| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is pyrG [H]
Identifier: 73540790
GI number: 73540790
Start: 1181826
End: 1183478
Strand: Direct
Name: pyrG [H]
Synonym: Reut_A1088
Alternate gene names: 73540790
Gene position: 1181826-1183478 (Clockwise)
Preceding gene: 73540789
Following gene: 73540791
Centisome position: 31.05
GC content: 63.46
Gene sequence:
>1653_bases ATGACCAAATTCGTCTTCGTCACCGGTGGCGTCGTCTCTTCTCTCGGCAAGGGCATCGCTGCCGCCTCGCTCGCGGCTAT TCTCGAGTCGCGCGGCCTCAAAGTCACCCTCCTCAAGCTAGATCCCTACATCAACGTCGATCCCGGCACGATGAGCCCCT TCCAGCATGGCGAGGTGTTTGTCACGGAAGACGGTGCGGAAACCGACCTCGATCTTGGCCACTACGAGCGCTTCGTCTCG GCCAAGATGCGCAAGTCGAACAACTTCACTACGGGCCAAATCTACGAATCGGTGATCCGCAAGGAGCGCCGCGGCGAATA CCTGGGCAAGACCGTGCAGGTGATTCCGCATATCACCAACGAGATCCAGGCCTTTATCGAGCGTGGCGCTGCAGCGTCGC ACGACGGCAAGGCTGATGTGGCGCTGGTGGAAATCGGCGGCACCGTCGGTGACATCGAATCGCTGCCGTTCCTGGAAGCC GCGCGCCAGATGAGCCTGCGCATGGGCCGCAACCGCTGCGCGTTCGTGCACCTGACCCTGGTGCCGTTCATTGCCAGCGC CGGCGAGCTGAAGACCAAGCCGACCCAGCACTCGGTGCAGAAGCTGCGTGAAATCGGCATTTCGCCGACCGCGCTGCTGT GCCGCGCTGACCGTCCGATCCCGGACGACGAGCGCGCCAAGATTTCGCTGTTCGCCAACATCCCGCAAGACGCCGTGATT TCGGTGTGGGATGCCGACAGCATCTACAAGATCCCGCAGATGCTCAACGAGCAGGGCCTGGACCGCCTGATCTGCGAAGA GCTGCGCCTGGACCCGAAGCCGGCCGACCTGTCGATGTGGCAGAAGCTGGTGAACGCGCAGGAAAACCCCGAGCACGAAA TCACCATCGGCATGGTCGGCAAGTACGTCGACCTGACCGAGTCGTACAAGTCGTTGATCGAGGCGCTGCGCCACGCCGGC ATGCACACCGCCACGCGCGTGAACATCGAGTACATCGATTCCGAAGAACTCGAATCGGGCCATCTCGAAGTGCTGGCCCC GCTGGACGCCATCCTGGTGCCGGGCGGTTTCGGCAAGCGCGGCACGGAAGGCAAGATCCGCGCGATCCAGTACGCCCGCG AGAACAAGGTTCCGTACCTGGGCATCTGCCTGGGCATGCAGCTCGCCGTGATCGAGTTCGCCCGTCACGTGGCTGGCATG ACCGACGCCAACTCGACCGAGTTCAACCTGGAAACCGAACATCCGGTGGTCGCGCTGATCACGGAGTGGGTGGACCGCGA AGGCAAGGTCGAGCAGCGTTCGGCCGAATCCGACCTGGGCGGCACCATGCGCCTGGGTGCCCAACGCGTACCGGTGAAGG AAGGGACCAAGGCGGCGTCGATCTACGGCGCGGAGGTCAACGAGCGTCACCGTCACCGCTACGAAGTCAACAACCACTAT GTGCCGACGCTGGAAAACGCCGGCATGGTGATTTCGGCCCGTACCCCGACCGAGAACCTGCCCGAGATGATGGAACTGCC GGGGTCGATGCACCCGTGGTTCGTCGGCGTGCAGTTCCACCCGGAATTCACCTCCACGCCGCGTGACGGCCATCCGCTGT TCAAGGCCTACGTCGAAGCCGCGCTGGCTGGCCAGCAGCGCAAGGGCGCCTGA
Upstream 100 bases:
>100_bases TGCGCCGCAGGCGTTGCGCAAGGCGGTGGTGTCGCAATTCGCGGCCGTTCGGGGGCCGGGGTCTCATGTATAATCCTAAT TTCCCCGGCAAGCTCGGTTT
Downstream 100 bases:
>100_bases AGCCGGCGCCGAGCAGGAGACTGTCATGAAACTCTGCGGATTCGAGGTTGGCCTCGACAAGCCGTTCTTTCTGATTGCCG GCCCGTGCGTGATCGAGTCG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVS AKMRKSNNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAAASHDGKADVALVEIGGTVGDIESLPFLEA ARQMSLRMGRNRCAFVHLTLVPFIASAGELKTKPTQHSVQKLREIGISPTALLCRADRPIPDDERAKISLFANIPQDAVI SVWDADSIYKIPQMLNEQGLDRLICEELRLDPKPADLSMWQKLVNAQENPEHEITIGMVGKYVDLTESYKSLIEALRHAG MHTATRVNIEYIDSEELESGHLEVLAPLDAILVPGGFGKRGTEGKIRAIQYARENKVPYLGICLGMQLAVIEFARHVAGM TDANSTEFNLETEHPVVALITEWVDREGKVEQRSAESDLGGTMRLGAQRVPVKEGTKAASIYGAEVNERHRHRYEVNNHY VPTLENAGMVISARTPTENLPEMMELPGSMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAGQQRKGA
Sequences:
>Translated_550_residues MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVS AKMRKSNNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAAASHDGKADVALVEIGGTVGDIESLPFLEA ARQMSLRMGRNRCAFVHLTLVPFIASAGELKTKPTQHSVQKLREIGISPTALLCRADRPIPDDERAKISLFANIPQDAVI SVWDADSIYKIPQMLNEQGLDRLICEELRLDPKPADLSMWQKLVNAQENPEHEITIGMVGKYVDLTESYKSLIEALRHAG MHTATRVNIEYIDSEELESGHLEVLAPLDAILVPGGFGKRGTEGKIRAIQYARENKVPYLGICLGMQLAVIEFARHVAGM TDANSTEFNLETEHPVVALITEWVDREGKVEQRSAESDLGGTMRLGAQRVPVKEGTKAASIYGAEVNERHRHRYEVNNHY VPTLENAGMVISARTPTENLPEMMELPGSMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAGQQRKGA >Mature_549_residues TKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVSA KMRKSNNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAAASHDGKADVALVEIGGTVGDIESLPFLEAA RQMSLRMGRNRCAFVHLTLVPFIASAGELKTKPTQHSVQKLREIGISPTALLCRADRPIPDDERAKISLFANIPQDAVIS VWDADSIYKIPQMLNEQGLDRLICEELRLDPKPADLSMWQKLVNAQENPEHEITIGMVGKYVDLTESYKSLIEALRHAGM HTATRVNIEYIDSEELESGHLEVLAPLDAILVPGGFGKRGTEGKIRAIQYARENKVPYLGICLGMQLAVIEFARHVAGMT DANSTEFNLETEHPVVALITEWVDREGKVEQRSAESDLGGTMRLGAQRVPVKEGTKAASIYGAEVNERHRHRYEVNNHYV PTLENAGMVISARTPTENLPEMMELPGSMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAGQQRKGA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=564, Percent_Identity=44.8581560283688, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=559, Percent_Identity=43.649373881932, Blast_Score=468, Evalue=1e-132, Organism=Homo sapiens, GI28559083, Length=559, Percent_Identity=43.649373881932, Blast_Score=468, Evalue=1e-132, Organism=Homo sapiens, GI221316689, Length=559, Percent_Identity=43.649373881932, Blast_Score=468, Evalue=1e-132, Organism=Escherichia coli, GI1789142, Length=548, Percent_Identity=61.8613138686131, Blast_Score=687, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=611, Percent_Identity=38.1342062193126, Blast_Score=415, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=41.0526315789474, Blast_Score=444, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322563, Length=574, Percent_Identity=41.8118466898955, Blast_Score=439, Evalue=1e-124, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=44.8214285714286, Blast_Score=473, Evalue=1e-133, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=43.5643564356436, Blast_Score=400, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60684; Mature: 60553
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFVSAKMRKSNNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EIQAFIERGAAASHDGKADVALVEIGGTVGDIESLPFLEAARQMSLRMGRNRCAFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEH VPFIASAGELKTKPTQHSVQKLREIGISPTALLCRADRPIPDDERAKISLFANIPQDAVI HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE SVWDADSIYKIPQMLNEQGLDRLICEELRLDPKPADLSMWQKLVNAQENPEHEITIGMVG EEECCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECC KYVDLTESYKSLIEALRHAGMHTATRVNIEYIDSEELESGHLEVLAPLDAILVPGGFGKR CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCC GTEGKIRAIQYARENKVPYLGICLGMQLAVIEFARHVAGMTDANSTEFNLETEHPVVALI CCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHH TEWVDREGKVEQRSAESDLGGTMRLGAQRVPVKEGTKAASIYGAEVNERHRHRYEVNNHY HHHHCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHEECCCCC VPTLENAGMVISARTPTENLPEMMELPGSMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA CCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAGQQRKGA HHCCCCCCCC >Mature Secondary Structure TKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFVSAKMRKSNNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EIQAFIERGAAASHDGKADVALVEIGGTVGDIESLPFLEAARQMSLRMGRNRCAFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEH VPFIASAGELKTKPTQHSVQKLREIGISPTALLCRADRPIPDDERAKISLFANIPQDAVI HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE SVWDADSIYKIPQMLNEQGLDRLICEELRLDPKPADLSMWQKLVNAQENPEHEITIGMVG EEECCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECC KYVDLTESYKSLIEALRHAGMHTATRVNIEYIDSEELESGHLEVLAPLDAILVPGGFGKR CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCC GTEGKIRAIQYARENKVPYLGICLGMQLAVIEFARHVAGMTDANSTEFNLETEHPVVALI CCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHH TEWVDREGKVEQRSAESDLGGTMRLGAQRVPVKEGTKAASIYGAEVNERHRHRYEVNNHY HHHHCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHEECCCCC VPTLENAGMVISARTPTENLPEMMELPGSMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA CCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAGQQRKGA HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]