| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908163
Identifier: 71908163
GI number: 71908163
Start: 2745438
End: 2746499
Strand: Reverse
Name: 71908163
Synonym: Daro_2547
Alternate gene names: NA
Gene position: 2746499-2745438 (Counterclockwise)
Preceding gene: 71908167
Following gene: 71908161
Centisome position: 61.02
GC content: 49.44
Gene sequence:
>1062_bases ATGACGATAAAACAATTGATGCAGCTTTGCTATGCACAGGGATTGGATGGTAAGCAAACGGATATTTGTGTGAAAGGTAT TGCAGTAAATCTGCTGTCACCAAAGATGCCTGTGACGGCCATCGACATGGACTCCCCGGAAGATTTGCTGCGGATGATGA AAGGCGCAGACTCAGCGCATATGTTTGTTGAAGGCGGTACTTGTCATTTCAATGCGCTTTATTCGGTCGCCGAGAATTTT CCGACGCCCAGAATTTACTTCATGAAATCGCACCTTCTCGATGAAATTGGTCGGTTGGGCCTCTTCCTTGAGCGCCATGG ATTCAAACTACCTGTTGTCAATACAGCAAAATTCTCGGAACTTATCGAAGATAGGGAGTACGCGAGCCGCTACCACCGTT GGCACGAAAGCTGGGAGGCCAAGAGCAAAGCGTTTCGGGGTCTTGTCGCCGGACGGGTCGAAAATACGGGGGTTGAAAAG GGCATGTGGCTTGCTACGGATGGTTGCTTGATATGCGGAGAGGAAACCGACTACATGTCGACGGGGACGCTTATCGGTGC AAGTGGTTTGATAATCGGACTCCGCTTGTGCAAGCAGCACGAGGATGAAGCCCGAGATCACGCATCGCTCATCGAATACA TCGCAAAGAGAATGGGCGTTCCCGCCCCGTTCTTCTCTAACATGAAACTCGTCAAACATACGAACGAGACATTGGCCATG TCTTGCCTTGCGGTTCAAAACGAGCTTGAGTGTGACATCGAGAAGGTCGACGAGAAGACAATTACTGCGGTTCGACGAAC CGGGTTTCGCATCATTCTCAGACAGGATGCACTGGATGATTATGCCTACATGATTCAAGATCCAAATGGAAAGCCAATCT CGCGGATTGACTCAGCCAATCACCATGCGGTCGAATATGGTCCCGACCATGTTCATCGGAACCTCAGCAAATCGAAAAAG AATCAGGTCGATTCAAGTTTCACTTATGGGTTTGTATTGGCTGACCTCAAAGCGATCAAGACGTTGGTTGAAGAAGCGGA GTCGCTCTCGAAGCCGCATTGA
Upstream 100 bases:
>100_bases ACGGTCATGCAAATTGAGTTATCAGCTTTCTTTTCAAGCCTTGTGGCGCCGGTAAGAGAAAGAAATTGGTCAACAACATA TAGGACTTCGGTTTCACCAA
Downstream 100 bases:
>100_bases TACCCAAAGAAAATCCCCACAGTCTTTCGACCGTGGGGGTAAGGTTAATCAAGCAGTTTGCCGCAGATCTTCGGTGTCGA TTTTCCCGATGCCCGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTIKQLMQLCYAQGLDGKQTDICVKGIAVNLLSPKMPVTAIDMDSPEDLLRMMKGADSAHMFVEGGTCHFNALYSVAENF PTPRIYFMKSHLLDEIGRLGLFLERHGFKLPVVNTAKFSELIEDREYASRYHRWHESWEAKSKAFRGLVAGRVENTGVEK GMWLATDGCLICGEETDYMSTGTLIGASGLIIGLRLCKQHEDEARDHASLIEYIAKRMGVPAPFFSNMKLVKHTNETLAM SCLAVQNELECDIEKVDEKTITAVRRTGFRIILRQDALDDYAYMIQDPNGKPISRIDSANHHAVEYGPDHVHRNLSKSKK NQVDSSFTYGFVLADLKAIKTLVEEAESLSKPH
Sequences:
>Translated_353_residues MTIKQLMQLCYAQGLDGKQTDICVKGIAVNLLSPKMPVTAIDMDSPEDLLRMMKGADSAHMFVEGGTCHFNALYSVAENF PTPRIYFMKSHLLDEIGRLGLFLERHGFKLPVVNTAKFSELIEDREYASRYHRWHESWEAKSKAFRGLVAGRVENTGVEK GMWLATDGCLICGEETDYMSTGTLIGASGLIIGLRLCKQHEDEARDHASLIEYIAKRMGVPAPFFSNMKLVKHTNETLAM SCLAVQNELECDIEKVDEKTITAVRRTGFRIILRQDALDDYAYMIQDPNGKPISRIDSANHHAVEYGPDHVHRNLSKSKK NQVDSSFTYGFVLADLKAIKTLVEEAESLSKPH >Mature_352_residues TIKQLMQLCYAQGLDGKQTDICVKGIAVNLLSPKMPVTAIDMDSPEDLLRMMKGADSAHMFVEGGTCHFNALYSVAENFP TPRIYFMKSHLLDEIGRLGLFLERHGFKLPVVNTAKFSELIEDREYASRYHRWHESWEAKSKAFRGLVAGRVENTGVEKG MWLATDGCLICGEETDYMSTGTLIGASGLIIGLRLCKQHEDEARDHASLIEYIAKRMGVPAPFFSNMKLVKHTNETLAMS CLAVQNELECDIEKVDEKTITAVRRTGFRIILRQDALDDYAYMIQDPNGKPISRIDSANHHAVEYGPDHVHRNLSKSKKN QVDSSFTYGFVLADLKAIKTLVEEAESLSKPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39633; Mature: 39502
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKQLMQLCYAQGLDGKQTDICVKGIAVNLLSPKMPVTAIDMDSPEDLLRMMKGADSAH CCHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCEEEECCCCHHHHHHHHHCCCCCE MFVEGGTCHFNALYSVAENFPTPRIYFMKSHLLDEIGRLGLFLERHGFKLPVVNTAKFSE EEEECCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LIEDREYASRYHRWHESWEAKSKAFRGLVAGRVENTGVEKGMWLATDGCLICGEETDYMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCC TGTLIGASGLIIGLRLCKQHEDEARDHASLIEYIAKRMGVPAPFFSNMKLVKHTNETLAM CCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCHHHHH SCLAVQNELECDIEKVDEKTITAVRRTGFRIILRQDALDDYAYMIQDPNGKPISRIDSAN HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEHHCCCCCEEEEECCCCCCHHHHCCCC HHAVEYGPDHVHRNLSKSKKNQVDSSFTYGFVLADLKAIKTLVEEAESLSKPH CCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TIKQLMQLCYAQGLDGKQTDICVKGIAVNLLSPKMPVTAIDMDSPEDLLRMMKGADSAH CHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCCCEEEECCCCHHHHHHHHHCCCCCE MFVEGGTCHFNALYSVAENFPTPRIYFMKSHLLDEIGRLGLFLERHGFKLPVVNTAKFSE EEEECCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LIEDREYASRYHRWHESWEAKSKAFRGLVAGRVENTGVEKGMWLATDGCLICGEETDYMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCC TGTLIGASGLIIGLRLCKQHEDEARDHASLIEYIAKRMGVPAPFFSNMKLVKHTNETLAM CCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCHHHHH SCLAVQNELECDIEKVDEKTITAVRRTGFRIILRQDALDDYAYMIQDPNGKPISRIDSAN HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEHHCCCCCEEEEECCCCCCHHHHCCCC HHAVEYGPDHVHRNLSKSKKNQVDSSFTYGFVLADLKAIKTLVEEAESLSKPH CCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA