Click here to switch to the map view.

The map label for this gene is yeiE [H]

Identifier: 71908112

GI number: 71908112

Start: 2694136

End: 2695014

Strand: Reverse

Name: yeiE [H]

Synonym: Daro_2495

Alternate gene names: 71908112

Gene position: 2695014-2694136 (Counterclockwise)

Preceding gene: 71908117

Following gene: 71908110

Centisome position: 59.87

GC content: 61.09

Gene sequence:

>879_bases
ATGAAAATTAGCCTGCGTCAGCTTGAGGTTTTTGCCGCTGTCGCCAGCCATGCTCAGGTGACACGGGCGGCACAGGCGGT
TGCCATGAGCCAAGCGGCGGCCAGCATGGCGCTGGCCGATCTGGAGGGGCAACTAGGCACGCCGCTGTTCAATCGACAGG
GGCGACAGTGGCAACTGACCGACAGCGGTCGGGAAATCCTGCCGCTGGCCCGCGAAGTGCTCGATCGGGTGGGCGATATC
GAAGCCGTCGCTCAGACCCGCGGGGCGGCTTTCGACATTCATCTCGGAGCCAGTGTGACCATCGGCAATCATCTGCTGCC
CGAACTGATCGTCGACTTGAACCGCCGCTATCCAGCCAGTCATATTCAAGTGTCGCGCCACAATACCGAACAGGTCGTGG
CGCGCTTGCTGACTTTTCAGATCGATCTCGGTTTCATCGAGGGGCCGGTCAATGATCCACATATCGCCTGTTTTCCGTGG
CGCCGGGATGAGTTGCAGGTGTTCGCGGCACCGGATCACCCTTTGGTCGATCGGCAAGTAAGCGTGGAAGACTTGCGTTC
AGTCGGTTGGGTCTGTCGGGAGTCCGGGTCCGGTACGCGCGAGCATTTCGACCGGGCCATGGCAGAGTCCAGTATTGCGC
CACGTATCGTGCTCGAACTCGAACAGCCGGAAGCCGTGCGCCAGTGCGTGCGCTTGGGCCTCGGGCTGGGCTGCCTTTCG
TTGCTCGAATTGCGCGATTCATTTCAGGCTGGTTGGCTGGTGCCGTTGGCGACGCCATTTCTTAACCTGTCGCGGCAGTT
GCGAATTGCGCTGCATGCCCAGAAGCATCGAACCCGCGGCATCCAGGCCGTGCTTGATCTCTGCCAGAGCGAGACGTGA

Upstream 100 bases:

>100_bases
GAACATGGCGAGCGCTTCCGGGAGGTGGTGCTGGAATGTTAGTGCTTGCTAATTCAATAAGTAAAACGTATATTTTTTAT
ACTTATAATCGGAATTTCTT

Downstream 100 bases:

>100_bases
ATGGCTGGCCGATTTTTGGCAAGAATGTGCCGCCCATCGAGTGCAAGCTCAGATATAAAGGCCCGTCCGGTCGGGCGACA
TGACGGTGTTGAGAAAGTCG

Product: regulatory protein, LysR:LysR, substrate-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKISLRQLEVFAAVASHAQVTRAAQAVAMSQAAASMALADLEGQLGTPLFNRQGRQWQLTDSGREILPLAREVLDRVGDI
EAVAQTRGAAFDIHLGASVTIGNHLLPELIVDLNRRYPASHIQVSRHNTEQVVARLLTFQIDLGFIEGPVNDPHIACFPW
RRDELQVFAAPDHPLVDRQVSVEDLRSVGWVCRESGSGTREHFDRAMAESSIAPRIVLELEQPEAVRQCVRLGLGLGCLS
LLELRDSFQAGWLVPLATPFLNLSRQLRIALHAQKHRTRGIQAVLDLCQSET

Sequences:

>Translated_292_residues
MKISLRQLEVFAAVASHAQVTRAAQAVAMSQAAASMALADLEGQLGTPLFNRQGRQWQLTDSGREILPLAREVLDRVGDI
EAVAQTRGAAFDIHLGASVTIGNHLLPELIVDLNRRYPASHIQVSRHNTEQVVARLLTFQIDLGFIEGPVNDPHIACFPW
RRDELQVFAAPDHPLVDRQVSVEDLRSVGWVCRESGSGTREHFDRAMAESSIAPRIVLELEQPEAVRQCVRLGLGLGCLS
LLELRDSFQAGWLVPLATPFLNLSRQLRIALHAQKHRTRGIQAVLDLCQSET
>Mature_292_residues
MKISLRQLEVFAAVASHAQVTRAAQAVAMSQAAASMALADLEGQLGTPLFNRQGRQWQLTDSGREILPLAREVLDRVGDI
EAVAQTRGAAFDIHLGASVTIGNHLLPELIVDLNRRYPASHIQVSRHNTEQVVARLLTFQIDLGFIEGPVNDPHIACFPW
RRDELQVFAAPDHPLVDRQVSVEDLRSVGWVCRESGSGTREHFDRAMAESSIAPRIVLELEQPEAVRQCVRLGLGLGCLS
LLELRDSFQAGWLVPLATPFLNLSRQLRIALHAQKHRTRGIQAVLDLCQSET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=288, Percent_Identity=41.3194444444444, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI157672245, Length=232, Percent_Identity=31.4655172413793, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787530, Length=250, Percent_Identity=28.4, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1788748, Length=301, Percent_Identity=27.5747508305648, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787806, Length=245, Percent_Identity=26.530612244898, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788296, Length=246, Percent_Identity=25.2032520325203, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081904, Length=209, Percent_Identity=29.1866028708134, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790399, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787879, Length=245, Percent_Identity=26.9387755102041, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI145693105, Length=268, Percent_Identity=23.5074626865672, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788887, Length=261, Percent_Identity=27.2030651340996, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786401, Length=175, Percent_Identity=25.7142857142857, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790208, Length=251, Percent_Identity=26.2948207171315, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082132, Length=262, Percent_Identity=22.5190839694656, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32287; Mature: 32287

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISLRQLEVFAAVASHAQVTRAAQAVAMSQAAASMALADLEGQLGTPLFNRQGRQWQLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEC
DSGREILPLAREVLDRVGDIEAVAQTRGAAFDIHLGASVTIGNHLLPELIVDLNRRYPAS
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCEEEECHHHHHHHHHHHHCCCCCC
HIQVSRHNTEQVVARLLTFQIDLGFIEGPVNDPHIACFPWRRDELQVFAAPDHPLVDRQV
CEEECCCCHHHHHHHHHHHHEECCEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCC
SVEDLRSVGWVCRESGSGTREHFDRAMAESSIAPRIVLELEQPEAVRQCVRLGLGLGCLS
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCHHHHH
LLELRDSFQAGWLVPLATPFLNLSRQLRIALHAQKHRTRGIQAVLDLCQSET
HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKISLRQLEVFAAVASHAQVTRAAQAVAMSQAAASMALADLEGQLGTPLFNRQGRQWQLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEC
DSGREILPLAREVLDRVGDIEAVAQTRGAAFDIHLGASVTIGNHLLPELIVDLNRRYPAS
CCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCEEEECHHHHHHHHHHHHCCCCCC
HIQVSRHNTEQVVARLLTFQIDLGFIEGPVNDPHIACFPWRRDELQVFAAPDHPLVDRQV
CEEECCCCHHHHHHHHHHHHEECCEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCC
SVEDLRSVGWVCRESGSGTREHFDRAMAESSIAPRIVLELEQPEAVRQCVRLGLGLGCLS
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCHHHHH
LLELRDSFQAGWLVPLATPFLNLSRQLRIALHAQKHRTRGIQAVLDLCQSET
HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]