| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71908049
Identifier: 71908049
GI number: 71908049
Start: 2627734
End: 2628564
Strand: Reverse
Name: 71908049
Synonym: Daro_2431
Alternate gene names: NA
Gene position: 2628564-2627734 (Counterclockwise)
Preceding gene: 71908050
Following gene: 71908048
Centisome position: 58.4
GC content: 50.18
Gene sequence:
>831_bases TTGGTTAGAGGGGTAATGGCCTTGCAGCCATTCTTTCTCAAGGCTGAAAAAGGGCAGCGTTTTTGTATTTATCACCCTGC CGAGGCTAGTGGAGCGCGAGGGGCTGTCATTTATCTGCATCCATTTGCCGAGGAGCTAAACAAATCCAGGCGCATGGCTG CATGCCAAGCGCGGGAAATGGCCAAACTTGGATTTGATGTACTTCAAATTGATTTGTTAGGGTGTGGAGATAGCAGCGGA GACTATGCCGATGCCACCTGGAACGCATGGCAGGACGATGTTCTTCTTGCTTATCGCTGGTTGCGTGCTCGAAGTGAAGC GCCGCTAACACTGTGGGGGTTACGCTCAGGATGTTTACTTGCAGCAAGCGCTGCAGTTAATTTGCCGGAAAAAGCCAATT TTGTCTTCTGGCAGCCCGTTGTTTCGGGCAAGCAGTATTGGCAACAATTCATGCGTTTGAAATTGGTCTCTGAGATAACT TCAGGGCAATCCAAAAGCGCTTCGGAGGAAATCCGAAAGCAATTGATCGCGGGGACGCCTGTCGAGATTGCGGGTTATAC GGTTGCTCCTGCCTTAGTTAATGACTTCGAGCAATCTCAACTTAACCCTGCTCAGTATTGCAATGGTCGAGTCGCGTGGC TTGAGCTTTCGATGCGAGAAGGCGCAACGCTCTCTCCGGTATTTGTCAGACTTGCTGAACAATGGCAACAGTCCGGCTAT GAAGTGGATCTTCGCCTGGTTCGTGGCCCTGCTTTTTGGCAAACATCAGAAATCGAGGAAGCTCCGGAATTGATTTCATC AACCATCGCGTTAATGGAGTCATGGGGATGA
Upstream 100 bases:
>100_bases CCCTCATGAATGAAACTCTTTGCTTCAATCGGGCGGTAGCGGAGCTTAATCAGGTATTCCGTATGTTGGACTATTTCCGC CTTCGGGCTCGTTTCGCCGA
Downstream 100 bases:
>100_bases GTTGCACTGAACGTGCCTTCACTTTTTCGTGTAGTGGTGAAGCGCTACTTGCAATTCTTGCCGAGCCGGAAGCATCCGGA CAAACGGGGGTTCTGATCGT
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Esterase/Lipase/Thioesterase
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MVRGVMALQPFFLKAEKGQRFCIYHPAEASGARGAVIYLHPFAEELNKSRRMAACQAREMAKLGFDVLQIDLLGCGDSSG DYADATWNAWQDDVLLAYRWLRARSEAPLTLWGLRSGCLLAASAAVNLPEKANFVFWQPVVSGKQYWQQFMRLKLVSEIT SGQSKSASEEIRKQLIAGTPVEIAGYTVAPALVNDFEQSQLNPAQYCNGRVAWLELSMREGATLSPVFVRLAEQWQQSGY EVDLRLVRGPAFWQTSEIEEAPELISSTIALMESWG
Sequences:
>Translated_276_residues MVRGVMALQPFFLKAEKGQRFCIYHPAEASGARGAVIYLHPFAEELNKSRRMAACQAREMAKLGFDVLQIDLLGCGDSSG DYADATWNAWQDDVLLAYRWLRARSEAPLTLWGLRSGCLLAASAAVNLPEKANFVFWQPVVSGKQYWQQFMRLKLVSEIT SGQSKSASEEIRKQLIAGTPVEIAGYTVAPALVNDFEQSQLNPAQYCNGRVAWLELSMREGATLSPVFVRLAEQWQQSGY EVDLRLVRGPAFWQTSEIEEAPELISSTIALMESWG >Mature_276_residues MVRGVMALQPFFLKAEKGQRFCIYHPAEASGARGAVIYLHPFAEELNKSRRMAACQAREMAKLGFDVLQIDLLGCGDSSG DYADATWNAWQDDVLLAYRWLRARSEAPLTLWGLRSGCLLAASAAVNLPEKANFVFWQPVVSGKQYWQQFMRLKLVSEIT SGQSKSASEEIRKQLIAGTPVEIAGYTVAPALVNDFEQSQLNPAQYCNGRVAWLELSMREGATLSPVFVRLAEQWQQSGY EVDLRLVRGPAFWQTSEIEEAPELISSTIALMESWG
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30788; Mature: 30788
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGVMALQPFFLKAEKGQRFCIYHPAEASGARGAVIYLHPFAEELNKSRRMAACQAREM CCCCHHHHCHHEEEECCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH AKLGFDVLQIDLLGCGDSSGDYADATWNAWQDDVLLAYRWLRARSEAPLTLWGLRSGCLL HHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHE AASAAVNLPEKANFVFWQPVVSGKQYWQQFMRLKLVSEITSGQSKSASEEIRKQLIAGTP EHHHHCCCCCCCCEEEECHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC VEIAGYTVAPALVNDFEQSQLNPAQYCNGRVAWLELSMREGATLSPVFVRLAEQWQQSGY EEECCEEEHHHHHHHHHHHCCCHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC EVDLRLVRGPAFWQTSEIEEAPELISSTIALMESWG EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVRGVMALQPFFLKAEKGQRFCIYHPAEASGARGAVIYLHPFAEELNKSRRMAACQAREM CCCCHHHHCHHEEEECCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH AKLGFDVLQIDLLGCGDSSGDYADATWNAWQDDVLLAYRWLRARSEAPLTLWGLRSGCLL HHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHE AASAAVNLPEKANFVFWQPVVSGKQYWQQFMRLKLVSEITSGQSKSASEEIRKQLIAGTP EHHHHCCCCCCCCEEEECHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC VEIAGYTVAPALVNDFEQSQLNPAQYCNGRVAWLELSMREGATLSPVFVRLAEQWQQSGY EEECCEEEHHHHHHHHHHHCCCHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC EVDLRLVRGPAFWQTSEIEEAPELISSTIALMESWG EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA