| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73540770
Identifier: 73540770
GI number: 73540770
Start: 1157861
End: 1158700
Strand: Reverse
Name: 73540770
Synonym: Reut_A1068
Alternate gene names: NA
Gene position: 1158700-1157861 (Counterclockwise)
Preceding gene: 73540771
Following gene: 73540769
Centisome position: 30.44
GC content: 66.79
Gene sequence:
>840_bases ATGATGGCGCCGCGCGAGCTCGCGCGCCCCTATCTGGCCGCGTTCCGGTCGCGGTTCCTGCAGATGCTGCAGTACAGGCT GGCGGCCTACGCGGGCTTTTTTACGCAGTGCTGGTGGGGCGGCATCAAGATCATGGTGCTGGCGGCGTTTTATGGCAGCG CTTCCACGCGTGAGGCCCCGCTCACGCTCGGTCAGGTCATCACCTATACCTGGCTGGCGCAAGGACTGCTGGCGCTGCTG CCATGGAGCGGCGATCCTGAAGTAGCGCAAGCCGTGCGCACGGGCGCCGTCGCGTACGACCGGCTGCGGCCGGTCAATGC CTACGCGTTGTGGTTTGCACGCACCGCGGGCTGGACGGCAGCGCGCGTATTGCCACGCGTGACGATGATGCTCACCTTCG CCGGCGTCTTGCTGCCCATTGTCGGACTCGGCGATTGGGCCTGGGAGCCGCCGGCGGGTCTGGCCGCGGGCATGGGTTTC ATCGCGTCGGCACTGCTGGCCCTGCTGCTGTCCACATCGCTCGTGATGCTGCTCAATATCGCGGCCGCAGCGGCACTCAA TGAACGGGGCATCAATACGCTTGCGGTGCCGGTGGTCATCGTGTTGTCGGGAAACCTGTTGCCGCTGGCGCTGCTGCCCG ATGCCTGGCAGGCGGCGCTGCTGGCGCAGCCGCTGGCCGGCGTGATGGACATCCCGGCACGCATCTATTTCGGGCAACTC GGCGGCGCGCAGATGTTCACCGCGTTGGGTCTGCAATGCCTGTGGATCATGCTGCTGGTGGCAACCGGCCACGCTGCCAT GGGCCGCACGATGCGCCGGCTTGAAGTGCAAGGTGGGTGA
Upstream 100 bases:
>100_bases CGATGATGGCCTGCCCGACGACGCAGAAGACGAGGGCATGGCCATCGAAGCCGTCATCGCGCGCTTCTACGCGATGCACG GCGCAGCGGAGGCTTGAGCC
Downstream 100 bases:
>100_bases CGCGCATGAATTCCCTGGCATTGTTCGCCCGCCTCGTGACGGCCTCGCTAAGCGGCCAGGCACGCTATCCCGGCTCGGCC ATGATGCTGACCTTCGGGCA
Product: putative ABC transporter permease protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC-2 Type Transporter
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MMAPRELARPYLAAFRSRFLQMLQYRLAAYAGFFTQCWWGGIKIMVLAAFYGSASTREAPLTLGQVITYTWLAQGLLALL PWSGDPEVAQAVRTGAVAYDRLRPVNAYALWFARTAGWTAARVLPRVTMMLTFAGVLLPIVGLGDWAWEPPAGLAAGMGF IASALLALLLSTSLVMLLNIAAAAALNERGINTLAVPVVIVLSGNLLPLALLPDAWQAALLAQPLAGVMDIPARIYFGQL GGAQMFTALGLQCLWIMLLVATGHAAMGRTMRRLEVQGG
Sequences:
>Translated_279_residues MMAPRELARPYLAAFRSRFLQMLQYRLAAYAGFFTQCWWGGIKIMVLAAFYGSASTREAPLTLGQVITYTWLAQGLLALL PWSGDPEVAQAVRTGAVAYDRLRPVNAYALWFARTAGWTAARVLPRVTMMLTFAGVLLPIVGLGDWAWEPPAGLAAGMGF IASALLALLLSTSLVMLLNIAAAAALNERGINTLAVPVVIVLSGNLLPLALLPDAWQAALLAQPLAGVMDIPARIYFGQL GGAQMFTALGLQCLWIMLLVATGHAAMGRTMRRLEVQGG >Mature_279_residues MMAPRELARPYLAAFRSRFLQMLQYRLAAYAGFFTQCWWGGIKIMVLAAFYGSASTREAPLTLGQVITYTWLAQGLLALL PWSGDPEVAQAVRTGAVAYDRLRPVNAYALWFARTAGWTAARVLPRVTMMLTFAGVLLPIVGLGDWAWEPPAGLAAGMGF IASALLALLLSTSLVMLLNIAAAAALNERGINTLAVPVVIVLSGNLLPLALLPDAWQAALLAQPLAGVMDIPARIYFGQL GGAQMFTALGLQCLWIMLLVATGHAAMGRTMRRLEVQGG
Specific function: Unknown
COG id: COG4587
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29932; Mature: 29932
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAPRELARPYLAAFRSRFLQMLQYRLAAYAGFFTQCWWGGIKIMVLAAFYGSASTREAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LTLGQVITYTWLAQGLLALLPWSGDPEVAQAVRTGAVAYDRLRPVNAYALWFARTAGWTA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH ARVLPRVTMMLTFAGVLLPIVGLGDWAWEPPAGLAAGMGFIASALLALLLSTSLVMLLNI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAAALNERGINTLAVPVVIVLSGNLLPLALLPDAWQAALLAQPLAGVMDIPARIYFGQL HHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHEECCC GGAQMFTALGLQCLWIMLLVATGHAAMGRTMRRLEVQGG CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MMAPRELARPYLAAFRSRFLQMLQYRLAAYAGFFTQCWWGGIKIMVLAAFYGSASTREAP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LTLGQVITYTWLAQGLLALLPWSGDPEVAQAVRTGAVAYDRLRPVNAYALWFARTAGWTA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH ARVLPRVTMMLTFAGVLLPIVGLGDWAWEPPAGLAAGMGFIASALLALLLSTSLVMLLNI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAAALNERGINTLAVPVVIVLSGNLLPLALLPDAWQAALLAQPLAGVMDIPARIYFGQL HHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHEECCC GGAQMFTALGLQCLWIMLLVATGHAAMGRTMRRLEVQGG CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA