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The map label for this gene is glcD [H]

Identifier: 73540942

GI number: 73540942

Start: 1331979

End: 1333397

Strand: Reverse

Name: glcD [H]

Synonym: Reut_A1247

Alternate gene names: 73540942

Gene position: 1333397-1331979 (Counterclockwise)

Preceding gene: 73540943

Following gene: 73540933

Centisome position: 35.03

GC content: 65.89

Gene sequence:

>1419_bases
ATGCCTGCCTCGCACCACGACTCCTTCCTCGATCTCTGCCGCGCCGCACTCGGTCCCCAGCACGTGTTGACCGATGCCGC
CGACAAGGCGCCCTACCTGACCGACTGGCGCAAGCGCTACACCGGCGACGCCATTGCCATACTGCGCCCGGCCAATGCCG
AGGAAGTCGCCGCCGCCGTGCATGCATGCCACGCCCACAAGATCGCCGTGGTGCCGCAGGGCGGCAATACCGGCCTGTGC
GGGGGCGCTACGCCGACCACGACGGATTCCGTGGTGATTTCGCTGCAGCGGCTGAACCGCGTACGGCAGGTCGATCCGCT
CAATAACACCATCACGGTCGAATCCGGCGTCGTGCTGCAGCATCTGCAGGACGTGGCGCACGAACACGGCAGGCTGTTTC
CGCTGAGTCTCGCGGCCGAAGGTAGCTGCACCATCGGCGGCAACCTGTCCACGAACGCTGGCGGCACCGCGGTGCTGCGC
TACGGCAATACGCGCGAACTCTGCCTGGGGCTGGAAGTCGTGACGCCGAAGGGCGAGATCTGGCACGGCCTGCGCGGCCT
GCGCAAGGACAATACGGGCTACGATTTGCGTGACCTGTTCATCGGCGCCGAAGGCACGCTCGGCATCATCACGGCTGCCG
TCATGAAGCTGTTCCCGCTGCCGCGCGCGAGCGTCACGGCGCTGGCGGCCGTGGCGAGCCCGCGTGCGGCGCTGGCGCTG
CTGGCCATCGCACAGTCGCATGCCGGCGCCATGCTGACCGGCTTCGAGCTGATGTCCGCGCTGAGCATGCAGCTCGTCAC
CACGCACTTCCCGCAGCTGCGCTACCCGTTTTCCGAGGTGCATCCGCAACTTGTGCTGATGGAGCTGTCCGATAGCGAAA
GCGAAGACCACGCGCGCGCGATCTTCGAAAGGCTGATGCAGGTCGCCCTCGACGCCGGCGTGGTCATCGACGCCGTGGTC
GCGGAATCCGTTCAGCAGTCGCGAGACTTCTGGAACCTGCGCGAACATATTCCGCTCGCGCAGGTCGAGGAAGGAAAAAA
CATCAAGCACGACATCGCCGTGCCCGTGTCGCGCGTGGCCGATTTCATCGAGACGACGGACGCATTGCTGCAGGTGTCGT
TTCCGGGCGCGCGCATGGTGACCTTCGGCCACCTCGGCGACGGCAACCTGCACTACAACGTATCGCCGCCGGCTGGCGTC
GATCATGACGACTTCCTGCGCAACCAGGACGCCGTCAACCGCGTCGTGCATGACAGCGTGCATTCGCACGGCGGCTCGAT
CTCCGCCGAGCACGGCCTGGGCCAGCTCAAGCGCGAGGAGAACCGCCTTTACAAGAGCGAGGTAGAGCTGGCGATGATGC
GTGCCATCAAGCAGGCACTGGACCCGCTGGGGCTGATGAACCCCGGCAAGGTCATCTGA

Upstream 100 bases:

>100_bases
TCTTCAGCACCATCTTTTACCTGCGCCCGTACAAGCGCCGGGCCAAGGCGTTGAAGACCACCTCGGCCGACACCGGCAAG
TAGACGCACCCGGACACGAC

Downstream 100 bases:

>100_bases
ACGCCGGCACCTCGCTGCGCACATAGGCCGCCACGGCCTCCAGCAGCAGATCAAGGTGCGCGCGCAGCATCGCAAACCCT
TCGCTGCGGACAAAGCGCGA

Product: FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MPASHHDSFLDLCRAALGPQHVLTDAADKAPYLTDWRKRYTGDAIAILRPANAEEVAAAVHACHAHKIAVVPQGGNTGLC
GGATPTTTDSVVISLQRLNRVRQVDPLNNTITVESGVVLQHLQDVAHEHGRLFPLSLAAEGSCTIGGNLSTNAGGTAVLR
YGNTRELCLGLEVVTPKGEIWHGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLFPLPRASVTALAAVASPRAALAL
LAIAQSHAGAMLTGFELMSALSMQLVTTHFPQLRYPFSEVHPQLVLMELSDSESEDHARAIFERLMQVALDAGVVIDAVV
AESVQQSRDFWNLREHIPLAQVEEGKNIKHDIAVPVSRVADFIETTDALLQVSFPGARMVTFGHLGDGNLHYNVSPPAGV
DHDDFLRNQDAVNRVVHDSVHSHGGSISAEHGLGQLKREENRLYKSEVELAMMRAIKQALDPLGLMNPGKVI

Sequences:

>Translated_472_residues
MPASHHDSFLDLCRAALGPQHVLTDAADKAPYLTDWRKRYTGDAIAILRPANAEEVAAAVHACHAHKIAVVPQGGNTGLC
GGATPTTTDSVVISLQRLNRVRQVDPLNNTITVESGVVLQHLQDVAHEHGRLFPLSLAAEGSCTIGGNLSTNAGGTAVLR
YGNTRELCLGLEVVTPKGEIWHGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLFPLPRASVTALAAVASPRAALAL
LAIAQSHAGAMLTGFELMSALSMQLVTTHFPQLRYPFSEVHPQLVLMELSDSESEDHARAIFERLMQVALDAGVVIDAVV
AESVQQSRDFWNLREHIPLAQVEEGKNIKHDIAVPVSRVADFIETTDALLQVSFPGARMVTFGHLGDGNLHYNVSPPAGV
DHDDFLRNQDAVNRVVHDSVHSHGGSISAEHGLGQLKREENRLYKSEVELAMMRAIKQALDPLGLMNPGKVI
>Mature_471_residues
PASHHDSFLDLCRAALGPQHVLTDAADKAPYLTDWRKRYTGDAIAILRPANAEEVAAAVHACHAHKIAVVPQGGNTGLCG
GATPTTTDSVVISLQRLNRVRQVDPLNNTITVESGVVLQHLQDVAHEHGRLFPLSLAAEGSCTIGGNLSTNAGGTAVLRY
GNTRELCLGLEVVTPKGEIWHGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLFPLPRASVTALAAVASPRAALALL
AIAQSHAGAMLTGFELMSALSMQLVTTHFPQLRYPFSEVHPQLVLMELSDSESEDHARAIFERLMQVALDAGVVIDAVVA
ESVQQSRDFWNLREHIPLAQVEEGKNIKHDIAVPVSRVADFIETTDALLQVSFPGARMVTFGHLGDGNLHYNVSPPAGVD
HDDFLRNQDAVNRVVHDSVHSHGGSISAEHGLGQLKREENRLYKSEVELAMMRAIKQALDPLGLMNPGKVI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=455, Percent_Identity=38.6813186813187, Blast_Score=279, Evalue=5e-75,
Organism=Homo sapiens, GI37595756, Length=473, Percent_Identity=30.2325581395349, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI37595754, Length=496, Percent_Identity=29.0322580645161, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI4501993, Length=465, Percent_Identity=24.0860215053763, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI1789351, Length=448, Percent_Identity=29.9107142857143, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1787977, Length=504, Percent_Identity=25.3968253968254, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI48994907, Length=502, Percent_Identity=22.9083665338645, Blast_Score=85, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17534361, Length=451, Percent_Identity=35.920177383592, Blast_Score=278, Evalue=6e-75,
Organism=Caenorhabditis elegans, GI71992373, Length=438, Percent_Identity=29.2237442922374, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=440, Percent_Identity=29.3181818181818, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI71992392, Length=363, Percent_Identity=29.4765840220386, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=467, Percent_Identity=24.1970021413276, Blast_Score=100, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6320023, Length=473, Percent_Identity=36.5750528541226, Blast_Score=324, Evalue=2e-89,
Organism=Saccharomyces cerevisiae, GI6320764, Length=469, Percent_Identity=32.8358208955224, Blast_Score=275, Evalue=1e-74,
Organism=Saccharomyces cerevisiae, GI6320027, Length=436, Percent_Identity=29.5871559633028, Blast_Score=158, Evalue=1e-39,
Organism=Drosophila melanogaster, GI18921117, Length=460, Percent_Identity=36.9565217391304, Blast_Score=276, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24639277, Length=460, Percent_Identity=36.9565217391304, Blast_Score=276, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24639275, Length=460, Percent_Identity=36.9565217391304, Blast_Score=276, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24653753, Length=213, Percent_Identity=28.6384976525822, Blast_Score=86, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50826; Mature: 50694

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASHHDSFLDLCRAALGPQHVLTDAADKAPYLTDWRKRYTGDAIAILRPANAEEVAAAV
CCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHH
HACHAHKIAVVPQGGNTGLCGGATPTTTDSVVISLQRLNRVRQVDPLNNTITVESGVVLQ
HHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
HLQDVAHEHGRLFPLSLAAEGSCTIGGNLSTNAGGTAVLRYGNTRELCLGLEVVTPKGEI
HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCHHH
WHGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLFPLPRASVTALAAVASPRAALAL
HHHHHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
LAIAQSHAGAMLTGFELMSALSMQLVTTHFPQLRYPFSEVHPQLVLMELSDSESEDHARA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCCCHHHHHH
IFERLMQVALDAGVVIDAVVAESVQQSRDFWNLREHIPLAQVEEGKNIKHDIAVPVSRVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHCCCHHHHH
DFIETTDALLQVSFPGARMVTFGHLGDGNLHYNVSPPAGVDHDDFLRNQDAVNRVVHDSV
HHHHHHHHHEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHH
HSHGGSISAEHGLGQLKREENRLYKSEVELAMMRAIKQALDPLGLMNPGKVI
HHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PASHHDSFLDLCRAALGPQHVLTDAADKAPYLTDWRKRYTGDAIAILRPANAEEVAAAV
CCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHH
HACHAHKIAVVPQGGNTGLCGGATPTTTDSVVISLQRLNRVRQVDPLNNTITVESGVVLQ
HHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
HLQDVAHEHGRLFPLSLAAEGSCTIGGNLSTNAGGTAVLRYGNTRELCLGLEVVTPKGEI
HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCHHH
WHGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLFPLPRASVTALAAVASPRAALAL
HHHHHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
LAIAQSHAGAMLTGFELMSALSMQLVTTHFPQLRYPFSEVHPQLVLMELSDSESEDHARA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCCCCHHHHHH
IFERLMQVALDAGVVIDAVVAESVQQSRDFWNLREHIPLAQVEEGKNIKHDIAVPVSRVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHCCCHHHHH
DFIETTDALLQVSFPGARMVTFGHLGDGNLHYNVSPPAGVDHDDFLRNQDAVNRVVHDSV
HHHHHHHHHEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHH
HSHGGSISAEHGLGQLKREENRLYKSEVELAMMRAIKQALDPLGLMNPGKVI
HHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]