| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908181
Identifier: 71908181
GI number: 71908181
Start: 2764337
End: 2765290
Strand: Reverse
Name: 71908181
Synonym: Daro_2565
Alternate gene names: NA
Gene position: 2765290-2764337 (Counterclockwise)
Preceding gene: 71908182
Following gene: 71908180
Centisome position: 61.44
GC content: 62.26
Gene sequence:
>954_bases ATGCAGGTCATGCAAGACAGCCAGGAGGTCAGCAAGCACCACGAAAACGCATTGCAATCGGTTGAGATGCTGCGTGCCGT CATCGGCGGTGATACCTACGAGACGGTAGCCGTGCGCTTCGGTATCTCGCGTACGGCAGTTGAGCGGCGCATCAAGTCAG TCGCCATCCAACTCACCCAGGTAGTCGGCGTGGACGGTCTCAAGGAAGAAGGCGCCGCATTTGTGCGCCGGCTGCGCCTG CATCGCGAGGCCATCCTGGTCGCGCTGGCCGGATTCGTGCCGCTGCTGCCGGTTGGTACCCGCCCGGCGCGCGTATTGTC GGCGGCGGAGGTGGCCCAGGGCGCGGTGCGCATCAAGGGCCGCACCAGTCGCACCTGGCACGACCTTGCCCTGTACTACA TGCTGTTTGCCACTGGCCTGCGCCCTCTCGAAATCGCTCGGCTCGAGGTCCGCGACTACCTGCATGCCGACGGCAGTGTG TGCCGTGAATCGGAATTACGTGCCGAGGTGGCGATCAATGGCAAATTGAGGCCACTTTATTTCAGTAGTCGCCGGCTCGA TGACGCGCTGACGGCCTATTTCCGGGAGCGCTGCGATGGCGGGCACGGCGTCGGGGCGCCAGACTACTACCGAGGATTAC GTGCGGACAGCCGCTTGTTTCTGTCGCCTTGTGGCGAACCCTACCGAATCGCTTCAAACAACGGTGAGCCAGGCCAGAAT CGCTTTGTTTGCCGGGCACTCCTGGAGATCTATCGCAAGTTGTTCCGCTACGCTGAACTCAAGGGACTGAGCGCCCAGTC GGCACGTCTTACAGTGATGTCGCGGATGTATGAGCGAGGTGCCGACGAGGATCAGGTTGGTGCCATCCTGGGTATCGGCG AGCGCAGCGCGGTGCGGGAACTGCTACCCCGGCCGAAGCCGACACTGGCTGAACTGCTCGACGAACTGGTTTAA
Upstream 100 bases:
>100_bases CTGATGACGAAATCCCGCACCTTTCCCGGCGATTTCGCCTGGCAATGGGTGCGTCGACGCTTGAGTATTCGGAAAAATGT CGGTCGACATGTGATGGGAG
Downstream 100 bases:
>100_bases GTAAGGTCTGACCGCCATGGACCTCCAGCGCTTTGCCATCAAGGGCCGCGTAATCGGCGCCGATGATTCACAGTTGCAGG AAGCTTTGGCCCAGGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MQVMQDSQEVSKHHENALQSVEMLRAVIGGDTYETVAVRFGISRTAVERRIKSVAIQLTQVVGVDGLKEEGAAFVRRLRL HREAILVALAGFVPLLPVGTRPARVLSAAEVAQGAVRIKGRTSRTWHDLALYYMLFATGLRPLEIARLEVRDYLHADGSV CRESELRAEVAINGKLRPLYFSSRRLDDALTAYFRERCDGGHGVGAPDYYRGLRADSRLFLSPCGEPYRIASNNGEPGQN RFVCRALLEIYRKLFRYAELKGLSAQSARLTVMSRMYERGADEDQVGAILGIGERSAVRELLPRPKPTLAELLDELV
Sequences:
>Translated_317_residues MQVMQDSQEVSKHHENALQSVEMLRAVIGGDTYETVAVRFGISRTAVERRIKSVAIQLTQVVGVDGLKEEGAAFVRRLRL HREAILVALAGFVPLLPVGTRPARVLSAAEVAQGAVRIKGRTSRTWHDLALYYMLFATGLRPLEIARLEVRDYLHADGSV CRESELRAEVAINGKLRPLYFSSRRLDDALTAYFRERCDGGHGVGAPDYYRGLRADSRLFLSPCGEPYRIASNNGEPGQN RFVCRALLEIYRKLFRYAELKGLSAQSARLTVMSRMYERGADEDQVGAILGIGERSAVRELLPRPKPTLAELLDELV >Mature_317_residues MQVMQDSQEVSKHHENALQSVEMLRAVIGGDTYETVAVRFGISRTAVERRIKSVAIQLTQVVGVDGLKEEGAAFVRRLRL HREAILVALAGFVPLLPVGTRPARVLSAAEVAQGAVRIKGRTSRTWHDLALYYMLFATGLRPLEIARLEVRDYLHADGSV CRESELRAEVAINGKLRPLYFSSRRLDDALTAYFRERCDGGHGVGAPDYYRGLRADSRLFLSPCGEPYRIASNNGEPGQN RFVCRALLEIYRKLFRYAELKGLSAQSARLTVMSRMYERGADEDQVGAILGIGERSAVRELLPRPKPTLAELLDELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35354; Mature: 35354
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVMQDSQEVSKHHENALQSVEMLRAVIGGDTYETVAVRFGISRTAVERRIKSVAIQLTQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH VVGVDGLKEEGAAFVRRLRLHREAILVALAGFVPLLPVGTRPARVLSAAEVAQGAVRIKG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECC RTSRTWHDLALYYMLFATGLRPLEIARLEVRDYLHADGSVCRESELRAEVAINGKLRPLY CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCEEE FSSRRLDDALTAYFRERCDGGHGVGAPDYYRGLRADSRLFLSPCGEPYRIASNNGEPGQN ECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCHH RFVCRALLEIYRKLFRYAELKGLSAQSARLTVMSRMYERGADEDQVGAILGIGERSAVRE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHHHH LLPRPKPTLAELLDELV HCCCCCCHHHHHHHHHC >Mature Secondary Structure MQVMQDSQEVSKHHENALQSVEMLRAVIGGDTYETVAVRFGISRTAVERRIKSVAIQLTQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH VVGVDGLKEEGAAFVRRLRLHREAILVALAGFVPLLPVGTRPARVLSAAEVAQGAVRIKG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECC RTSRTWHDLALYYMLFATGLRPLEIARLEVRDYLHADGSVCRESELRAEVAINGKLRPLY CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCEEE FSSRRLDDALTAYFRERCDGGHGVGAPDYYRGLRADSRLFLSPCGEPYRIASNNGEPGQN ECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCHH RFVCRALLEIYRKLFRYAELKGLSAQSARLTVMSRMYERGADEDQVGAILGIGERSAVRE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHHHH LLPRPKPTLAELLDELV HCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA