Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71908380

Identifier: 71908380

GI number: 71908380

Start: 2967613

End: 2968182

Strand: Reverse

Name: 71908380

Synonym: Daro_2767

Alternate gene names: NA

Gene position: 2968182-2967613 (Counterclockwise)

Preceding gene: 71908381

Following gene: 71908379

Centisome position: 65.94

GC content: 62.28

Gene sequence:

>570_bases
ATGAATAAATCTCTCGACATCATCCACGATGAACACCGGGCCCTGGCGGCCATGCTCAGCGGCCTGCGTACCCTGGTCGC
CGAAATCGAAGCCGGTCGTCAGCAGCCGGATTTCGATCTGCTCGCTTCGATGATCCGCTACGTCGACGAGGTGCCGGAAA
AGGTGCACCACCCGAAGGAGGATCAATATCTCTTCGCCAAACTGCGCCTGCGCAGCCCGGAAGCCTTGCCCGTCATCGAG
CAACTGGAAGCCGACCATCTGCAGGGCGAGGCGAGGATCAGCGCGCTGCGTGCCGCGCTGGCCGCCTATCGTCAGCAAGG
GGCGGCCGGATTGGCCAGTTTCAAGCTGGCCCTGACCATCTACCTCGAGCAGGAATGGCATCACATGAATACCGAGGAGC
ACAAACTCTTTCCGCTGGCCAAGGCGCATCTGACCGCCGAGGACTGGGCGGAGATCGACGCGGCCTTCCTGGCCAACGGC
AATCCCTGGGAGGGGTCTGCCGGCGAGTACGCCGCGCTGTTCTCGAAAATAGTCAATATGGTGCCGGCACCGGTCGGTCT
CGGCGGTTGA

Upstream 100 bases:

>100_bases
TGGTCTTCGATGGCAGCAGCGACGAGGTGCGGGCCGATCCGGAATTGATCCAGAAACACCTGGGCGTTTGATCGCCCGGG
GTTTTTTGCAAGGAAAAATC

Downstream 100 bases:

>100_bases
TCGCGCCCCGTTCCCGATCCCCGCATGTCGATGCCTTCCCGTGATCTGCTGGCGACGCTCGCCCCCGGACTGTTCGTCTT
CCTGTGGAGCACCGGTTTCA

Product: hemerythrin HHE cation binding region

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKEDQYLFAKLRLRSPEALPVIE
QLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTIYLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANG
NPWEGSAGEYAALFSKIVNMVPAPVGLGG

Sequences:

>Translated_189_residues
MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKEDQYLFAKLRLRSPEALPVIE
QLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTIYLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANG
NPWEGSAGEYAALFSKIVNMVPAPVGLGG
>Mature_189_residues
MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKEDQYLFAKLRLRSPEALPVIE
QLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTIYLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANG
NPWEGSAGEYAALFSKIVNMVPAPVGLGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20928; Mature: 20928

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DQYLFAKLRLRSPEALPVIEQLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTI
CCEEHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE
YLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANGNPWEGSAGEYAALFSKIVNM
EEEHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
VPAPVGLGG
CCCCCCCCC
>Mature Secondary Structure
MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DQYLFAKLRLRSPEALPVIEQLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTI
CCEEHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE
YLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANGNPWEGSAGEYAALFSKIVNM
EEEHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
VPAPVGLGG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA