| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is bugT [H]
Identifier: 73540254
GI number: 73540254
Start: 595725
End: 596729
Strand: Direct
Name: bugT [H]
Synonym: Reut_A0548
Alternate gene names: 73540254
Gene position: 595725-596729 (Clockwise)
Preceding gene: 73540253
Following gene: 73540266
Centisome position: 15.65
GC content: 64.08
Gene sequence:
>1005_bases ATGTCCCGCCTGCCCCTGCGTTTGTCCTTCCGCTCCGCACTCAAACTGACCGCTGGCCTCGCCGCGGCCTGCGCCATTGC CGCGCCCGCGCTTGCACAAGGCGAATGGCCGACGCAGCCAGTGACCATCCTGATGGGTTTCACCGCGGGCTCCGGTGTGG ACATGGTGGGCCGCACGCTTCAGGAATCGCTGCAGAAGTCGCTCAAGACGACCATCATCTACGACTACCGTCCGGGCGCG GGCGGCAACGTGGCCTCGGAAGTCGTGGCCCACGCCAAGCCGGACGGCTACACACTGCTGCTCGGCACGGCCGCCACGCA CGGCATCAACCCGGCGCTGTACAAGACCCTGCCGTTCGATGCCGACGCCGATTTCACGCCGATCGCGCCGCTGGTCGAAG TCTCGAACGTGCTGACCATCAACCCGGCCGTGATCGATGTGAAGTCGGTCAAAGAGTTCATCGAGAAGATCAAGGCCAAT CCGGGCAAATACAACTACGCGTCCACGGGCAACGGCACGGGCACGCACCTGGCGTTCGCCGAGTTCAATGCGCGCGCGGG TCTCGACATGGTCCACGTGCCGTACAAGGGCGGTCCCGACGCGTTGCAGGCCGTGCTCAAGGGCGAGGTCTGCTGCATCT TTAACCAGGTCCAGAGCGTGCTGCCGCAATATCGAGCGGGCAAGGTGCGCTTGCTTGGCGTGAGCACGAACAAGCGCGTG CCGGTCATTCCTGAAGTGCCGGCCATTTCCGAAAGCGGCCTGCCCGGCTTCAACAGCACGATCTGGTTCGGCTTCTTCGG GCCCAAGGGCCTGGACCCGAAGATCGCACGCAAGATCAATGACGCGGTGAAGGTTGCGCTGGAAAACCCGGCGATTCGCC AGAAGCTGATCGATGCGGGCAACACGCCGCGCGTGGAGACCGTCGATCAGTTCAAGGCTACGGTGAAGGCGGACCGCCAG AAGTGGGCGGGTGTGGTGAAGACGGTTGGGGCGTCGATCGATTGA
Upstream 100 bases:
>100_bases TGTGGTCTTGGCCCAGGGCGCCAAGACCCTGGCCCGTGATGGCGTCGTCCCCGCAATGGTAATGGCGCCGTTGTCCTTCA CTTTCCACGACGGTGCCCCT
Downstream 100 bases:
>100_bases TCGGGGTTTGAAGGAGACGCGCCCGCGAAGGTGCGGGCGCGTCGGGCGCTGGGTGCGCGGCTAAGACAAAAAGAGGTAGA TCTGCTTCCACAGCTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSRLPLRLSFRSALKLTAGLAAACAIAAPALAQGEWPTQPVTILMGFTAGSGVDMVGRTLQESLQKSLKTTIIYDYRPGA GGNVASEVVAHAKPDGYTLLLGTAATHGINPALYKTLPFDADADFTPIAPLVEVSNVLTINPAVIDVKSVKEFIEKIKAN PGKYNYASTGNGTGTHLAFAEFNARAGLDMVHVPYKGGPDALQAVLKGEVCCIFNQVQSVLPQYRAGKVRLLGVSTNKRV PVIPEVPAISESGLPGFNSTIWFGFFGPKGLDPKIARKINDAVKVALENPAIRQKLIDAGNTPRVETVDQFKATVKADRQ KWAGVVKTVGASID
Sequences:
>Translated_334_residues MSRLPLRLSFRSALKLTAGLAAACAIAAPALAQGEWPTQPVTILMGFTAGSGVDMVGRTLQESLQKSLKTTIIYDYRPGA GGNVASEVVAHAKPDGYTLLLGTAATHGINPALYKTLPFDADADFTPIAPLVEVSNVLTINPAVIDVKSVKEFIEKIKAN PGKYNYASTGNGTGTHLAFAEFNARAGLDMVHVPYKGGPDALQAVLKGEVCCIFNQVQSVLPQYRAGKVRLLGVSTNKRV PVIPEVPAISESGLPGFNSTIWFGFFGPKGLDPKIARKINDAVKVALENPAIRQKLIDAGNTPRVETVDQFKATVKADRQ KWAGVVKTVGASID >Mature_333_residues SRLPLRLSFRSALKLTAGLAAACAIAAPALAQGEWPTQPVTILMGFTAGSGVDMVGRTLQESLQKSLKTTIIYDYRPGAG GNVASEVVAHAKPDGYTLLLGTAATHGINPALYKTLPFDADADFTPIAPLVEVSNVLTINPAVIDVKSVKEFIEKIKANP GKYNYASTGNGTGTHLAFAEFNARAGLDMVHVPYKGGPDALQAVLKGEVCCIFNQVQSVLPQYRAGKVRLLGVSTNKRVP VIPEVPAISESGLPGFNSTIWFGFFGPKGLDPKIARKINDAVKVALENPAIRQKLIDAGNTPRVETVDQFKATVKADRQK WAGVVKTVGASID
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35421; Mature: 35290
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPLRLSFRSALKLTAGLAAACAIAAPALAQGEWPTQPVTILMGFTAGSGVDMVGRTL CCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH QESLQKSLKTTIIYDYRPGAGGNVASEVVAHAKPDGYTLLLGTAATHGINPALYKTLPFD HHHHHHHHCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHEECCCC ADADFTPIAPLVEVSNVLTINPAVIDVKSVKEFIEKIKANPGKYNYASTGNGTGTHLAFA CCCCCCCCHHHHHHCCEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE EFNARAGLDMVHVPYKGGPDALQAVLKGEVCCIFNQVQSVLPQYRAGKVRLLGVSTNKRV ECCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PVIPEVPAISESGLPGFNSTIWFGFFGPKGLDPKIARKINDAVKVALENPAIRQKLIDAG CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHEEEECCHHHHHHHHCCC NTPRVETVDQFKATVKADRQKWAGVVKTVGASID CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRLPLRLSFRSALKLTAGLAAACAIAAPALAQGEWPTQPVTILMGFTAGSGVDMVGRTL CCCCEEEHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH QESLQKSLKTTIIYDYRPGAGGNVASEVVAHAKPDGYTLLLGTAATHGINPALYKTLPFD HHHHHHHHCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHEECCCC ADADFTPIAPLVEVSNVLTINPAVIDVKSVKEFIEKIKANPGKYNYASTGNGTGTHLAFA CCCCCCCCHHHHHHCCEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE EFNARAGLDMVHVPYKGGPDALQAVLKGEVCCIFNQVQSVLPQYRAGKVRLLGVSTNKRV ECCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PVIPEVPAISESGLPGFNSTIWFGFFGPKGLDPKIARKINDAVKVALENPAIRQKLIDAG CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHEEEECCHHHHHHHHCCC NTPRVETVDQFKATVKADRQKWAGVVKTVGASID CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]