| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908301
Identifier: 71908301
GI number: 71908301
Start: 2883043
End: 2883432
Strand: Reverse
Name: 71908301
Synonym: Daro_2688
Alternate gene names: NA
Gene position: 2883432-2883043 (Counterclockwise)
Preceding gene: 71908302
Following gene: 71908300
Centisome position: 64.06
GC content: 54.62
Gene sequence:
>390_bases ATGTCACATCAGGCAATCATCAGAAACGATGTCACCTTTGACCGTCCGCAAGCGCGGATTACCACCGACCAAATCCACGA CCTAGCCAAGACGATAGACGGATCATTCACAACTTGCGATCTGTCTGACCTCCTTGTGGAGTCGGGCAAGTGTCGCGGCA TGTCGTATGCGCAGATTGAACGGGCGGTACGTGGCGCGATGTCCTGGCTGGTCCTCCGTGAGATTGCCTACGTCGACGGG CAAATCAAGAAAATTACCGATGCCGGCGTTATCTCTAAACCATTTGTATATCGGCTGTACCTAGGCAGAACATGGGACAA GGATCGGCGTGAGGCAGTCCGCAGCAGTGCAGGTCTGAACTTGCTGGAACGGGCGCTCGGCTATTGCTGA
Upstream 100 bases:
>100_bases AAATGGCAATTGAGCAAGCCTTGGATATTGCCACTGGCAAAGCCTGTAAATACTGGCTACCCAGCCAAACTTGCGACATC TCTCTTGTACGGGGCTAGCT
Downstream 100 bases:
>100_bases CACTAACCTGATTAGGTGGTCTACGGAGATCAAGGCCAGAACCCAGTGCAGTCGCAAACATGACTCCGAAACTGTTGGAA ATCGCCAGGTGATCATATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSHQAIIRNDVTFDRPQARITTDQIHDLAKTIDGSFTTCDLSDLLVESGKCRGMSYAQIERAVRGAMSWLVLREIAYVDG QIKKITDAGVISKPFVYRLYLGRTWDKDRREAVRSSAGLNLLERALGYC
Sequences:
>Translated_129_residues MSHQAIIRNDVTFDRPQARITTDQIHDLAKTIDGSFTTCDLSDLLVESGKCRGMSYAQIERAVRGAMSWLVLREIAYVDG QIKKITDAGVISKPFVYRLYLGRTWDKDRREAVRSSAGLNLLERALGYC >Mature_128_residues SHQAIIRNDVTFDRPQARITTDQIHDLAKTIDGSFTTCDLSDLLVESGKCRGMSYAQIERAVRGAMSWLVLREIAYVDGQ IKKITDAGVISKPFVYRLYLGRTWDKDRREAVRSSAGLNLLERALGYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14570; Mature: 14439
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQAIIRNDVTFDRPQARITTDQIHDLAKTIDGSFTTCDLSDLLVESGKCRGMSYAQIE CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHCCCCCCCHHHHHH RAVRGAMSWLVLREIAYVDGQIKKITDAGVISKPFVYRLYLGRTWDKDRREAVRSSAGLN HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHH LLERALGYC HHHHHHCCC >Mature Secondary Structure SHQAIIRNDVTFDRPQARITTDQIHDLAKTIDGSFTTCDLSDLLVESGKCRGMSYAQIE CCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHCCCCCCCHHHHHH RAVRGAMSWLVLREIAYVDGQIKKITDAGVISKPFVYRLYLGRTWDKDRREAVRSSAGLN HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHH LLERALGYC HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA