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The map label for this gene is psd

Identifier: 73540653

GI number: 73540653

Start: 1037283

End: 1037936

Strand: Direct

Name: psd

Synonym: Reut_A0950

Alternate gene names: 73540653

Gene position: 1037283-1037936 (Clockwise)

Preceding gene: 73540652

Following gene: 73540654

Centisome position: 27.25

GC content: 61.62

Gene sequence:

>654_bases
ATGAACTATCCTCATCCGCTGATCGCCCGTGAAGGCTGGCCGTTTCTGGCTGGCGCCTTTCTTATCTCGCTGCTGGTACA
CGCCAGTGCGGGCTTCTGGTGGGCATTGCCGCTGTGGATCATCACGTTGTTCGTGCTCCAGTTTTTCCGCGATCCGCCGC
GGCCGATTCCTGCACAGCCGAATGCCGTACTGGCCCCTGCCGACGGACGGATCGTTGTCGTCGAGAAGGTGCAGGATCCC
TATGCCGGCCGTGAAGCGCTGAAGATCAGCGTGTTCATGAACGTGTTCAATGTGCATTCGAACCGCGCCTCGGTCGATGG
CAAGGTCGAGAAGCTCGAATATTTTCCGGGCAAGTTCGTCAACGCTGACCTGGACAAGGCATCGGTGGAAAACGAACGCA
ATGCGGTGGTGATCCGCCGCGCCGCAGACGGGCAAATCGTGACGCTGGTGCAGGTGGCCGGCCTGGTGGCTCGCCGCATC
CTGTGCTACACGAAGGTTGGCGACAGCCTGTCGCGCGGCCAGCGCTATGGCTTCATCCGCTTCGGTTCGCGCGTGGACGT
CTACCTGCCCGTGAGCGCGCGCCCGCGCGTCACCATCGGCGAAAAGGTGTCGGCATCGTCGACGATCCTTGCCGAGCTGG
ACGAAGTCAAGTAA

Upstream 100 bases:

>100_bases
GCCTTATCCTGCTCTGCGTCGGCGCCATTCCCCCGGCAGTGGCCGCATCTGCATCTGAGTGCACGATGGTGCCTTTTCCT
CTCAACGAACCAAGCACTGC

Downstream 100 bases:

>100_bases
GCGACAACCAGACAGGAGCGCTGTAATGGTTGCCTTTCACCGCCGCAACAAGCGGGCCAACAGCGGAAACGTGACGCATC
TGCGTCCGTTCCGTCATAAC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNYPHPLIAREGWPFLAGAFLISLLVHASAGFWWALPLWIITLFVLQFFRDPPRPIPAQPNAVLAPADGRIVVVEKVQDP
YAGREALKISVFMNVFNVHSNRASVDGKVEKLEYFPGKFVNADLDKASVENERNAVVIRRAADGQIVTLVQVAGLVARRI
LCYTKVGDSLSRGQRYGFIRFGSRVDVYLPVSARPRVTIGEKVSASSTILAELDEVK

Sequences:

>Translated_217_residues
MNYPHPLIAREGWPFLAGAFLISLLVHASAGFWWALPLWIITLFVLQFFRDPPRPIPAQPNAVLAPADGRIVVVEKVQDP
YAGREALKISVFMNVFNVHSNRASVDGKVEKLEYFPGKFVNADLDKASVENERNAVVIRRAADGQIVTLVQVAGLVARRI
LCYTKVGDSLSRGQRYGFIRFGSRVDVYLPVSARPRVTIGEKVSASSTILAELDEVK
>Mature_217_residues
MNYPHPLIAREGWPFLAGAFLISLLVHASAGFWWALPLWIITLFVLQFFRDPPRPIPAQPNAVLAPADGRIVVVEKVQDP
YAGREALKISVFMNVFNVHSNRASVDGKVEKLEYFPGKFVNADLDKASVENERNAVVIRRAADGQIVTLVQVAGLVARRI
LCYTKVGDSLSRGQRYGFIRFGSRVDVYLPVSARPRVTIGEKVSASSTILAELDEVK

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_CUPPJ (Q473V4)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_295173.1
- GeneID:   3609747
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A0950
- NMPDR:   fig|264198.3.peg.1350
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   REUT264198:REUT_A0950-MONOMER
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 24059; Mature: 24059

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYPHPLIAREGWPFLAGAFLISLLVHASAGFWWALPLWIITLFVLQFFRDPPRPIPAQP
CCCCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NAVLAPADGRIVVVEKVQDPYAGREALKISVFMNVFNVHSNRASVDGKVEKLEYFPGKFV
CEEEECCCCCEEEEEECCCCCCCHHHEEHEEEEEHHHHCCCCCCCCCCHHHHCCCCCCCC
NADLDKASVENERNAVVIRRAADGQIVTLVQVAGLVARRILCYTKVGDSLSRGQRYGFIR
CCCCCHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEEE
FGSRVDVYLPVSARPRVTIGEKVSASSTILAELDEVK
ECCEEEEEEECCCCCCEEECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNYPHPLIAREGWPFLAGAFLISLLVHASAGFWWALPLWIITLFVLQFFRDPPRPIPAQP
CCCCCCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NAVLAPADGRIVVVEKVQDPYAGREALKISVFMNVFNVHSNRASVDGKVEKLEYFPGKFV
CEEEECCCCCEEEEEECCCCCCCHHHEEHEEEEEHHHHCCCCCCCCCCHHHHCCCCCCCC
NADLDKASVENERNAVVIRRAADGQIVTLVQVAGLVARRILCYTKVGDSLSRGQRYGFIR
CCCCCHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEEE
FGSRVDVYLPVSARPRVTIGEKVSASSTILAELDEVK
ECCEEEEEEECCCCCCEEECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA