVDEEGGLRPGYTLKLNSYD CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCEEEEECCEE LGVDIELHDALQRIRFEHPEVRTVVMTSARDRIFCSGANIFMLGQSTHAWKVNFCKFTNE CEEEEEHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCEEEEEEEEECCH TRNGIEDASRHSGLKFIAACNGTTAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP HHCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEEC GTGGLTRVTDKRRVRRDHADIFCTTTEGVRGQRAKDWKLVDDVVKPARFTEYIAERAAAL CCCCCEECHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHH AATSDRPQNHHGIELTPLSRTVEEDGYRYDTVRVHFDRAARKATITVFGPDRHQPTDLAG HCCCCCCCCCCCEEEEECHHHHHHCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHH VVSAGAQWWPLKMARELDDAILTLRTNHLDIGMWIMKTDGDAAAVLAADALMEAHASHWF HHHCCCCEEHHHHHHHHCCEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH VRETIGMLRRTLARLDVSSRSLFALIEQDSCFAGTLLELALAADRSYMLHLPDAPDDAPR HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCE VFLSEANFGRYPMPNGLSRLAARFYGDEAAITAAREHIGQPLDALSADSLSLITAAPDDM EEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCC DWEDEIRIAVEERASLSPDALTGLEANLRFGPGETMETRIFGRLTAWQNWIFNRPNAVGE CCCCCEEEEEECCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC NGALKVFGSGNKPRFDWNRV CCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12399500 [H]