| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540596
Identifier: 73540596
GI number: 73540596
Start: 974750
End: 975520
Strand: Reverse
Name: 73540596
Synonym: Reut_A0893
Alternate gene names: NA
Gene position: 975520-974750 (Counterclockwise)
Preceding gene: 73540601
Following gene: 73540595
Centisome position: 25.63
GC content: 66.8
Gene sequence:
>771_bases ATGGCGCAAGTACAACTCGTCGATTCCGTCAGGACCCGCGTTTCCGAGGCGGAATGGCAGATGCGCGTCGACCTGGCGGC GGCCTATCGCCTGGTCGCGCATTTCGGCTGGGACGACTTGATCTTCACGCACATCTCGGCACGCGTGCCCGGCGCGCCGG ACCAGTTCCTGATCAATCCGTACGGCATGCTGTTCGACGAGATCACGGCGTCGAGCCTGGTCAAGGTCGACCATCACGGC GAGCCCGTGCTCGACACGCCGTACGACGTGAACCCGGCCGGCTTCATCATTCACAGCGCCGTGCATGAAGCCCGCCCGGA AATCGCTTGCGTCATGCATACGCACACGCCGTACGGCGTGGCGGTGTCGGCCCAACAGGCCGGCCTGCTGCCGCTCTCGC AACAGGCCATGTTCGCGCGCATGGGCCTGGCCTATCACGACTACGAAGGCGTGGCGCTGCGCGAGGACGAGAAGGCTCGC CTGGTCGCCGACCTCGGCCGCAGCAAGCAAATGATCCTGCGCAACCATGGCCTGCTGACCTGCGGCCGCGCGGTGTCCGA CGCGTTCCTGACGATGTACACGCTGGAGTCGGCCTGCCGCATCCAGATCCTCGCGCAGAGCGGTGGCTCGGCGCTGACCA CGGTGCCGGAATCCGCCAGCGCCGACGTCGGCGAACAAGCGCGCCAGGCGACCAAGGGCAAGGGCTCGGGCCTCGCATGG CCGGCGCTGCTGCGTCGCCTGGATCGTATTCAACCCGACTTCCGGAACTGA
Upstream 100 bases:
>100_bases CCAAAGCGAGATTGTCCAATACTTAACAGACTTGCGCAGGCACGCGGGCGCAGAATGCCACCGCACTCACGATACAGAAC ACACCCCCGGAGGCATTCAC
Downstream 100 bases:
>100_bases CATGGGCATCCTCGTACATCTGCCATCGTTCATGGCCGGCGCCATTGGCGCCGCACTGCGCGAAGCCGCGCCCGACATCC CGGTCTGGATCGGCCGCGAG
Product: aldolase II superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAQVQLVDSVRTRVSEAEWQMRVDLAAAYRLVAHFGWDDLIFTHISARVPGAPDQFLINPYGMLFDEITASSLVKVDHHG EPVLDTPYDVNPAGFIIHSAVHEARPEIACVMHTHTPYGVAVSAQQAGLLPLSQQAMFARMGLAYHDYEGVALREDEKAR LVADLGRSKQMILRNHGLLTCGRAVSDAFLTMYTLESACRIQILAQSGGSALTTVPESASADVGEQARQATKGKGSGLAW PALLRRLDRIQPDFRN
Sequences:
>Translated_256_residues MAQVQLVDSVRTRVSEAEWQMRVDLAAAYRLVAHFGWDDLIFTHISARVPGAPDQFLINPYGMLFDEITASSLVKVDHHG EPVLDTPYDVNPAGFIIHSAVHEARPEIACVMHTHTPYGVAVSAQQAGLLPLSQQAMFARMGLAYHDYEGVALREDEKAR LVADLGRSKQMILRNHGLLTCGRAVSDAFLTMYTLESACRIQILAQSGGSALTTVPESASADVGEQARQATKGKGSGLAW PALLRRLDRIQPDFRN >Mature_255_residues AQVQLVDSVRTRVSEAEWQMRVDLAAAYRLVAHFGWDDLIFTHISARVPGAPDQFLINPYGMLFDEITASSLVKVDHHGE PVLDTPYDVNPAGFIIHSAVHEARPEIACVMHTHTPYGVAVSAQQAGLLPLSQQAMFARMGLAYHDYEGVALREDEKARL VADLGRSKQMILRNHGLLTCGRAVSDAFLTMYTLESACRIQILAQSGGSALTTVPESASADVGEQARQATKGKGSGLAWP ALLRRLDRIQPDFRN
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family [H]
Homologues:
Organism=Homo sapiens, GI29826323, Length=251, Percent_Identity=43.0278884462151, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI29826325, Length=251, Percent_Identity=43.0278884462151, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI29826321, Length=251, Percent_Identity=43.0278884462151, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI29826319, Length=251, Percent_Identity=43.0278884462151, Blast_Score=188, Evalue=3e-48, Organism=Homo sapiens, GI297307158, Length=201, Percent_Identity=39.3034825870647, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI9257192, Length=201, Percent_Identity=39.3034825870647, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI9257190, Length=201, Percent_Identity=39.3034825870647, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI297307160, Length=201, Percent_Identity=39.3034825870647, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI89276787, Length=201, Percent_Identity=39.3034825870647, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI9943848, Length=205, Percent_Identity=38.5365853658537, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI9951927, Length=205, Percent_Identity=38.5365853658537, Blast_Score=141, Evalue=5e-34, Organism=Homo sapiens, GI62912453, Length=205, Percent_Identity=38.5365853658537, Blast_Score=141, Evalue=5e-34, Organism=Caenorhabditis elegans, GI115533216, Length=249, Percent_Identity=43.3734939759036, Blast_Score=190, Evalue=6e-49, Organism=Caenorhabditis elegans, GI115533218, Length=249, Percent_Identity=43.3734939759036, Blast_Score=189, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71989541, Length=249, Percent_Identity=32.5301204819277, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71989560, Length=249, Percent_Identity=32.5301204819277, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71989550, Length=249, Percent_Identity=32.5301204819277, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71989544, Length=249, Percent_Identity=32.5301204819277, Blast_Score=135, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71989555, Length=249, Percent_Identity=32.5301204819277, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI281363755, Length=220, Percent_Identity=38.1818181818182, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI281363751, Length=220, Percent_Identity=38.1818181818182, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI24655690, Length=220, Percent_Identity=38.1818181818182, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI24655685, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=6e-34, Organism=Drosophila melanogaster, GI281363761, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=9e-34, Organism=Drosophila melanogaster, GI281363759, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=9e-34, Organism=Drosophila melanogaster, GI281363753, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=9e-34, Organism=Drosophila melanogaster, GI281363763, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI281363757, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI17136738, Length=220, Percent_Identity=38.1818181818182, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 28034; Mature: 27903
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVQLVDSVRTRVSEAEWQMRVDLAAAYRLVAHFGWDDLIFTHISARVPGAPDQFLINP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECH YGMLFDEITASSLVKVDHHGEPVLDTPYDVNPAGFIIHSAVHEARPEIACVMHTHTPYGV HHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCE AVSAQQAGLLPLSQQAMFARMGLAYHDYEGVALREDEKARLVADLGRSKQMILRNHGLLT EEECCCCCCCCCHHHHHHHHHCCEEECCCCEEECCCCHHHHHHHCCCCHHHHHHCCCCEE CGRAVSDAFLTMYTLESACRIQILAQSGGSALTTVPESASADVGEQARQATKGKGSGLAW ECHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCH PALLRRLDRIQPDFRN HHHHHHHHHCCCCCCC >Mature Secondary Structure AQVQLVDSVRTRVSEAEWQMRVDLAAAYRLVAHFGWDDLIFTHISARVPGAPDQFLINP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECH YGMLFDEITASSLVKVDHHGEPVLDTPYDVNPAGFIIHSAVHEARPEIACVMHTHTPYGV HHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCE AVSAQQAGLLPLSQQAMFARMGLAYHDYEGVALREDEKARLVADLGRSKQMILRNHGLLT EEECCCCCCCCCHHHHHHHHHCCEEECCCCEEECCCCHHHHHHHCCCCHHHHHHCCCCEE CGRAVSDAFLTMYTLESACRIQILAQSGGSALTTVPESASADVGEQARQATKGKGSGLAW ECHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCH PALLRRLDRIQPDFRN HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]