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The map label for this gene is 71908204

Identifier: 71908204

GI number: 71908204

Start: 2791110

End: 2791682

Strand: Reverse

Name: 71908204

Synonym: Daro_2590

Alternate gene names: NA

Gene position: 2791682-2791110 (Counterclockwise)

Preceding gene: 71908213

Following gene: 71908203

Centisome position: 62.02

GC content: 57.77

Gene sequence:

>573_bases
ATGCTACGAATTGATAGAGAAGCTGGGTTTCGTGCCAGGGAAGATCGCCTAAAGGATCTTCTGGTACGAAGTCTTGCCGG
CGATAACGCCGCCTATCAGGTGTTTTTGACAGAACTGAGTGCGCATCTGCGCGCCTTCTTGCGACGACGCCTTGTCCGCT
TGCCAGATGAAATCGAGGATCTCGTGCAGGAATCGCTCCTTGCCGTGCATAACCAGCGCCATACCTACGACTCCGCTCAG
CCTTTGTCGGCATGGGTGCAGGCCATCGCCCGCTACAAGCTGGTTGATCTGCTCCGGCGGCGGGCGGCGTATGACCTGTT
GAACGATCCACTGGATGAGGAAATGGAACTCTTCACCACCGCCGATTCGGATGCCGCCGAGGCGCGTCGGGATTTGAACA
AACTGTTGGCCGACTTGCCCGATCAGCTCCGCCTGCCGATTGTGCACACCAAGCTGGAAGGCTTGTCAGTCAAGGAGGCG
GCTGATCTGATCGGGATGTCGGAATCGGCCATCAAGGTTGGCGTCCATCGCGGCTTGAAAGCCCTCGCCGCCAAGATACG
AGGTGCACTATGA

Upstream 100 bases:

>100_bases
GTTCGGCCGAAGATGGCGAATGGTTACAAGCTCAGGCAAAATTTGTTTCCCCCACGACAGCGGCAAGTATTTTTTTCAAT
TGCTGTAACCAAAGGCGTCG

Downstream 100 bases:

>100_bases
AGACGGAAGACCTGATCACCATGTTGGCCACCGGGGCCGGTGCCATCGAGACACCCGCTGCCGCGCAACGCTACGCGATG
GCCATCGGCTGGGGCGCAGC

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-E Factor Protein; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Q Factor; Extracytoplasmic Function AlteRNAtive Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLRIDREAGFRAREDRLKDLLVRSLAGDNAAYQVFLTELSAHLRAFLRRRLVRLPDEIEDLVQESLLAVHNQRHTYDSAQ
PLSAWVQAIARYKLVDLLRRRAAYDLLNDPLDEEMELFTTADSDAAEARRDLNKLLADLPDQLRLPIVHTKLEGLSVKEA
ADLIGMSESAIKVGVHRGLKALAAKIRGAL

Sequences:

>Translated_190_residues
MLRIDREAGFRAREDRLKDLLVRSLAGDNAAYQVFLTELSAHLRAFLRRRLVRLPDEIEDLVQESLLAVHNQRHTYDSAQ
PLSAWVQAIARYKLVDLLRRRAAYDLLNDPLDEEMELFTTADSDAAEARRDLNKLLADLPDQLRLPIVHTKLEGLSVKEA
ADLIGMSESAIKVGVHRGLKALAAKIRGAL
>Mature_190_residues
MLRIDREAGFRAREDRLKDLLVRSLAGDNAAYQVFLTELSAHLRAFLRRRLVRLPDEIEDLVQESLLAVHNQRHTYDSAQ
PLSAWVQAIARYKLVDLLRRRAAYDLLNDPLDEEMELFTTADSDAAEARRDLNKLLADLPDQLRLPIVHTKLEGLSVKEA
ADLIGMSESAIKVGVHRGLKALAAKIRGAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21443; Mature: 21443

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIDREAGFRAREDRLKDLLVRSLAGDNAAYQVFLTELSAHLRAFLRRRLVRLPDEIED
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVQESLLAVHNQRHTYDSAQPLSAWVQAIARYKLVDLLRRRAAYDLLNDPLDEEMELFTT
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
ADSDAAEARRDLNKLLADLPDQLRLPIVHTKLEGLSVKEAADLIGMSESAIKVGVHRGLK
CCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
ALAAKIRGAL
HHHHHHHCCC
>Mature Secondary Structure
MLRIDREAGFRAREDRLKDLLVRSLAGDNAAYQVFLTELSAHLRAFLRRRLVRLPDEIED
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVQESLLAVHNQRHTYDSAQPLSAWVQAIARYKLVDLLRRRAAYDLLNDPLDEEMELFTT
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
ADSDAAEARRDLNKLLADLPDQLRLPIVHTKLEGLSVKEAADLIGMSESAIKVGVHRGLK
CCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
ALAAKIRGAL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA