| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540718
Identifier: 73540718
GI number: 73540718
Start: 1103516
End: 1104658
Strand: Direct
Name: 73540718
Synonym: Reut_A1015
Alternate gene names: NA
Gene position: 1103516-1104658 (Clockwise)
Preceding gene: 73540717
Following gene: 73540722
Centisome position: 28.99
GC content: 64.74
Gene sequence:
>1143_bases ATGACTTCAGGCCTGCATATTTCCACCAGTTTCGATTCGGGCGCGATCGAGGTCGATGCACTCGACCATGCCGACGATAT CCGCCTGCGTATCCGTGCTGATTCGCACGCGGACTTCCGCCAGTGGTTTCATTTCCGCCTGCAGGGCGCGGCGGGGCAGG CGTGCCGGCTGCAGTTCCTCAACGCGGGGGACTGCACGTATCCGGACGGCTGGCGAGACTATCGCGCGGTGGCCTCGTAC GATCGCGCGAACTGGTTCCGCGTGCCGACGCGCTTTGACGGGCAGGTGCTGACCGTTGAGTTCACGCCGCAACATGACAG CGTCTGGTTCGCATACTTCGAGCCCTATCCCGAAGAGCGCCACCTGTCGTTGCTGGCAACGTGCCAGCGCTCGCCGCTCG CAAAGCTTTCGCATCTGGGAAGTACAGTCGACGGCCGCGACATGACCCGAGTGACGGTGGGCCAGCCCGGTCCCGGCAAG AAGACCATCTGGATGATTGCGCGCCAGCATCCCGGCGAAAGCATGGCCGAATGGTTCTGCGAAGGCGTGCTCCAGCGCCT GACCGGCACCGGCATGTGGGCGCACGATCCGGTCGCGCGCAAGCTGCTGGAAAGCGCCGTGTTCCATATTGTGCCCAACA TGAACCCGGACGGCTCGGCCCGCGGCAACCTGCGCACCAACGCCGCGGGCGCCAACCTGAACCGCGAGTGGATGACGCCG AGCCCGGAAACGAGCCCGGAAGTCTGGCACGTGCGCCGCGCGATCGAGGCGACGGGCTGCGACCTGTTTTTCGACATCCA CGGCGACGAGGGCCTGCCCTACAACTTCGTCGCCGGGAGCGAGATGCTGCCGAGCTTTTCCGAGAAGCAGCGGGAGGAGC AGACACGCTTTATCGAGGCCTTCAAGCGCGTCACGCCGGACTTCCAGGACGTGCATGGCTATGCCGCGAGCAAGTACAAC GCCGACGCGCTCAAGCTCGCGTCGAAGTACGTCGGCCACACGTTTGGCTGCCTGTCTCTGACGCTGGAAATGCCGTTCAA GGACAACGCCGACCTGCCCGATGCCACGGTGGGCTGGAACGGCGCGCGCAGCGCGTTGCTGGGCACGGCGATGCTGGAGG CGATCCTGAATTTTCTCGGCTAA
Upstream 100 bases:
>100_bases CCGAAGACGGCTACGCCTTCGATGCCGCTGCTTCCAACGACGGCCGCTGGGTGTTCCGCCGCCGCCTCGAAGACTGAACC CTGCCACGGAGCTGCCCGAC
Downstream 100 bases:
>100_bases GCCCGACCGCAGTAAGCAACACAGGCCTGCCGGCAAGGCGGGCCTTTTTACATGGGACTGCCCCGACGCTTACTGCTTCT TCTTGCTCTTGCTCTTGCTC
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTSGLHISTSFDSGAIEVDALDHADDIRLRIRADSHADFRQWFHFRLQGAAGQACRLQFLNAGDCTYPDGWRDYRAVASY DRANWFRVPTRFDGQVLTVEFTPQHDSVWFAYFEPYPEERHLSLLATCQRSPLAKLSHLGSTVDGRDMTRVTVGQPGPGK KTIWMIARQHPGESMAEWFCEGVLQRLTGTGMWAHDPVARKLLESAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMTP SPETSPEVWHVRRAIEATGCDLFFDIHGDEGLPYNFVAGSEMLPSFSEKQREEQTRFIEAFKRVTPDFQDVHGYAASKYN ADALKLASKYVGHTFGCLSLTLEMPFKDNADLPDATVGWNGARSALLGTAMLEAILNFLG
Sequences:
>Translated_380_residues MTSGLHISTSFDSGAIEVDALDHADDIRLRIRADSHADFRQWFHFRLQGAAGQACRLQFLNAGDCTYPDGWRDYRAVASY DRANWFRVPTRFDGQVLTVEFTPQHDSVWFAYFEPYPEERHLSLLATCQRSPLAKLSHLGSTVDGRDMTRVTVGQPGPGK KTIWMIARQHPGESMAEWFCEGVLQRLTGTGMWAHDPVARKLLESAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMTP SPETSPEVWHVRRAIEATGCDLFFDIHGDEGLPYNFVAGSEMLPSFSEKQREEQTRFIEAFKRVTPDFQDVHGYAASKYN ADALKLASKYVGHTFGCLSLTLEMPFKDNADLPDATVGWNGARSALLGTAMLEAILNFLG >Mature_379_residues TSGLHISTSFDSGAIEVDALDHADDIRLRIRADSHADFRQWFHFRLQGAAGQACRLQFLNAGDCTYPDGWRDYRAVASYD RANWFRVPTRFDGQVLTVEFTPQHDSVWFAYFEPYPEERHLSLLATCQRSPLAKLSHLGSTVDGRDMTRVTVGQPGPGKK TIWMIARQHPGESMAEWFCEGVLQRLTGTGMWAHDPVARKLLESAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMTPS PETSPEVWHVRRAIEATGCDLFFDIHGDEGLPYNFVAGSEMLPSFSEKQREEQTRFIEAFKRVTPDFQDVHGYAASKYNA DALKLASKYVGHTFGCLSLTLEMPFKDNADLPDATVGWNGARSALLGTAMLEAILNFLG
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190194403, Length=410, Percent_Identity=26.5853658536585, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI31657119, Length=302, Percent_Identity=26.8211920529801, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI170763513, Length=296, Percent_Identity=26.6891891891892, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI120444924, Length=336, Percent_Identity=25.5952380952381, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI222352158, Length=312, Percent_Identity=26.2820512820513, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI78482633, Length=167, Percent_Identity=28.1437125748503, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI118421091, Length=167, Percent_Identity=28.1437125748503, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533904, Length=410, Percent_Identity=26.0975609756098, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI193202888, Length=200, Percent_Identity=29.5, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24641847, Length=322, Percent_Identity=27.9503105590062, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI28571179, Length=322, Percent_Identity=27.9503105590062, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI161077807, Length=322, Percent_Identity=27.9503105590062, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24641845, Length=322, Percent_Identity=27.9503105590062, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42505; Mature: 42374
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGLHISTSFDSGAIEVDALDHADDIRLRIRADSHADFRQWFHFRLQGAAGQACRLQFL CCCCEEEEECCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHEECCCCCCEEEEEEE NAGDCTYPDGWRDYRAVASYDRANWFRVPTRFDGQVLTVEFTPQHDSVWFAYFEPYPEER CCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCHH HLSLLATCQRSPLAKLSHLGSTVDGRDMTRVTVGQPGPGKKTIWMIARQHPGESMAEWFC HHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHH EGVLQRLTGTGMWAHDPVARKLLESAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMTP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC SPETSPEVWHVRRAIEATGCDLFFDIHGDEGLPYNFVAGSEMLPSFSEKQREEQTRFIEA CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHH FKRVTPDFQDVHGYAASKYNADALKLASKYVGHTFGCLSLTLEMPFKDNADLPDATVGWN HHHHCCCHHHHCCCHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCC GARSALLGTAMLEAILNFLG CHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TSGLHISTSFDSGAIEVDALDHADDIRLRIRADSHADFRQWFHFRLQGAAGQACRLQFL CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHEECCCCCCEEEEEEE NAGDCTYPDGWRDYRAVASYDRANWFRVPTRFDGQVLTVEFTPQHDSVWFAYFEPYPEER CCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCHH HLSLLATCQRSPLAKLSHLGSTVDGRDMTRVTVGQPGPGKKTIWMIARQHPGESMAEWFC HHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHH EGVLQRLTGTGMWAHDPVARKLLESAVFHIVPNMNPDGSARGNLRTNAAGANLNREWMTP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC SPETSPEVWHVRRAIEATGCDLFFDIHGDEGLPYNFVAGSEMLPSFSEKQREEQTRFIEA CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHH FKRVTPDFQDVHGYAASKYNADALKLASKYVGHTFGCLSLTLEMPFKDNADLPDATVGWN HHHHCCCHHHHCCCHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCC GARSALLGTAMLEAILNFLG CHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]