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The map label for this gene is parB [H]

Identifier: 71908158

GI number: 71908158

Start: 2735695

End: 2737458

Strand: Reverse

Name: parB [H]

Synonym: Daro_2542

Alternate gene names: 71908158

Gene position: 2737458-2735695 (Counterclockwise)

Preceding gene: 71908159

Following gene: 71908157

Centisome position: 60.82

GC content: 65.76

Gene sequence:

>1764_bases
ATGGAAACACCCGCCACGCCCACTTTGCCGCTGCGCCTCATTGTTCAGGGCAAGAACCCCCGCGAATACTTCGATCCCAT
CGAAATGGCCGACCTCGAAGCTGGCCTACGCGCCGCCGGTCGCGTCGTCCAGCCCATCATCGTCCGTCCCATCCCCGGCA
CCGATCTGTTCGAAATCGTGGCCGGCGAGCGCCGCTGGCGGGCCGCGAAGAACGTCTTCGGCGACGACTACGACATGCCG
GTGGTGATCGAAGCCCTTAACGACGAGGAGGCCGAGGCCATCGCCGTCATCGAGAACCACCACCGCGCCCCCATGTCCCA
TGCCGAGGAAGCGCATGCCGCCAAGCGCCAGTTGCTGCGCCACAAGGGCGACAAGGAAGAGGCGGCGGCGAGCCTGGGCT
GGAAGCCCGAACTGCTGGAACGTCGACTGGCGCTGCTGACCTGCACGCCAGCCGTGCTCTCTGCGCTCACCTGCCGCCAG
ATTCAACTCGGCCACGCCGAACTGCTGGCTGGCGTCCCACCCGACAAGCAGGATGCGGTGCTGACCGGCGTCCTTGCGCA
CAAGGTACCGGTGGGCGTGCTGAAAGAGCAGTTGGGCCGCTTCGCCCGCCAGTTGTCGGCCGCCATCTTCGACACTGCCC
CATGTTCGGCCTGCCCGCACAATTCCGCCCGGCAGGCGGGGCTGTTCGATGAATCCCTCGGCGAAGGCTACTGCCAGCAC
CCCACCCACTATGACGAACTGACCCTGCTAGCCGTCGAGGCCAAGGCCCAAGGCCTGCGCGACCAGTATCCACTGGTCCA
CATCGTGAAGGCGACCGATGGCAGCGCCTATCTGCCGGTCGCGGTGGACGGCGAATTGGGTGTCGGCGCTGCGCAGTACA
CCGCCTGCCAAGGCTGCGCCTCGTTCGGTTGCGCGGTGTCGGCGCTGCCTGGCAGCTACGGCGACGTGACCCACGCGCAA
TGCTTCTACGCGGCCTGCCACACGGCGAAAGTGGCGGCTTGGCGTAAGGCGCAACGCGAGAGCGGGCAAGAAGCCCCTTC
AGGAACCGGCAAGACGCCGGCCAAGCGCAAGCCATCCGGCGCGGTGCATCCTGCTGCCACTGTTGCGCCGCCTTCGAACC
AGACCCCGCAACGGGTGAAGGACTACCGCGTTGCCCAATGGCGCAAATGGGCGGCGAGAGAACTGATGGCACAACCTGAG
CGCAACCGGCGCGTGATGATCGCGCTGGCCCGCGCCGGCCATACCGGCGATGTCCGCACCGCCGAGTTCGGACAGGTCGC
CCAGCGGATCGCCGGGCCGTGGGTAGTCGAGCGCCTCGACTTCGCCACCATGCTGCCCGAGGCCGAGGCCATCGACCCGC
AGCATCTGGAGCAGTTGATGTTGGCGGTCACCGCCTCGGCGGCCTTCGGCGTCGGTTTGCACGATCTGGAAGCCTTGCTC
AACTATATCGAGGTCGACGAGGGGCGCCACTTCAAATGGAGCACAGAGTTCCTCGAACTGTTCACCATCAGCGAGTTGGA
ATCCCTGGCCAGCGAGGTCGGCCTGAAAGCGAAGATGGGGGCGGCTTTCAAGCTGGCTCGGGCGAAGAAGAAGGGCGATT
TCATCAAATCGCTACTGGCCGTGCCGGGATTCGCCTACGAGGGTACCTTGCCCGTCGTCATGCAGTACCCGCGCCGCGCC
GTTTCAGCAGCGTCCATCGTTCAGGCAAACGACGACCTCGCGGTTTCAGCGGTCGAGTCTGCCGAAGAAGCCCTTGCTGC
CTGA

Upstream 100 bases:

>100_bases
GGTGCCCCGAGGGGGCGGGGGGCGTTTTTCGGTCCGGGCATGCCCTTGAAGGCCGCCCATCCCGCGAGAGCATGAAGGTA
TCCCACCGCAGGAGACCCTC

Downstream 100 bases:

>100_bases
GCGGCTCAGCCACTGGCAAACCCCCAATGCCTTCGTAGCATGGTCTCGAAGGCATTTCTTTTTTGAAGGAGCGTGACATG
ACGATGTTCAAAGAGCTTTA

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
METPATPTLPLRLIVQGKNPREYFDPIEMADLEAGLRAAGRVVQPIIVRPIPGTDLFEIVAGERRWRAAKNVFGDDYDMP
VVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLRHKGDKEEAAASLGWKPELLERRLALLTCTPAVLSALTCRQ
IQLGHAELLAGVPPDKQDAVLTGVLAHKVPVGVLKEQLGRFARQLSAAIFDTAPCSACPHNSARQAGLFDESLGEGYCQH
PTHYDELTLLAVEAKAQGLRDQYPLVHIVKATDGSAYLPVAVDGELGVGAAQYTACQGCASFGCAVSALPGSYGDVTHAQ
CFYAACHTAKVAAWRKAQRESGQEAPSGTGKTPAKRKPSGAVHPAATVAPPSNQTPQRVKDYRVAQWRKWAARELMAQPE
RNRRVMIALARAGHTGDVRTAEFGQVAQRIAGPWVVERLDFATMLPEAEAIDPQHLEQLMLAVTASAAFGVGLHDLEALL
NYIEVDEGRHFKWSTEFLELFTISELESLASEVGLKAKMGAAFKLARAKKKGDFIKSLLAVPGFAYEGTLPVVMQYPRRA
VSAASIVQANDDLAVSAVESAEEALAA

Sequences:

>Translated_587_residues
METPATPTLPLRLIVQGKNPREYFDPIEMADLEAGLRAAGRVVQPIIVRPIPGTDLFEIVAGERRWRAAKNVFGDDYDMP
VVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLRHKGDKEEAAASLGWKPELLERRLALLTCTPAVLSALTCRQ
IQLGHAELLAGVPPDKQDAVLTGVLAHKVPVGVLKEQLGRFARQLSAAIFDTAPCSACPHNSARQAGLFDESLGEGYCQH
PTHYDELTLLAVEAKAQGLRDQYPLVHIVKATDGSAYLPVAVDGELGVGAAQYTACQGCASFGCAVSALPGSYGDVTHAQ
CFYAACHTAKVAAWRKAQRESGQEAPSGTGKTPAKRKPSGAVHPAATVAPPSNQTPQRVKDYRVAQWRKWAARELMAQPE
RNRRVMIALARAGHTGDVRTAEFGQVAQRIAGPWVVERLDFATMLPEAEAIDPQHLEQLMLAVTASAAFGVGLHDLEALL
NYIEVDEGRHFKWSTEFLELFTISELESLASEVGLKAKMGAAFKLARAKKKGDFIKSLLAVPGFAYEGTLPVVMQYPRRA
VSAASIVQANDDLAVSAVESAEEALAA
>Mature_587_residues
METPATPTLPLRLIVQGKNPREYFDPIEMADLEAGLRAAGRVVQPIIVRPIPGTDLFEIVAGERRWRAAKNVFGDDYDMP
VVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLRHKGDKEEAAASLGWKPELLERRLALLTCTPAVLSALTCRQ
IQLGHAELLAGVPPDKQDAVLTGVLAHKVPVGVLKEQLGRFARQLSAAIFDTAPCSACPHNSARQAGLFDESLGEGYCQH
PTHYDELTLLAVEAKAQGLRDQYPLVHIVKATDGSAYLPVAVDGELGVGAAQYTACQGCASFGCAVSALPGSYGDVTHAQ
CFYAACHTAKVAAWRKAQRESGQEAPSGTGKTPAKRKPSGAVHPAATVAPPSNQTPQRVKDYRVAQWRKWAARELMAQPE
RNRRVMIALARAGHTGDVRTAEFGQVAQRIAGPWVVERLDFATMLPEAEAIDPQHLEQLMLAVTASAAFGVGLHDLEALL
NYIEVDEGRHFKWSTEFLELFTISELESLASEVGLKAKMGAAFKLARAKKKGDFIKSLLAVPGFAYEGTLPVVMQYPRRA
VSAASIVQANDDLAVSAVESAEEALAA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 63359; Mature: 63359

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPATPTLPLRLIVQGKNPREYFDPIEMADLEAGLRAAGRVVQPIIVRPIPGTDLFEIV
CCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH
AGERRWRAAKNVFGDDYDMPVVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLR
HCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHH
HKGDKEEAAASLGWKPELLERRLALLTCTPAVLSALTCRQIQLGHAELLAGVPPDKQDAV
CCCCHHHHHHHCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHH
LTGVLAHKVPVGVLKEQLGRFARQLSAAIFDTAPCSACPHNSARQAGLFDESLGEGYCQH
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHCCCCCCC
PTHYDELTLLAVEAKAQGLRDQYPLVHIVKATDGSAYLPVAVDGELGVGAAQYTACQGCA
CCCCCCEEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHH
SFGCAVSALPGSYGDVTHAQCFYAACHTAKVAAWRKAQRESGQEAPSGTGKTPAKRKPSG
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AVHPAATVAPPSNQTPQRVKDYRVAQWRKWAARELMAQPERNRRVMIALARAGHTGDVRT
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
AEFGQVAQRIAGPWVVERLDFATMLPEAEAIDPQHLEQLMLAVTASAAFGVGLHDLEALL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NYIEVDEGRHFKWSTEFLELFTISELESLASEVGLKAKMGAAFKLARAKKKGDFIKSLLA
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHH
VPGFAYEGTLPVVMQYPRRAVSAASIVQANDDLAVSAVESAEEALAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
METPATPTLPLRLIVQGKNPREYFDPIEMADLEAGLRAAGRVVQPIIVRPIPGTDLFEIV
CCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH
AGERRWRAAKNVFGDDYDMPVVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLR
HCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHH
HKGDKEEAAASLGWKPELLERRLALLTCTPAVLSALTCRQIQLGHAELLAGVPPDKQDAV
CCCCHHHHHHHCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHH
LTGVLAHKVPVGVLKEQLGRFARQLSAAIFDTAPCSACPHNSARQAGLFDESLGEGYCQH
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHCCCCCCC
PTHYDELTLLAVEAKAQGLRDQYPLVHIVKATDGSAYLPVAVDGELGVGAAQYTACQGCA
CCCCCCEEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHH
SFGCAVSALPGSYGDVTHAQCFYAACHTAKVAAWRKAQRESGQEAPSGTGKTPAKRKPSG
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AVHPAATVAPPSNQTPQRVKDYRVAQWRKWAARELMAQPERNRRVMIALARAGHTGDVRT
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
AEFGQVAQRIAGPWVVERLDFATMLPEAEAIDPQHLEQLMLAVTASAAFGVGLHDLEALL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NYIEVDEGRHFKWSTEFLELFTISELESLASEVGLKAKMGAAFKLARAKKKGDFIKSLLA
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHH
VPGFAYEGTLPVVMQYPRRAVSAASIVQANDDLAVSAVESAEEALAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]