| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is ywqA [H]
Identifier: 73540253
GI number: 73540253
Start: 592564
End: 595530
Strand: Direct
Name: ywqA [H]
Synonym: Reut_A0547
Alternate gene names: 73540253
Gene position: 592564-595530 (Clockwise)
Preceding gene: 73540247
Following gene: 73540254
Centisome position: 15.57
GC content: 70.0
Gene sequence:
>2967_bases GTGCAATCCGACACCCTTCCTGGCACCGATGCCGCCCCCGACAGCAGCCTTCCCGCCTGGCAACAGGCACTGGAAGCCCT GCAGGGGCTGGCGGCGGGTACTGAGGGCGTGGGCATTGCAACGGATCGCCGCCTGCTGTGGGCACTGACCCTGGACGCCG ACGGTGCCGTCGGCGCCATCGAGCCGCTGGAGCAGGTCCGCGGCGCGCGCGGCTGGGGCAAGCCGCGCCCGGTGCCCTTG GCGCGCGTGGCGGAGGACGGGCAACTGCCAGCATGGGATACACGCGTGGCGCATGCCATCCGGCGCGACCAGTCGCACAA CCGGCGCTATGTGCTCGATCGCGCAGCCGCCATCGCGGCGCTGGTGGGCCACCCCGCGGTCGTGCTGGCCCGTTCGCCGG AACAGGTGCTGGAAGTGACCGAAGGCACGCCAGCGCTCGAAGCCGTGCATACCGACGGCCGTTACCTGCTGCGGATCTAC CCGCCGCTGCGCGAAGCGCCCGCGATGGAAGCCTACCTGCCGGCGGCGGCACGCCAGGATGCCGAGGCGCTACGCCATAT CACGGTGCTGCGTGATGGCCCGCAGCGGTTGCGCGTCATCCGCTTTACGCCGGCGCAACTAGGCGCCGCGCAGCTCGTTG CCGATGGCCTTTCGATTCCCGAAGCCGGCCGCGCGCAACTTGACCGCACGCTGCGCGCGCTGGCGGGTCACTTCCAGGTC GAGGCCGACCCGACCGGCGCCGTGCGCGAACTGGAGCCCGAAGCGCGGCTGCGCGCCGAGGTGGCGCCGCATGGACGCGG CATCGCGCTGCGGCTCGTGGTCACGCCACTCGGACCGCTCGGTCCACGTCTGGCGCCCGGCGCGGGCCGCGAGCGGCTGA TGGCCACGGTGCGCGGCGAAACGCTCGCGACGCAGCGCGATCTCGATGCCGAACTGGCGAACGTGGCCGAGGTATTTGCC GAACTGCCGTTTCTCGTCCCGCTGGCTCCGCCCGATGGCGAGCATAGCTGGGTGCTTGACGATCCCGAGGACGCATTGGC CGTGGTCGAAGCGCTGCCGCGCCTGGCCGGCGTGCAGGCGCTCGAGTGGCCGCGCGGCAAGGAGATGCGCGTGGTCGCCG CCGACCTGCCGCAACTCAGCGTGACGGTCGAAACGCGCAACACGTGGTACCGGCTGGTTGGCGAGCTGCGTGTGGCCGAA GGGCTCGTGCTGGAACTTGGCAAGCTGATCGACTGGACCGGCAGCCACGCGGGCCGTTTCGTGCCGATGGGGCAGGGCGT GTACATTGCGCTCACGCGCACGCTGCGGGGCCGCCTGCGCGATCTGGCCAGTGTTGCCGACCAGGTCCCCGATGGTATCC GCGTCCCGTTGATGGCTACGCCATGGCTCGACGATGTGCTGGCCGGCGCGGGGGTCGATCCTGATGCGCATTTCCGCCAG CGGCTGGCACGATTGCGGACCGCGCGAGAGACCGATATCACGCTCCCGCCGAATCTGGCCGCCGAGCTGCGACCCTACCA GTACGACGGCTACCGCTGGGCGATGACGCTGGCCTCCGCAGGCCTCGGCGCTTGTCTTGCCGACGACATGGGCCTCGGCA AGACGCTGCAGGCACTGGCGGTGCTGCTGGCGCGCGCGGGCGGCGGCGCGGGCCTGGTGATCGCGCCGACTTCGGTCTGC GGCAACTGGGCCGCCGAAGCGCGACGCTTCGCGCCGACGCTCAATGTGCACGTCTATGCCGAAGGCGAGCGCGAAGCCCT GCTGACCCAGGTGGGTGCAGGCGATCTCGTCATCGTCTCGTACACGCTGCTGCAGCAGGCGCGCCAGGCATTCTGCGCGC GCGAGTGGCACACGGTAGTGGCCGACGAAGCGCAGGCGATCAAGAACGCCGCATCGCGCCGTGCGCAGGCATTGTTCGAT CTGCCATCGGGATTCCGCATGGTGCTTTCGGGCACGCCCATCGAAAACCGGCTGGCCGAACTCTGGTCGGTCATGCGTTT CTGCAACCCGGGCTTGCTCGGCTCGCTGGCCCGCTTCAACGAGCATTTCGCGAACCCCATCGAGCGCAGTGGCGCACGAG AAGTCCGTCAGCGGCTGCGGCGCATGATCGCGCCCTTCGTGCTGCGCCGGACCAAGGCGCAGGTGCTCGACGAACTGCCG CCGCGCACCGAACTTGTCATCCGCGTCGAGCCGGCACCGGTCGAGGCCGCGCACTACGAGGCATTGCGACGGCAGGCGCA GTCCCAGGCCGAAGCTGCGCTCGCACGCGTCGAAGCTGCGCGCAAGGCTACGCGCGGCGCTCCCGAGGGCGCGCGCGCGA GGGCAGTGGCACAGGCCCAGTTTCAGGCGGAGGCCCGCATCCACGTGCTCGCGCAACTGATGCGGCTGCGTCGCGCGGCC TGCGATGCGCGGCTCGTGACGCCGGAGGTGGGTCAGGCAGGCGCCAAGGTGCGGACCTTTGTCGACCTTGCCGGCGAACT CGCGGCCAATGGCCACAAGGTGCTGGTGTTCAGCCAGTTCGTGGATTTCCTGCAATTGCTCAGGCAGGGCATCGAACAAG CGGGACTCGCGCTGCAGTACCTGGACGGCGCCACGCCAGCTGCCGAACGCACACGGCGCGTGGCCGCGTTCCAGGCGGGC GAGGGCGATGTCTTCCTGATCAGCCTGAAGGCCGGTGGTTTCGGCCTGAACCTGACGGCGGCCGACTACGTGATCATCGC CGATCCGTGGTGGAATCCGGCCGCGGAAGACCAGGCCATGGGCCGCGCCCATCGTATCGGCCAGCAGCGTCCCGTTACCG TGTACCGGCTCATCACCGCGGGGACCATCGAGGAGCGTATCGTCGAACTGCACAAGGACAAGCGCGCGCTGGCCGACGGC TTGCTCGATGCCGATGACGAAGCCGCGTCGGGCATCGGCGCACCGCTGCCCGACGTGGATGAACTGGTCGGGCTGCTGCG GCGCTGA
Upstream 100 bases:
>100_bases GCGGGGCCATGGGTGCCAACGCGGCAAGCCGCGAAAGGCGGTCTAAAATGCCCGCTTTCGCGTCGTTCTTCCCCAATTTC CTGATTCCGGACCTGTTTCT
Downstream 100 bases:
>100_bases GCGTTGCCGCGATACGACTGATCACACCATATGCCGGCGCGGCATACCTTCAAGTGAACTCGGTCGTTTGGTTTTGCCGC GAACATTGCTATCGTGTGGT
Product: SNF2-related:helicase, C-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 988; Mature: 988
Protein sequence:
>988_residues MQSDTLPGTDAAPDSSLPAWQQALEALQGLAAGTEGVGIATDRRLLWALTLDADGAVGAIEPLEQVRGARGWGKPRPVPL ARVAEDGQLPAWDTRVAHAIRRDQSHNRRYVLDRAAAIAALVGHPAVVLARSPEQVLEVTEGTPALEAVHTDGRYLLRIY PPLREAPAMEAYLPAAARQDAEALRHITVLRDGPQRLRVIRFTPAQLGAAQLVADGLSIPEAGRAQLDRTLRALAGHFQV EADPTGAVRELEPEARLRAEVAPHGRGIALRLVVTPLGPLGPRLAPGAGRERLMATVRGETLATQRDLDAELANVAEVFA ELPFLVPLAPPDGEHSWVLDDPEDALAVVEALPRLAGVQALEWPRGKEMRVVAADLPQLSVTVETRNTWYRLVGELRVAE GLVLELGKLIDWTGSHAGRFVPMGQGVYIALTRTLRGRLRDLASVADQVPDGIRVPLMATPWLDDVLAGAGVDPDAHFRQ RLARLRTARETDITLPPNLAAELRPYQYDGYRWAMTLASAGLGACLADDMGLGKTLQALAVLLARAGGGAGLVIAPTSVC GNWAAEARRFAPTLNVHVYAEGEREALLTQVGAGDLVIVSYTLLQQARQAFCAREWHTVVADEAQAIKNAASRRAQALFD LPSGFRMVLSGTPIENRLAELWSVMRFCNPGLLGSLARFNEHFANPIERSGAREVRQRLRRMIAPFVLRRTKAQVLDELP PRTELVIRVEPAPVEAAHYEALRRQAQSQAEAALARVEAARKATRGAPEGARARAVAQAQFQAEARIHVLAQLMRLRRAA CDARLVTPEVGQAGAKVRTFVDLAGELAANGHKVLVFSQFVDFLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAG EGDVFLISLKAGGFGLNLTAADYVIIADPWWNPAAEDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHKDKRALADG LLDADDEAASGIGAPLPDVDELVGLLRR
Sequences:
>Translated_988_residues MQSDTLPGTDAAPDSSLPAWQQALEALQGLAAGTEGVGIATDRRLLWALTLDADGAVGAIEPLEQVRGARGWGKPRPVPL ARVAEDGQLPAWDTRVAHAIRRDQSHNRRYVLDRAAAIAALVGHPAVVLARSPEQVLEVTEGTPALEAVHTDGRYLLRIY PPLREAPAMEAYLPAAARQDAEALRHITVLRDGPQRLRVIRFTPAQLGAAQLVADGLSIPEAGRAQLDRTLRALAGHFQV EADPTGAVRELEPEARLRAEVAPHGRGIALRLVVTPLGPLGPRLAPGAGRERLMATVRGETLATQRDLDAELANVAEVFA ELPFLVPLAPPDGEHSWVLDDPEDALAVVEALPRLAGVQALEWPRGKEMRVVAADLPQLSVTVETRNTWYRLVGELRVAE GLVLELGKLIDWTGSHAGRFVPMGQGVYIALTRTLRGRLRDLASVADQVPDGIRVPLMATPWLDDVLAGAGVDPDAHFRQ RLARLRTARETDITLPPNLAAELRPYQYDGYRWAMTLASAGLGACLADDMGLGKTLQALAVLLARAGGGAGLVIAPTSVC GNWAAEARRFAPTLNVHVYAEGEREALLTQVGAGDLVIVSYTLLQQARQAFCAREWHTVVADEAQAIKNAASRRAQALFD LPSGFRMVLSGTPIENRLAELWSVMRFCNPGLLGSLARFNEHFANPIERSGAREVRQRLRRMIAPFVLRRTKAQVLDELP PRTELVIRVEPAPVEAAHYEALRRQAQSQAEAALARVEAARKATRGAPEGARARAVAQAQFQAEARIHVLAQLMRLRRAA CDARLVTPEVGQAGAKVRTFVDLAGELAANGHKVLVFSQFVDFLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAG EGDVFLISLKAGGFGLNLTAADYVIIADPWWNPAAEDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHKDKRALADG LLDADDEAASGIGAPLPDVDELVGLLRR >Mature_988_residues MQSDTLPGTDAAPDSSLPAWQQALEALQGLAAGTEGVGIATDRRLLWALTLDADGAVGAIEPLEQVRGARGWGKPRPVPL ARVAEDGQLPAWDTRVAHAIRRDQSHNRRYVLDRAAAIAALVGHPAVVLARSPEQVLEVTEGTPALEAVHTDGRYLLRIY PPLREAPAMEAYLPAAARQDAEALRHITVLRDGPQRLRVIRFTPAQLGAAQLVADGLSIPEAGRAQLDRTLRALAGHFQV EADPTGAVRELEPEARLRAEVAPHGRGIALRLVVTPLGPLGPRLAPGAGRERLMATVRGETLATQRDLDAELANVAEVFA ELPFLVPLAPPDGEHSWVLDDPEDALAVVEALPRLAGVQALEWPRGKEMRVVAADLPQLSVTVETRNTWYRLVGELRVAE GLVLELGKLIDWTGSHAGRFVPMGQGVYIALTRTLRGRLRDLASVADQVPDGIRVPLMATPWLDDVLAGAGVDPDAHFRQ RLARLRTARETDITLPPNLAAELRPYQYDGYRWAMTLASAGLGACLADDMGLGKTLQALAVLLARAGGGAGLVIAPTSVC GNWAAEARRFAPTLNVHVYAEGEREALLTQVGAGDLVIVSYTLLQQARQAFCAREWHTVVADEAQAIKNAASRRAQALFD LPSGFRMVLSGTPIENRLAELWSVMRFCNPGLLGSLARFNEHFANPIERSGAREVRQRLRRMIAPFVLRRTKAQVLDELP PRTELVIRVEPAPVEAAHYEALRRQAQSQAEAALARVEAARKATRGAPEGARARAVAQAQFQAEARIHVLAQLMRLRRAA CDARLVTPEVGQAGAKVRTFVDLAGELAANGHKVLVFSQFVDFLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAG EGDVFLISLKAGGFGLNLTAADYVIIADPWWNPAAEDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHKDKRALADG LLDADDEAASGIGAPLPDVDELVGLLRR
Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI21914927, Length=554, Percent_Identity=29.9638989169675, Blast_Score=252, Evalue=1e-66, Organism=Homo sapiens, GI164419749, Length=472, Percent_Identity=31.7796610169492, Blast_Score=242, Evalue=1e-63, Organism=Homo sapiens, GI27477070, Length=579, Percent_Identity=31.433506044905, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI21071058, Length=519, Percent_Identity=31.5992292870906, Blast_Score=235, Evalue=2e-61, Organism=Homo sapiens, GI21071044, Length=485, Percent_Identity=31.7525773195876, Blast_Score=234, Evalue=3e-61, Organism=Homo sapiens, GI118421089, Length=525, Percent_Identity=30.6666666666667, Blast_Score=222, Evalue=2e-57, Organism=Homo sapiens, GI148612870, Length=479, Percent_Identity=31.5240083507307, Blast_Score=219, Evalue=7e-57, Organism=Homo sapiens, GI192807316, Length=489, Percent_Identity=28.2208588957055, Blast_Score=216, Evalue=1e-55, Organism=Homo sapiens, GI192807314, Length=489, Percent_Identity=28.2208588957055, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI192807320, Length=489, Percent_Identity=28.2208588957055, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI192807318, Length=489, Percent_Identity=28.2208588957055, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI192807323, Length=489, Percent_Identity=28.2208588957055, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI192807312, Length=489, Percent_Identity=28.2208588957055, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI21071056, Length=489, Percent_Identity=28.2208588957055, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI48255898, Length=489, Percent_Identity=27.8118609406953, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI24308089, Length=503, Percent_Identity=29.2246520874751, Blast_Score=214, Evalue=3e-55, Organism=Homo sapiens, GI48255900, Length=489, Percent_Identity=27.8118609406953, Blast_Score=214, Evalue=4e-55, Organism=Homo sapiens, GI6912622, Length=513, Percent_Identity=28.2651072124756, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI68299795, Length=487, Percent_Identity=29.5687885010267, Blast_Score=210, Evalue=5e-54, Organism=Homo sapiens, GI190358534, Length=522, Percent_Identity=28.1609195402299, Blast_Score=210, Evalue=5e-54, Organism=Homo sapiens, GI190358536, Length=522, Percent_Identity=27.9693486590038, Blast_Score=209, Evalue=8e-54, Organism=Homo sapiens, GI190358532, Length=522, Percent_Identity=27.9693486590038, Blast_Score=209, Evalue=8e-54, Organism=Homo sapiens, GI51599156, Length=503, Percent_Identity=29.4234592445328, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI52630326, Length=503, Percent_Identity=29.4234592445328, Blast_Score=208, Evalue=3e-53, Organism=Homo sapiens, GI52630322, Length=503, Percent_Identity=29.4234592445328, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI158420731, Length=503, Percent_Identity=29.4234592445328, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI58331268, Length=513, Percent_Identity=30.0194931773879, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI58219008, Length=527, Percent_Identity=27.8937381404175, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI114326455, Length=497, Percent_Identity=30.3822937625755, Blast_Score=195, Evalue=2e-49, Organism=Homo sapiens, GI282165704, Length=497, Percent_Identity=30.3822937625755, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI29244924, Length=483, Percent_Identity=29.1925465838509, Blast_Score=189, Evalue=2e-47, Organism=Homo sapiens, GI95147342, Length=511, Percent_Identity=28.7671232876712, Blast_Score=186, Evalue=1e-46, Organism=Homo sapiens, GI216548193, Length=514, Percent_Identity=26.4591439688716, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI216548186, Length=514, Percent_Identity=26.4591439688716, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI146219843, Length=246, Percent_Identity=38.2113821138211, Blast_Score=173, Evalue=7e-43, Organism=Homo sapiens, GI54112403, Length=511, Percent_Identity=29.5499021526419, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI40807471, Length=585, Percent_Identity=24.957264957265, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI38708321, Length=275, Percent_Identity=34.9090909090909, Blast_Score=157, Evalue=4e-38, Organism=Homo sapiens, GI168823443, Length=633, Percent_Identity=24.3285939968404, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI187761314, Length=479, Percent_Identity=26.7223382045929, Blast_Score=134, Evalue=6e-31, Organism=Homo sapiens, GI21071060, Length=479, Percent_Identity=26.7223382045929, Blast_Score=134, Evalue=6e-31, Organism=Homo sapiens, GI62860046, Length=467, Percent_Identity=25.4817987152034, Blast_Score=132, Evalue=2e-30, Organism=Homo sapiens, GI4557565, Length=268, Percent_Identity=30.5970149253731, Blast_Score=122, Evalue=2e-27, Organism=Homo sapiens, GI21071052, Length=153, Percent_Identity=39.2156862745098, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI21071054, Length=153, Percent_Identity=39.2156862745098, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI56549696, Length=266, Percent_Identity=31.5789473684211, Blast_Score=113, Evalue=8e-25, Organism=Homo sapiens, GI20336205, Length=295, Percent_Identity=27.7966101694915, Blast_Score=97, Evalue=1e-19, Organism=Homo sapiens, GI20336209, Length=294, Percent_Identity=26.8707482993197, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI289547541, Length=134, Percent_Identity=33.5820895522388, Blast_Score=78, Evalue=5e-14, Organism=Homo sapiens, GI27436873, Length=134, Percent_Identity=33.5820895522388, Blast_Score=78, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25144179, Length=470, Percent_Identity=31.4893617021277, Blast_Score=237, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17539642, Length=504, Percent_Identity=29.7619047619048, Blast_Score=226, Evalue=4e-59, Organism=Caenorhabditis elegans, GI17551114, Length=496, Percent_Identity=29.8387096774194, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI193204424, Length=506, Percent_Identity=31.4229249011858, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71988744, Length=524, Percent_Identity=29.1984732824427, Blast_Score=218, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17569817, Length=539, Percent_Identity=28.7569573283859, Blast_Score=214, Evalue=2e-55, Organism=Caenorhabditis elegans, GI32563629, Length=482, Percent_Identity=30.4979253112033, Blast_Score=211, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17562600, Length=504, Percent_Identity=28.968253968254, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17508659, Length=527, Percent_Identity=27.3244781783681, Blast_Score=189, Evalue=5e-48, Organism=Caenorhabditis elegans, GI71995707, Length=518, Percent_Identity=27.027027027027, Blast_Score=178, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71991518, Length=488, Percent_Identity=25.8196721311475, Blast_Score=176, Evalue=6e-44, Organism=Caenorhabditis elegans, GI193203140, Length=511, Percent_Identity=30.3326810176125, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI115534248, Length=243, Percent_Identity=36.2139917695473, Blast_Score=160, Evalue=3e-39, Organism=Caenorhabditis elegans, GI25148958, Length=465, Percent_Identity=24.9462365591398, Blast_Score=135, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17552194, Length=465, Percent_Identity=24.9462365591398, Blast_Score=135, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148960, Length=465, Percent_Identity=24.9462365591398, Blast_Score=135, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17540630, Length=154, Percent_Identity=37.6623376623377, Blast_Score=120, Evalue=5e-27, Organism=Caenorhabditis elegans, GI193203249, Length=163, Percent_Identity=34.9693251533742, Blast_Score=107, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17561718, Length=156, Percent_Identity=34.6153846153846, Blast_Score=90, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17538806, Length=169, Percent_Identity=31.9526627218935, Blast_Score=89, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71980419, Length=181, Percent_Identity=29.2817679558011, Blast_Score=81, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6325175, Length=545, Percent_Identity=30.0917431192661, Blast_Score=244, Evalue=7e-65, Organism=Saccharomyces cerevisiae, GI6321153, Length=526, Percent_Identity=29.467680608365, Blast_Score=237, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6322065, Length=486, Percent_Identity=31.4814814814815, Blast_Score=237, Evalue=8e-63, Organism=Saccharomyces cerevisiae, GI6324864, Length=496, Percent_Identity=30.4435483870968, Blast_Score=232, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6319722, Length=476, Percent_Identity=30.4621848739496, Blast_Score=229, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6321012, Length=493, Percent_Identity=30.8316430020284, Blast_Score=226, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6324879, Length=474, Percent_Identity=31.8565400843882, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6322495, Length=548, Percent_Identity=27.5547445255474, Blast_Score=190, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6321275, Length=517, Percent_Identity=27.2727272727273, Blast_Score=184, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6319547, Length=567, Percent_Identity=26.984126984127, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6320541, Length=291, Percent_Identity=31.9587628865979, Blast_Score=155, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6321289, Length=285, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6319300, Length=271, Percent_Identity=32.8413284132841, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319590, Length=178, Percent_Identity=35.9550561797753, Blast_Score=117, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6323060, Length=144, Percent_Identity=38.8888888888889, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6324765, Length=134, Percent_Identity=38.8059701492537, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI281361889, Length=524, Percent_Identity=31.2977099236641, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI24653134, Length=473, Percent_Identity=32.3467230443975, Blast_Score=235, Evalue=1e-61, Organism=Drosophila melanogaster, GI24653132, Length=473, Percent_Identity=32.3467230443975, Blast_Score=235, Evalue=1e-61, Organism=Drosophila melanogaster, GI17737463, Length=473, Percent_Identity=32.3467230443975, Blast_Score=235, Evalue=1e-61, Organism=Drosophila melanogaster, GI24664914, Length=492, Percent_Identity=28.2520325203252, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI17985967, Length=492, Percent_Identity=28.2520325203252, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI24664907, Length=492, Percent_Identity=28.2520325203252, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI28574896, Length=492, Percent_Identity=28.2520325203252, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI85724914, Length=500, Percent_Identity=31, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583161, Length=500, Percent_Identity=31, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI24666729, Length=499, Percent_Identity=27.8557114228457, Blast_Score=213, Evalue=5e-55, Organism=Drosophila melanogaster, GI17137266, Length=486, Percent_Identity=29.6296296296296, Blast_Score=213, Evalue=5e-55, Organism=Drosophila melanogaster, GI281366478, Length=503, Percent_Identity=27.4353876739563, Blast_Score=200, Evalue=5e-51, Organism=Drosophila melanogaster, GI24667055, Length=503, Percent_Identity=27.4353876739563, Blast_Score=200, Evalue=5e-51, Organism=Drosophila melanogaster, GI62472261, Length=503, Percent_Identity=27.4353876739563, Blast_Score=200, Evalue=5e-51, Organism=Drosophila melanogaster, GI17136368, Length=514, Percent_Identity=28.0155642023346, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI28573600, Length=265, Percent_Identity=35.8490566037736, Blast_Score=171, Evalue=2e-42, Organism=Drosophila melanogaster, GI24656966, Length=265, Percent_Identity=35.8490566037736, Blast_Score=171, Evalue=2e-42, Organism=Drosophila melanogaster, GI24656962, Length=265, Percent_Identity=35.8490566037736, Blast_Score=171, Evalue=3e-42, Organism=Drosophila melanogaster, GI221330583, Length=497, Percent_Identity=28.3702213279678, Blast_Score=166, Evalue=1e-40, Organism=Drosophila melanogaster, GI17986031, Length=497, Percent_Identity=28.3702213279678, Blast_Score=166, Evalue=1e-40, Organism=Drosophila melanogaster, GI24648168, Length=275, Percent_Identity=36, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24581780, Length=495, Percent_Identity=25.8585858585859, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI85724912, Length=264, Percent_Identity=31.0606060606061, Blast_Score=122, Evalue=1e-27, Organism=Drosophila melanogaster, GI24644932, Length=162, Percent_Identity=35.1851851851852, Blast_Score=103, Evalue=8e-22, Organism=Drosophila melanogaster, GI281361297, Length=151, Percent_Identity=35.7615894039735, Blast_Score=96, Evalue=1e-19, Organism=Drosophila melanogaster, GI62484263, Length=160, Percent_Identity=33.75, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356675, Length=281, Percent_Identity=27.4021352313167, Blast_Score=92, Evalue=2e-18, Organism=Drosophila melanogaster, GI24650076, Length=281, Percent_Identity=27.4021352313167, Blast_Score=92, Evalue=2e-18, Organism=Drosophila melanogaster, GI24659216, Length=145, Percent_Identity=32.4137931034483, Blast_Score=76, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022138 - InterPro: IPR000330 [H]
Pfam domain/function: PF12419 DUF3670; PF00271 Helicase_C; PF00176 SNF2_N [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 106801; Mature: 106801
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDTLPGTDAAPDSSLPAWQQALEALQGLAAGTEGVGIATDRRLLWALTLDADGAVGAI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCCCCCHH EPLEQVRGARGWGKPRPVPLARVAEDGQLPAWDTRVAHAIRRDQSHNRRYVLDRAAAIAA HHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LVGHPAVVLARSPEQVLEVTEGTPALEAVHTDGRYLLRIYPPLREAPAMEAYLPAAARQD HHCCCEEEEECCHHHHHHHCCCCCHHEEEECCCEEEEEECCCHHCCCCHHHHCCHHHHHH AEALRHITVLRDGPQRLRVIRFTPAQLGAAQLVADGLSIPEAGRAQLDRTLRALAGHFQV HHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEE EADPTGAVRELEPEARLRAEVAPHGRGIALRLVVTPLGPLGPRLAPGAGRERLMATVRGE ECCCCCCHHHCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC TLATQRDLDAELANVAEVFAELPFLVPLAPPDGEHSWVLDDPEDALAVVEALPRLAGVQA HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCH LEWPRGKEMRVVAADLPQLSVTVETRNTWYRLVGELRVAEGLVLELGKLIDWTGSHAGRF HCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VPMGQGVYIALTRTLRGRLRDLASVADQVPDGIRVPLMATPWLDDVLAGAGVDPDAHFRQ EECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEECEEECCCHHHHHHCCCCCCCHHHHH RLARLRTARETDITLPPNLAAELRPYQYDGYRWAMTLASAGLGACLADDMGLGKTLQALA HHHHHHHCCCCCCCCCCCCHHHCCCCEECCEEEEHHHHHCCCCHHHHCCCCCCHHHHHHH VLLARAGGGAGLVIAPTSVCGNWAAEARRFAPTLNVHVYAEGEREALLTQVGAGDLVIVS HHHHHCCCCCEEEEECHHHHCHHHHHHHHCCCEEEEEEEECCCHHHHHHHCCCCCEEEHH YTLLQQARQAFCAREWHTVVADEAQAIKNAASRRAQALFDLPSGFRMVLSGTPIENRLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH LWSVMRFCNPGLLGSLARFNEHFANPIERSGAREVRQRLRRMIAPFVLRRTKAQVLDELP HHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRTELVIRVEPAPVEAAHYEALRRQAQSQAEAALARVEAARKATRGAPEGARARAVAQAQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FQAEARIHVLAQLMRLRRAACDARLVTPEVGQAGAKVRTFVDLAGELAANGHKVLVFSQF HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHH VDFLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLTA HHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHEEECCCCCEEEEEEECCCCEEEEEE ADYVIIADPWWNPAAEDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHKDKRALADG CCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHC LLDADDEAASGIGAPLPDVDELVGLLRR CCCCCCHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MQSDTLPGTDAAPDSSLPAWQQALEALQGLAAGTEGVGIATDRRLLWALTLDADGAVGAI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCCCCCHH EPLEQVRGARGWGKPRPVPLARVAEDGQLPAWDTRVAHAIRRDQSHNRRYVLDRAAAIAA HHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LVGHPAVVLARSPEQVLEVTEGTPALEAVHTDGRYLLRIYPPLREAPAMEAYLPAAARQD HHCCCEEEEECCHHHHHHHCCCCCHHEEEECCCEEEEEECCCHHCCCCHHHHCCHHHHHH AEALRHITVLRDGPQRLRVIRFTPAQLGAAQLVADGLSIPEAGRAQLDRTLRALAGHFQV HHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEE EADPTGAVRELEPEARLRAEVAPHGRGIALRLVVTPLGPLGPRLAPGAGRERLMATVRGE ECCCCCCHHHCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC TLATQRDLDAELANVAEVFAELPFLVPLAPPDGEHSWVLDDPEDALAVVEALPRLAGVQA HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCH LEWPRGKEMRVVAADLPQLSVTVETRNTWYRLVGELRVAEGLVLELGKLIDWTGSHAGRF HCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VPMGQGVYIALTRTLRGRLRDLASVADQVPDGIRVPLMATPWLDDVLAGAGVDPDAHFRQ EECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEECEEECCCHHHHHHCCCCCCCHHHHH RLARLRTARETDITLPPNLAAELRPYQYDGYRWAMTLASAGLGACLADDMGLGKTLQALA HHHHHHHCCCCCCCCCCCCHHHCCCCEECCEEEEHHHHHCCCCHHHHCCCCCCHHHHHHH VLLARAGGGAGLVIAPTSVCGNWAAEARRFAPTLNVHVYAEGEREALLTQVGAGDLVIVS HHHHHCCCCCEEEEECHHHHCHHHHHHHHCCCEEEEEEEECCCHHHHHHHCCCCCEEEHH YTLLQQARQAFCAREWHTVVADEAQAIKNAASRRAQALFDLPSGFRMVLSGTPIENRLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH LWSVMRFCNPGLLGSLARFNEHFANPIERSGAREVRQRLRRMIAPFVLRRTKAQVLDELP HHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRTELVIRVEPAPVEAAHYEALRRQAQSQAEAALARVEAARKATRGAPEGARARAVAQAQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FQAEARIHVLAQLMRLRRAACDARLVTPEVGQAGAKVRTFVDLAGELAANGHKVLVFSQF HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHH VDFLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLTA HHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHEEECCCCCEEEEEEECCCCEEEEEE ADYVIIADPWWNPAAEDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHKDKRALADG CCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHC LLDADDEAASGIGAPLPDVDELVGLLRR CCCCCCHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9353933 [H]