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The map label for this gene is ycgE [C]

Identifier: 71908283

GI number: 71908283

Start: 2867302

End: 2867679

Strand: Reverse

Name: ycgE [C]

Synonym: Daro_2670

Alternate gene names: 71908283

Gene position: 2867679-2867302 (Counterclockwise)

Preceding gene: 71908284

Following gene: 71908282

Centisome position: 63.71

GC content: 52.65

Gene sequence:

>378_bases
ATGGAACCGCGGCATAAGACTACGGGCGGGGAAGAACTACCGCCCATTCCGGCCAAGCGCTACTTCACCATTGGTGAAGT
CAGTGAATTGTGCGGTGTGAAGCCGCATGTGCTTCGTTATTGGGAGCAGGAGTTTAATCAACTCAAGCCGGTAAAGCGTC
GGGGTAATCGTCGCTATTACCAGCACCATGAAGTCTTGCTGGTTCGCCGGATTCGAGAGCTTCTTTACAATCAGGGCTTT
ACCATAAGCGGTGCTCGTAATCGCCTCGATGAAGGTGGCGCTGTCGAGGTTGCTTCGGTTGCTCATCCGGAAATGGAAAA
AATCCCGGGCGGCCTGCGCGGTGAATTGAAATCAATTATCGAGATGCTGCAGCTTTGA

Upstream 100 bases:

>100_bases
CGCAACCCTAAAACCGGGCAGGAAATCCCAATTACGGCGCGTCGTGTTGTAACTTTTCACGCCAGCCAAAAACTGAAGTC
AGACGTCGAGCTAGCTTTTG

Downstream 100 bases:

>100_bases
ATCCCGGTGTTTTCAGGTATAATGTTTGGCTTGTCGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGG
GTCGCGAGTTCGAATCCCGC

Product: regulatory protein, MerR

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; MerR Family Regulatory Family; Transcriptional Regulator Protein; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEPRHKTTGGEELPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFNQLKPVKRRGNRRYYQHHEVLLVRRIRELLYNQGF
TISGARNRLDEGGAVEVASVAHPEMEKIPGGLRGELKSIIEMLQL

Sequences:

>Translated_125_residues
MEPRHKTTGGEELPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFNQLKPVKRRGNRRYYQHHEVLLVRRIRELLYNQGF
TISGARNRLDEGGAVEVASVAHPEMEKIPGGLRGELKSIIEMLQL
>Mature_125_residues
MEPRHKTTGGEELPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFNQLKPVKRRGNRRYYQHHEVLLVRRIRELLYNQGF
TISGARNRLDEGGAVEVASVAHPEMEKIPGGLRGELKSIIEMLQL

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14446; Mature: 14446

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRHKTTGGEELPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFNQLKPVKRRGNRRYY
CCCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
QHHEVLLVRRIRELLYNQGFTISGARNRLDEGGAVEVASVAHPEMEKIPGGLRGELKSII
HHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEHHHCCCHHHHCCCCHHHHHHHHH
EMLQL
HHHCC
>Mature Secondary Structure
MEPRHKTTGGEELPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFNQLKPVKRRGNRRYY
CCCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
QHHEVLLVRRIRELLYNQGFTISGARNRLDEGGAVEVASVAHPEMEKIPGGLRGELKSII
HHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEHHHCCCHHHHCCCCHHHHHHHHH
EMLQL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA