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The map label for this gene is (cycA1 [H]

Identifier: 71908196

GI number: 71908196

Start: 2779175

End: 2779885

Strand: Reverse

Name: (cycA1 [H]

Synonym: Daro_2582

Alternate gene names: 71908196

Gene position: 2779885-2779175 (Counterclockwise)

Preceding gene: 71908197

Following gene: 71908195

Centisome position: 61.76

GC content: 52.88

Gene sequence:

>711_bases
ATGATAAAAATTCTTGCTCTCGCCACCCTACTTATTTCTGGTTTTCTTCCCGGTGTGACCGTGGCGCAACAAGCGGAATA
CCTCGGTTTTCGCGCATGCACCAAATGTCACGACTCCCAGGGTGAGACGTGGCGCGCTTCGGCCCATGCGAAAGCCTTCG
ATTCGCTGAAGCCGAACGCAAAATCAGAGGCGAAAACCAAAGCAAAACTGGATCCCAAAAAGGACTACACGCAGGACAAA
AACTGCGTGGGTTGCCACGTAACAGGTTACGGCGAACCGGGTGGATTTGTCTCAGGGGCTTCTCTGGACGACATGAAGAC
ACTAGTGGGCGTGACCTGCGAATCCTGCCACGGAGCAGGTGGAAAGTTCCGCAATCTCCATGGGGAAGCCAGCGACAGGC
TCAAGAACCAAGGCGAAACCAGCGAGCGGAAACAACTTGTGACCGCCGGGCAGAACTTCGATATGGAAAAGGCATGTGCT
CGTTGCCATCTCAATTTTGAAGGCTCTACGAAGCATGACGCGAAGGCACCGTTCACACCATTTTCTCCATCCGTCGGGTC
CAAGTATCAGTTCGATTTTCAGAAGTCAGTTATGACAACAGGTGCAGGCAATCCCATTCATACGCATTTCAAGCTGCGCG
GCGTATTCAAAGGCGATCCAGTGCCTGCTGTTCGCGCAAAACTTCAGGAAGATGCACCCGAGCCAGAATAG

Upstream 100 bases:

>100_bases
CAGCGCCGACATGATGATTTCTCCTTTGACCTGATGTTGCAGTGAAGCGGCCGCACGGGCCGCTTTTTCCTACCAGTCGT
TTCTATCGAGATTGCTCGCC

Downstream 100 bases:

>100_bases
CGATTAAAGGCACACGAGGACGTTTGAACAGTCTGGATGCCGATCAAGAAATGAGGAATCAAATGAATACCCTTAATGAC
GAAGCAGTTGTTGAAAGAAT

Product: cytochrome c-554 precursor

Products: NA

Alternate protein names: Cytochrome c554; Hydroxylamine oxidoreductase-linked cytochrome [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIKILALATLLISGFLPGVTVAQQAEYLGFRACTKCHDSQGETWRASAHAKAFDSLKPNAKSEAKTKAKLDPKKDYTQDK
NCVGCHVTGYGEPGGFVSGASLDDMKTLVGVTCESCHGAGGKFRNLHGEASDRLKNQGETSERKQLVTAGQNFDMEKACA
RCHLNFEGSTKHDAKAPFTPFSPSVGSKYQFDFQKSVMTTGAGNPIHTHFKLRGVFKGDPVPAVRAKLQEDAPEPE

Sequences:

>Translated_236_residues
MIKILALATLLISGFLPGVTVAQQAEYLGFRACTKCHDSQGETWRASAHAKAFDSLKPNAKSEAKTKAKLDPKKDYTQDK
NCVGCHVTGYGEPGGFVSGASLDDMKTLVGVTCESCHGAGGKFRNLHGEASDRLKNQGETSERKQLVTAGQNFDMEKACA
RCHLNFEGSTKHDAKAPFTPFSPSVGSKYQFDFQKSVMTTGAGNPIHTHFKLRGVFKGDPVPAVRAKLQEDAPEPE
>Mature_236_residues
MIKILALATLLISGFLPGVTVAQQAEYLGFRACTKCHDSQGETWRASAHAKAFDSLKPNAKSEAKTKAKLDPKKDYTQDK
NCVGCHVTGYGEPGGFVSGASLDDMKTLVGVTCESCHGAGGKFRNLHGEASDRLKNQGETSERKQLVTAGQNFDMEKACA
RCHLNFEGSTKHDAKAPFTPFSPSVGSKYQFDFQKSVMTTGAGNPIHTHFKLRGVFKGDPVPAVRAKLQEDAPEPE

Specific function: Involved in ammonia oxidation; accepts electrons directly from hydroxylamine oxidoreductase (HAO) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023155
- InterPro:   IPR011031 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25466; Mature: 25466

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKILALATLLISGFLPGVTVAQQAEYLGFRACTKCHDSQGETWRASAHAKAFDSLKPNA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCC
KSEAKTKAKLDPKKDYTQDKNCVGCHVTGYGEPGGFVSGASLDDMKTLVGVTCESCHGAG
CHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GKFRNLHGEASDRLKNQGETSERKQLVTAGQNFDMEKACARCHLNFEGSTKHDAKAPFTP
CCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCC
FSPSVGSKYQFDFQKSVMTTGAGNPIHTHFKLRGVFKGDPVPAVRAKLQEDAPEPE
CCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKILALATLLISGFLPGVTVAQQAEYLGFRACTKCHDSQGETWRASAHAKAFDSLKPNA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCC
KSEAKTKAKLDPKKDYTQDKNCVGCHVTGYGEPGGFVSGASLDDMKTLVGVTCESCHGAG
CHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GKFRNLHGEASDRLKNQGETSERKQLVTAGQNFDMEKACARCHLNFEGSTKHDAKAPFTP
CCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCC
FSPSVGSKYQFDFQKSVMTTGAGNPIHTHFKLRGVFKGDPVPAVRAKLQEDAPEPE
CCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063110; 8195067; 12700255; 9808046; 11372197 [H]