| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908279
Identifier: 71908279
GI number: 71908279
Start: 2861689
End: 2863179
Strand: Reverse
Name: 71908279
Synonym: Daro_2666
Alternate gene names: NA
Gene position: 2863179-2861689 (Counterclockwise)
Preceding gene: 71908280
Following gene: 71908278
Centisome position: 63.61
GC content: 57.21
Gene sequence:
>1491_bases ATGGACGCCATCGGATACGAATACCTCCGGACCCAACTCGGGCTCTCGGTGTTTCCCGTCGCTCATCCCGCCAGTATCCG TCCGGTGAGCCGGATACTGGACGTCCAGGACGAACTACAGGTACCCAAGGGGGTCGCCCCGAAATCTGGCCACCCCATTG AACACTTGCTGTTTGCCCTCCGCTATGAGGGAATCAATCTGCAAATACTCGCCGAAACCATGCCGAAAATTGCCGGGGAG GATCTCATCGCCCGTTTGCGGGAATCGCCCTCCGGCTTGTTCATCCGGAAAGCGTGTTATCTCTGGGAGTGGTTCGCCAA CGGCGAACTTTCCAACCTGCCAGCCATTGCCGGGCCGTACGGTGATCTGTTCGACCCCGCGGATTACGTCACCGGAATCG TGCGCAAGGATGCCAAGTGGCGAATCAACTTCAACGGCCTCGGCTCTGCCGAGTACTGTCCGGTAGTCCGCCTTACCCAA CTGGTCAAGGATGGGATCGCAAGCGACGTCCTTGGACGGACGAAGGCATTTCTGGAATCCTTGGGTCCGACCAATGCGGA CCGGACCCTCTCCTGGGCGTACCTCAGCGAGACCGATAGTTCTTTCGCCATTGAGCGGGAAGCGCCGAGCCAGAGCAAGG CAGAGACCTTTGTCGCCCTTCTCCAGCAGGCCCACGAAAAAATTGAATTGACCGAGGAATACCTGGCCGACTTGCAATCC GCGACAATCAGCAACCCCTATGAAAAAGCGGCCTGTTTTCGCCATGAACAAAACTGGCTGCGAGGGGGGGGGCTCAGGGG GGCGGGCAGTGTGACCTACATTCCGCCTTCGCCGGAATTGCTTTCCAAACTTATGCCTGCGTTCATGGACATGGCCAACT CCCTCCCACGTCAGAGCGACCCGGTCGTAGCCGCCTCCGTGGCTTCGTTCGGGTTCGTCTACCTGCACCCATTCATGGAT GGGAACGGACGTCTGTCGCGCTTCCTATTCCACCATGCCCTATGCCAATCAGGAAGGCTTGATCAAGGCCTGCTGTTGCC CGTATCAGTCGCGATGAAACGCCATGAAACGGAATACCTGGAGGCGCTCCAATCGTTCTCGAAGCCCGCACGGAAGCTGT GGGATGTCTACTGGGCCGACGAGGACCTGTTTGATTTCAAATTCAAAGGCGCCGATTCTATCTACCGTTTTTGGGATGCG ACAAAGTGCGTCGAATTCGGTTACCGAATGGCGGAGCAGGCGCTGGGCGTCGATCTCCGTCAGGAAACCGAATTCTTGGC GAGCTTTGACCGGATCAGTAAAGCCGTCAACGACGAGTTCGATATCCGCGGAAACGATCTGCACCTCCTCATTGTTTCCG CGCTACAGAACGGAGGCAGGGTATCCAACAACCGCCGGAAAAAACTGGCAGGCAGGGTGCCAGAGGAAGCGTTTGATTTT GTCGAACGCTTGGCCAAGACCGAATTGACTGAACTCAACGACGTCGAATGA
Upstream 100 bases:
>100_bases GCCATAGCCTTTGGTGAAAACGAGTAAAAAATCTTGACGGATTGGCAAATAAATAAAAAAATCCATGGTCAGTTAAAATT TTCCGTGCAGGAGTGCAATC
Downstream 100 bases:
>100_bases TTTGCTGCTTTTCATTCCGCACATGAAAGACCAGCTAGGGCGGCAGGCCTTGGTAGTGGAAATGTTGGCTGGATAGTTCG CGATAGGCTTGCAACCTGCG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Filamentation Induced By CAMP Protein
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MDAIGYEYLRTQLGLSVFPVAHPASIRPVSRILDVQDELQVPKGVAPKSGHPIEHLLFALRYEGINLQILAETMPKIAGE DLIARLRESPSGLFIRKACYLWEWFANGELSNLPAIAGPYGDLFDPADYVTGIVRKDAKWRINFNGLGSAEYCPVVRLTQ LVKDGIASDVLGRTKAFLESLGPTNADRTLSWAYLSETDSSFAIEREAPSQSKAETFVALLQQAHEKIELTEEYLADLQS ATISNPYEKAACFRHEQNWLRGGGLRGAGSVTYIPPSPELLSKLMPAFMDMANSLPRQSDPVVAASVASFGFVYLHPFMD GNGRLSRFLFHHALCQSGRLDQGLLLPVSVAMKRHETEYLEALQSFSKPARKLWDVYWADEDLFDFKFKGADSIYRFWDA TKCVEFGYRMAEQALGVDLRQETEFLASFDRISKAVNDEFDIRGNDLHLLIVSALQNGGRVSNNRRKKLAGRVPEEAFDF VERLAKTELTELNDVE
Sequences:
>Translated_496_residues MDAIGYEYLRTQLGLSVFPVAHPASIRPVSRILDVQDELQVPKGVAPKSGHPIEHLLFALRYEGINLQILAETMPKIAGE DLIARLRESPSGLFIRKACYLWEWFANGELSNLPAIAGPYGDLFDPADYVTGIVRKDAKWRINFNGLGSAEYCPVVRLTQ LVKDGIASDVLGRTKAFLESLGPTNADRTLSWAYLSETDSSFAIEREAPSQSKAETFVALLQQAHEKIELTEEYLADLQS ATISNPYEKAACFRHEQNWLRGGGLRGAGSVTYIPPSPELLSKLMPAFMDMANSLPRQSDPVVAASVASFGFVYLHPFMD GNGRLSRFLFHHALCQSGRLDQGLLLPVSVAMKRHETEYLEALQSFSKPARKLWDVYWADEDLFDFKFKGADSIYRFWDA TKCVEFGYRMAEQALGVDLRQETEFLASFDRISKAVNDEFDIRGNDLHLLIVSALQNGGRVSNNRRKKLAGRVPEEAFDF VERLAKTELTELNDVE >Mature_496_residues MDAIGYEYLRTQLGLSVFPVAHPASIRPVSRILDVQDELQVPKGVAPKSGHPIEHLLFALRYEGINLQILAETMPKIAGE DLIARLRESPSGLFIRKACYLWEWFANGELSNLPAIAGPYGDLFDPADYVTGIVRKDAKWRINFNGLGSAEYCPVVRLTQ LVKDGIASDVLGRTKAFLESLGPTNADRTLSWAYLSETDSSFAIEREAPSQSKAETFVALLQQAHEKIELTEEYLADLQS ATISNPYEKAACFRHEQNWLRGGGLRGAGSVTYIPPSPELLSKLMPAFMDMANSLPRQSDPVVAASVASFGFVYLHPFMD GNGRLSRFLFHHALCQSGRLDQGLLLPVSVAMKRHETEYLEALQSFSKPARKLWDVYWADEDLFDFKFKGADSIYRFWDA TKCVEFGYRMAEQALGVDLRQETEFLASFDRISKAVNDEFDIRGNDLHLLIVSALQNGGRVSNNRRKKLAGRVPEEAFDF VERLAKTELTELNDVE
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55569; Mature: 55569
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIGYEYLRTQLGLSVFPVAHPASIRPVSRILDVQDELQVPKGVAPKSGHPIEHLLFAL CCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHH RYEGINLQILAETMPKIAGEDLIARLRESPSGLFIRKACYLWEWFANGELSNLPAIAGPY HHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCC GDLFDPADYVTGIVRKDAKWRINFNGLGSAEYCPVVRLTQLVKDGIASDVLGRTKAFLES CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPTNADRTLSWAYLSETDSSFAIEREAPSQSKAETFVALLQQAHEKIELTEEYLADLQS CCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATISNPYEKAACFRHEQNWLRGGGLRGAGSVTYIPPSPELLSKLMPAFMDMANSLPRQSD HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCC PVVAASVASFGFVYLHPFMDGNGRLSRFLFHHALCQSGRLDQGLLLPVSVAMKRHETEYL CCHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH EALQSFSKPARKLWDVYWADEDLFDFKFKGADSIYRFWDATKCVEFGYRMAEQALGVDLR HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QETEFLASFDRISKAVNDEFDIRGNDLHLLIVSALQNGGRVSNNRRKKLAGRVPEEAFDF HHHHHHHHHHHHHHHHCCCCCCCCCCEEEHEEHHHHCCCCCCCCHHHHHHCCCCHHHHHH VERLAKTELTELNDVE HHHHHHHHHHHCCCCC >Mature Secondary Structure MDAIGYEYLRTQLGLSVFPVAHPASIRPVSRILDVQDELQVPKGVAPKSGHPIEHLLFAL CCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHH RYEGINLQILAETMPKIAGEDLIARLRESPSGLFIRKACYLWEWFANGELSNLPAIAGPY HHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCC GDLFDPADYVTGIVRKDAKWRINFNGLGSAEYCPVVRLTQLVKDGIASDVLGRTKAFLES CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPTNADRTLSWAYLSETDSSFAIEREAPSQSKAETFVALLQQAHEKIELTEEYLADLQS CCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATISNPYEKAACFRHEQNWLRGGGLRGAGSVTYIPPSPELLSKLMPAFMDMANSLPRQSD HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCC PVVAASVASFGFVYLHPFMDGNGRLSRFLFHHALCQSGRLDQGLLLPVSVAMKRHETEYL CCHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH EALQSFSKPARKLWDVYWADEDLFDFKFKGADSIYRFWDATKCVEFGYRMAEQALGVDLR HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QETEFLASFDRISKAVNDEFDIRGNDLHLLIVSALQNGGRVSNNRRKKLAGRVPEEAFDF HHHHHHHHHHHHHHHHCCCCCCCCCCEEEHEEHHHHCCCCCCCCHHHHHHCCCCHHHHHH VERLAKTELTELNDVE HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA