| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71908303
Identifier: 71908303
GI number: 71908303
Start: 2884509
End: 2885129
Strand: Reverse
Name: 71908303
Synonym: Daro_2690
Alternate gene names: NA
Gene position: 2885129-2884509 (Counterclockwise)
Preceding gene: 71908304
Following gene: 71908302
Centisome position: 64.1
GC content: 50.08
Gene sequence:
>621_bases ATGGAAACGAACATTCAGCCAGCAACGCAAATCAACCAATCCAGTAATAGGAAATTTAAGGAGAAATACAGCATGAATAC TGCCGGTGAAGCCAAGACTGAAGCCGCCCCCATTGAGGTGAAGGATACTGAGAGCGCCGCTGTGAAGCCGGTATCTAAGG CTGCAGCCAAAACAATCGAGAAAGCTGCGTATGACGTAGAAAGCATTCATGCCGATTTTGTTACCAACGCAGACAAGATT CATTTGCTGAAGGAAGAGCTAAAGAAACTTGAGGCACGGCAGGCGCTATACCGCAGAGTCATCGCGGGTCCAGCCCAACG CCTTATCTACGCATGGACTCAAGACTTTAATAATCAAGAGAAGCGCTTTATCAGGTTGCTGACTGAGCAGTACGAAGACA AGAAAGCGCAGTACATCGATCTTTCGTCACTCGGCGCTCTCTGGCACTTCAACAAGGATGCGATCAGCGATCAGCTTCCG GCCCTTGCGTTCGCTGTCGCAGGCCCTTCCGCGATGCACGAAAGCTGCCGTGATGCCGGTGGTTATTACCCTGTCGTGCC CCGAATTATCGAAATACGTGCCGAGCTTGAAGAGTTGGGTGTCGTTGATAAAACAAACTGA
Upstream 100 bases:
>100_bases GCGCCCAGAACATCAACGAGATTAAATCCATCGTCCAGCAAATCCGCGAAGAGAAGGCGCGCAAGGCGGCGCAAGCCGGA ACGCTGGCAGGGCTGTTGTG
Downstream 100 bases:
>100_bases CATAGCGCCAAACCACACACGAAGGAAGCATGATGGCAGATATCAATTACCCCGCTGAGTACGACACCCGTAGCGAATCC CAACGAGCCGACGCATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues METNIQPATQINQSSNRKFKEKYSMNTAGEAKTEAAPIEVKDTESAAVKPVSKAAAKTIEKAAYDVESIHADFVTNADKI HLLKEELKKLEARQALYRRVIAGPAQRLIYAWTQDFNNQEKRFIRLLTEQYEDKKAQYIDLSSLGALWHFNKDAISDQLP ALAFAVAGPSAMHESCRDAGGYYPVVPRIIEIRAELEELGVVDKTN
Sequences:
>Translated_206_residues METNIQPATQINQSSNRKFKEKYSMNTAGEAKTEAAPIEVKDTESAAVKPVSKAAAKTIEKAAYDVESIHADFVTNADKI HLLKEELKKLEARQALYRRVIAGPAQRLIYAWTQDFNNQEKRFIRLLTEQYEDKKAQYIDLSSLGALWHFNKDAISDQLP ALAFAVAGPSAMHESCRDAGGYYPVVPRIIEIRAELEELGVVDKTN >Mature_206_residues METNIQPATQINQSSNRKFKEKYSMNTAGEAKTEAAPIEVKDTESAAVKPVSKAAAKTIEKAAYDVESIHADFVTNADKI HLLKEELKKLEARQALYRRVIAGPAQRLIYAWTQDFNNQEKRFIRLLTEQYEDKKAQYIDLSSLGALWHFNKDAISDQLP ALAFAVAGPSAMHESCRDAGGYYPVVPRIIEIRAELEELGVVDKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23099; Mature: 23099
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNIQPATQINQSSNRKFKEKYSMNTAGEAKTEAAPIEVKDTESAAVKPVSKAAAKTIE CCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH KAAYDVESIHADFVTNADKIHLLKEELKKLEARQALYRRVIAGPAQRLIYAWTQDFNNQE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHH KRFIRLLTEQYEDKKAQYIDLSSLGALWHFNKDAISDQLPALAFAVAGPSAMHESCRDAG HHHHHHHHHHHHHHHHHEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC GYYPVVPRIIEIRAELEELGVVDKTN CCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure METNIQPATQINQSSNRKFKEKYSMNTAGEAKTEAAPIEVKDTESAAVKPVSKAAAKTIE CCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH KAAYDVESIHADFVTNADKIHLLKEELKKLEARQALYRRVIAGPAQRLIYAWTQDFNNQE HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHH KRFIRLLTEQYEDKKAQYIDLSSLGALWHFNKDAISDQLPALAFAVAGPSAMHESCRDAG HHHHHHHHHHHHHHHHHEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC GYYPVVPRIIEIRAELEELGVVDKTN CCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA