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The map label for this gene is nirB [H]

Identifier: 71908192

GI number: 71908192

Start: 2775833

End: 2776693

Strand: Reverse

Name: nirB [H]

Synonym: Daro_2578

Alternate gene names: 71908192

Gene position: 2776693-2775833 (Counterclockwise)

Preceding gene: 71908193

Following gene: 71908191

Centisome position: 61.69

GC content: 53.43

Gene sequence:

>861_bases
ATGAAAAAAAGTGCCATGTCAGTCGCCATTCTTGGTGCCGTATTTTCCCTTGGGTCTCAACTTGCTCACGCCGTTCCGGA
CTGGAGCAAGGTTCCCAAGAGAGATATTCAAGTGTTCCATCCTGGTGTAACTCCGATCGAATGGATTACTAAGAAATCTG
ATCACAGTGGCAGGACGGGACTGGTTAAAGGAGAAAGCTGTGTTGGCTGCCACGAAGAAAAGGGTGGGCTTAATTTTGAC
ATGAAGCGCTTGGCGGGGAAGGATCTGGAGCCGCTCGGCGCTCCAAAAACGATGAACTTCCCGGTCTCGGTGCAAGTTGC
ATACGACAAGGAATATGCCTATATCCGCCTAACCTTCAAGGCGCCTGCCGGAGCAGCCAATGCTGCCGACAAGGAGAATG
ATGTCAAGGTCGCTGTCATGTTTGCCAACGACAAAGTTGCGGCAGCCTCCGGTGACAAAACGATTCCGGGCGACCAGGTT
GGTTGTTGGGCGACCTGCCACGCCGATGCGCGCACGATGCCCGGGGCCGACGACAAAAAGACGAAGTACGTAAAGGATGG
CGCCTATGAATTGATGCAGTGGAAGAGTTCTAAGGGTGCCAAGGTCGTTGATGGTTCTGTGAGCGACAAGCGCAACATGG
AAGGCGGCATGGCCGGTGCAAAGGCTGAAGGTACCAAGGCGGGTGACATATATACCGTCACCTTTACGCGCAAGCTTTCG
GGCGCCTTGGCTGATGGCAAAGTAGTGCCATTTGGCGTTGCGGTTCATGCCGATCATTCAACGGGTCGCTTCCACCACGT
TTCGCTTGGTTACAAACTTGGCTTTGGCGCTGATGGCGATATCAAAGCCGTCAAACAGTAA

Upstream 100 bases:

>100_bases
GTATCGCCCACCGCAAACCGAAAGGTATGAAAGAGGAAGATGACGAGTGATCGTCGCCTATCGGTGACACCAATCATCGA
CAACCGTCTGGAGAAATTAA

Downstream 100 bases:

>100_bases
GCTTGATCGCGTCAGCAGTATTTAGGATGAAATTAAGATAAAAATTTTATGACCAATAGAAGGGAACTCTTAACATTTGG
CATTGGTTGCTCGTTCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKSAMSVAILGAVFSLGSQLAHAVPDWSKVPKRDIQVFHPGVTPIEWITKKSDHSGRTGLVKGESCVGCHEEKGGLNFD
MKRLAGKDLEPLGAPKTMNFPVSVQVAYDKEYAYIRLTFKAPAGAANAADKENDVKVAVMFANDKVAAASGDKTIPGDQV
GCWATCHADARTMPGADDKKTKYVKDGAYELMQWKSSKGAKVVDGSVSDKRNMEGGMAGAKAEGTKAGDIYTVTFTRKLS
GALADGKVVPFGVAVHADHSTGRFHHVSLGYKLGFGADGDIKAVKQ

Sequences:

>Translated_286_residues
MKKSAMSVAILGAVFSLGSQLAHAVPDWSKVPKRDIQVFHPGVTPIEWITKKSDHSGRTGLVKGESCVGCHEEKGGLNFD
MKRLAGKDLEPLGAPKTMNFPVSVQVAYDKEYAYIRLTFKAPAGAANAADKENDVKVAVMFANDKVAAASGDKTIPGDQV
GCWATCHADARTMPGADDKKTKYVKDGAYELMQWKSSKGAKVVDGSVSDKRNMEGGMAGAKAEGTKAGDIYTVTFTRKLS
GALADGKVVPFGVAVHADHSTGRFHHVSLGYKLGFGADGDIKAVKQ
>Mature_286_residues
MKKSAMSVAILGAVFSLGSQLAHAVPDWSKVPKRDIQVFHPGVTPIEWITKKSDHSGRTGLVKGESCVGCHEEKGGLNFD
MKRLAGKDLEPLGAPKTMNFPVSVQVAYDKEYAYIRLTFKAPAGAANAADKENDVKVAVMFANDKVAAASGDKTIPGDQV
GCWATCHADARTMPGADDKKTKYVKDGAYELMQWKSSKGAKVVDGSVSDKRNMEGGMAGAKAEGTKAGDIYTVTFTRKLS
GALADGKVVPFGVAVHADHSTGRFHHVSLGYKLGFGADGDIKAVKQ

Specific function: May play a role in nitrite reduction. Shows peroxidase activity on proteolytic modification [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019020
- InterPro:   IPR009056 [H]

Pfam domain/function: PF09459 EB_dh [H]

EC number: NA

Molecular weight: Translated: 30347; Mature: 30347

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSAMSVAILGAVFSLGSQLAHAVPDWSKVPKRDIQVFHPGVTPIEWITKKSDHSGRTG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHEECCCCCCCCEE
LVKGESCVGCHEEKGGLNFDMKRLAGKDLEPLGAPKTMNFPVSVQVAYDKEYAYIRLTFK
EEECCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCEECCCEEEEEEECCCEEEEEEEEE
APAGAANAADKENDVKVAVMFANDKVAAASGDKTIPGDQVGCWATCHADARTMPGADDKK
CCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
TKYVKDGAYELMQWKSSKGAKVVDGSVSDKRNMEGGMAGAKAEGTKAGDIYTVTFTRKLS
CEEHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
GALADGKVVPFGVAVHADHSTGRFHHVSLGYKLGFGADGDIKAVKQ
CCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKKSAMSVAILGAVFSLGSQLAHAVPDWSKVPKRDIQVFHPGVTPIEWITKKSDHSGRTG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHEECCCCCCCCEE
LVKGESCVGCHEEKGGLNFDMKRLAGKDLEPLGAPKTMNFPVSVQVAYDKEYAYIRLTFK
EEECCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCEECCCEEEEEEECCCEEEEEEEEE
APAGAANAADKENDVKVAVMFANDKVAAASGDKTIPGDQVGCWATCHADARTMPGADDKK
CCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
TKYVKDGAYELMQWKSSKGAKVVDGSVSDKRNMEGGMAGAKAEGTKAGDIYTVTFTRKLS
CEEHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
GALADGKVVPFGVAVHADHSTGRFHHVSLGYKLGFGADGDIKAVKQ
CCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2001732; 2539041 [H]