| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is hutC [H]
Identifier: 73540598
GI number: 73540598
Start: 976430
End: 977185
Strand: Direct
Name: hutC [H]
Synonym: Reut_A0895
Alternate gene names: 73540598
Gene position: 976430-977185 (Clockwise)
Preceding gene: 73540597
Following gene: 73540599
Centisome position: 25.65
GC content: 66.53
Gene sequence:
>756_bases TTGTCTCAAGCCACCGCACAGCCGGGCCAGCCCACCGCCGGGCTGTCCGACACGTTGCCAGCACCGCTCTATGCGCGCGT CAAGCAGTTCATCAGCAGCAAGATTGCCGATGGCAGCTGGCCGCCGCATCACCGCGTGCCGTCCGAAACCGAGCTTGTCG AAGAACTCGGCGTGAGCCGCATGACGGTCAACCGCGCGCTGCGCGAGCTGACTGCCGACGGCATGCTGGTGCGCATGCAA GGCGTGGGCACTTTCGTCGCGGAGCCCAAGCGCAACTCCGCGCTGTATGCGGTCAATAACATCGCCGAGGAAATCGCGGC GCGCGGCCGCCGCCACCATGCCAGGGTGGTCAAGAGCAGCGAGGAGGTCGCGGGCGCCGCGCGTGCGGCCGCGCTAGACG TGGGCGAGAGCCAGCGCGTGTTCCACACGGTGATCGTGCACTACGAGGACGATGTGCCGATCCAGCTAGAGGACCGTTAC GTCAACCCGACTGTCGCGGCCGATTACCTCGAGCAGGACTTCACGCGCCAGACGCCTTACGAATACCTGTCACGCGTGGC ACCGCTGACGGAGGGCGAGCACGTGGTCGAAGCCGTTCTGGCCACGCCCGACGAATGCGCGCTGCTGCAGATCGATCGCG GTGAGCCATGCCTGCTGATCCGCCGGCGCACATGGTCGGGCAACCGCGTCGTGACGTCAGTGCGCCTGCTGCATCCAGGG TCGATGCATCGGCTGGAAGGGCGCTTCACTTCCTGA
Upstream 100 bases:
>100_bases CGCGTGGTACATTCGCCGATGATGTAAACACCGCCCTATACAAGTCCAGCGGGCGCCGCGGCAGGATTGCCGGCGGCGCC AGCCTCAACGGGAAACAGTT
Downstream 100 bases:
>100_bases CCCCGCGTTACTAGTCGACAGTCGCGCCCGGCCAAGTCCGGGCGCAGTCACTTCCAGGCATAGATCTCTGCTAGTCCTCG GGAATACCCCAATACATCTA
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSQATAQPGQPTAGLSDTLPAPLYARVKQFISSKIADGSWPPHHRVPSETELVEELGVSRMTVNRALRELTADGMLVRMQ GVGTFVAEPKRNSALYAVNNIAEEIAARGRRHHARVVKSSEEVAGAARAAALDVGESQRVFHTVIVHYEDDVPIQLEDRY VNPTVAADYLEQDFTRQTPYEYLSRVAPLTEGEHVVEAVLATPDECALLQIDRGEPCLLIRRRTWSGNRVVTSVRLLHPG SMHRLEGRFTS
Sequences:
>Translated_251_residues MSQATAQPGQPTAGLSDTLPAPLYARVKQFISSKIADGSWPPHHRVPSETELVEELGVSRMTVNRALRELTADGMLVRMQ GVGTFVAEPKRNSALYAVNNIAEEIAARGRRHHARVVKSSEEVAGAARAAALDVGESQRVFHTVIVHYEDDVPIQLEDRY VNPTVAADYLEQDFTRQTPYEYLSRVAPLTEGEHVVEAVLATPDECALLQIDRGEPCLLIRRRTWSGNRVVTSVRLLHPG SMHRLEGRFTS >Mature_250_residues SQATAQPGQPTAGLSDTLPAPLYARVKQFISSKIADGSWPPHHRVPSETELVEELGVSRMTVNRALRELTADGMLVRMQG VGTFVAEPKRNSALYAVNNIAEEIAARGRRHHARVVKSSEEVAGAARAAALDVGESQRVFHTVIVHYEDDVPIQLEDRYV NPTVAADYLEQDFTRQTPYEYLSRVAPLTEGEHVVEAVLATPDECALLQIDRGEPCLLIRRRTWSGNRVVTSVRLLHPGS MHRLEGRFTS
Specific function: Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer [H]
COG id: COG2188
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082252, Length=211, Percent_Identity=29.3838862559242, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786950, Length=199, Percent_Identity=27.6381909547739, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010248 - InterPro: IPR000524 - InterPro: IPR011663 - InterPro: IPR011991 [H]
Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]
EC number: NA
Molecular weight: Translated: 27785; Mature: 27654
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQATAQPGQPTAGLSDTLPAPLYARVKQFISSKIADGSWPPHHRVPSETELVEELGVSR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH MTVNRALRELTADGMLVRMQGVGTFVAEPKRNSALYAVNNIAEEIAARGRRHHARVVKSS HHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCC EEVAGAARAAALDVGESQRVFHTVIVHYEDDVPIQLEDRYVNPTVAADYLEQDFTRQTPY HHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCHH EYLSRVAPLTEGEHVVEAVLATPDECALLQIDRGEPCLLIRRRTWSGNRVVTSVRLLHPG HHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCC SMHRLEGRFTS CCHHCCCCCCC >Mature Secondary Structure SQATAQPGQPTAGLSDTLPAPLYARVKQFISSKIADGSWPPHHRVPSETELVEELGVSR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHH MTVNRALRELTADGMLVRMQGVGTFVAEPKRNSALYAVNNIAEEIAARGRRHHARVVKSS HHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCC EEVAGAARAAALDVGESQRVFHTVIVHYEDDVPIQLEDRYVNPTVAADYLEQDFTRQTPY HHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCHH EYLSRVAPLTEGEHVVEAVLATPDECALLQIDRGEPCLLIRRRTWSGNRVVTSVRLLHPG HHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEEEECCC SMHRLEGRFTS CCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]