Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71908042

Identifier: 71908042

GI number: 71908042

Start: 2617085

End: 2618578

Strand: Reverse

Name: 71908042

Synonym: Daro_2423

Alternate gene names: NA

Gene position: 2618578-2617085 (Counterclockwise)

Preceding gene: 71908045

Following gene: 71908040

Centisome position: 58.18

GC content: 49.4

Gene sequence:

>1494_bases
ATGAAAGTTTCTCGTTTAGCTGACCGCAATAAATCCATGAAAAATTCATCCTGGATAGGAAAGAGGGCGAGAAAGGCGGC
ATCCCTCTCTCTGGTAATGATTTGCTTGAACAGTACTTCAGCTACTGCAGCGGTCGATCTGAGCTATCTTCAAGGGTTAC
TGGCTTCAACTCCTGAAGGTGGCTGGGTTCAGGTTAATACCAACAAGTTTTCCGATGCGTGGGCCTCGACTCAAGCCGGA
GGTGTTCCAGGCTCGGATCCAGCAGCCATAGTCCATGCTTGGAGTTCCGTTGCATGGGATTCTACCCGTGGTGACCTGCT
TCTATTTGGGGGGGGGCACGCTAACTACGCAGGTAATGAAATGTACGTTTGGCAGGGGTCTGATGGCGCCTGGACCCGAG
GTTCCCTGCCTAGTCGAATGGAAAGATATGGTTCAACGGCCACGTTCTTCACCGTAGATAATGCTGCTCCGCAGTCTGCG
CATACGTATGACAACAATATATATGTGCCAATAAACGACATGTTTGTCACGTTTGGCGGTGCAGCCTACAATTCTGGTGC
TGGCTTCGTCGTTAAAGGGCCTGATGGCAATCCTCTGCCTGCAGGTCCTTGGATGTGGGATCCACAAAAAGCTGATCCGA
ATAAGGTTGGAGGAACGGATGGCTCTGGATACCTCCCATCGACGCTTGGCGGAATGATGTGGAGCAACCAATACGGCAAG
TGGGTCGGAGACCCTGGCTCAACGTATTTGGAAGGTTCTACTGCCTATCGCCAAGAGAATGGTCATGATGTTATTTACGT
AACCGGCGCAGGTGGTGGTGGTTGGCCTTCCTTGTTCAGGTATGAGTTAGGCAACGTTCGGGCCGGTGAACTTGGAAGTT
TTGAGAAGGTTGCTGTTGCATGGAATGCTCCAAGCTTCCAAGGAACATCCACAATTGCAAATAACCTCTTTATAAGAACG
TCGAGCGTACCAGGATTTCAAATGGGTTTTGGCGTATGGGATCTTTCCAAGTCCAATGCGAGCAATCCAGATGGCAATCG
TGATATCGCCATCTATCTTGTGAATGAAGACGGAACCCCTTTCATGATGAACGTTGATTACGGCATCGATTTTGATAGCG
TCAACGGAAAGATTCTGATGTGGGATGGCCGTGATAAAGGGACAGTCTGGGAAACCGAGGCGGTATACGACAGTTTGGGA
AATTTGGTTACGACGTGGGTTGTGAAAAAGCGCGTGAGTTCCACTGTGCAGCAACCTACCGGAAATTTTCAAACAGGGGT
GCTCGGAAAGTGGGATTTCGTTGAGCAATTAGGCGCATTTATAGCGCTGGATGAGTTTACTTCGGCTACGCAAGATGCCG
GGGTCTGGCTATATAAACCATTTTCCGATGTCCAAGAACCTCCTTCGGGAGACTTGCCTGAGCCGGCCACACTAGCATTG
AATATTTTTGCATTGCTGATACTGTTTTGGCGGTTTAGATTGAAGTTGGGCTAA

Upstream 100 bases:

>100_bases
TGTTAATAAATTCAATTGCTTGCAGAATGAATTTTTCTGTGGATTGATTTTTGCTTTAAGAATCAAATACATTTTGGTTC
GGAAAGAATTGGAGCGCATG

Downstream 100 bases:

>100_bases
AGACGGGGGAGAGCGGGCTTAATGTTCCATAGGTTCTTGAATTTCGTTTTCTCTTTCTGATTTAATCGGCTCAGAAATAT
GTTGGTCTGGGGGAGAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKVSRLADRNKSMKNSSWIGKRARKAASLSLVMICLNSTSATAAVDLSYLQGLLASTPEGGWVQVNTNKFSDAWASTQAG
GVPGSDPAAIVHAWSSVAWDSTRGDLLLFGGGHANYAGNEMYVWQGSDGAWTRGSLPSRMERYGSTATFFTVDNAAPQSA
HTYDNNIYVPINDMFVTFGGAAYNSGAGFVVKGPDGNPLPAGPWMWDPQKADPNKVGGTDGSGYLPSTLGGMMWSNQYGK
WVGDPGSTYLEGSTAYRQENGHDVIYVTGAGGGGWPSLFRYELGNVRAGELGSFEKVAVAWNAPSFQGTSTIANNLFIRT
SSVPGFQMGFGVWDLSKSNASNPDGNRDIAIYLVNEDGTPFMMNVDYGIDFDSVNGKILMWDGRDKGTVWETEAVYDSLG
NLVTTWVVKKRVSSTVQQPTGNFQTGVLGKWDFVEQLGAFIALDEFTSATQDAGVWLYKPFSDVQEPPSGDLPEPATLAL
NIFALLILFWRFRLKLG

Sequences:

>Translated_497_residues
MKVSRLADRNKSMKNSSWIGKRARKAASLSLVMICLNSTSATAAVDLSYLQGLLASTPEGGWVQVNTNKFSDAWASTQAG
GVPGSDPAAIVHAWSSVAWDSTRGDLLLFGGGHANYAGNEMYVWQGSDGAWTRGSLPSRMERYGSTATFFTVDNAAPQSA
HTYDNNIYVPINDMFVTFGGAAYNSGAGFVVKGPDGNPLPAGPWMWDPQKADPNKVGGTDGSGYLPSTLGGMMWSNQYGK
WVGDPGSTYLEGSTAYRQENGHDVIYVTGAGGGGWPSLFRYELGNVRAGELGSFEKVAVAWNAPSFQGTSTIANNLFIRT
SSVPGFQMGFGVWDLSKSNASNPDGNRDIAIYLVNEDGTPFMMNVDYGIDFDSVNGKILMWDGRDKGTVWETEAVYDSLG
NLVTTWVVKKRVSSTVQQPTGNFQTGVLGKWDFVEQLGAFIALDEFTSATQDAGVWLYKPFSDVQEPPSGDLPEPATLAL
NIFALLILFWRFRLKLG
>Mature_497_residues
MKVSRLADRNKSMKNSSWIGKRARKAASLSLVMICLNSTSATAAVDLSYLQGLLASTPEGGWVQVNTNKFSDAWASTQAG
GVPGSDPAAIVHAWSSVAWDSTRGDLLLFGGGHANYAGNEMYVWQGSDGAWTRGSLPSRMERYGSTATFFTVDNAAPQSA
HTYDNNIYVPINDMFVTFGGAAYNSGAGFVVKGPDGNPLPAGPWMWDPQKADPNKVGGTDGSGYLPSTLGGMMWSNQYGK
WVGDPGSTYLEGSTAYRQENGHDVIYVTGAGGGGWPSLFRYELGNVRAGELGSFEKVAVAWNAPSFQGTSTIANNLFIRT
SSVPGFQMGFGVWDLSKSNASNPDGNRDIAIYLVNEDGTPFMMNVDYGIDFDSVNGKILMWDGRDKGTVWETEAVYDSLG
NLVTTWVVKKRVSSTVQQPTGNFQTGVLGKWDFVEQLGAFIALDEFTSATQDAGVWLYKPFSDVQEPPSGDLPEPATLAL
NIFALLILFWRFRLKLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53622; Mature: 53622

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSRLADRNKSMKNSSWIGKRARKAASLSLVMICLNSTSATAAVDLSYLQGLLASTPEG
CCCHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCHHEEEHHHHHHHHHCCCCC
GWVQVNTNKFSDAWASTQAGGVPGSDPAAIVHAWSSVAWDSTRGDLLLFGGGHANYAGNE
CEEEEECCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCE
MYVWQGSDGAWTRGSLPSRMERYGSTATFFTVDNAAPQSAHTYDNNIYVPINDMFVTFGG
EEEEECCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEECC
AAYNSGAGFVVKGPDGNPLPAGPWMWDPQKADPNKVGGTDGSGYLPSTLGGMMWSNQYGK
CEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
WVGDPGSTYLEGSTAYRQENGHDVIYVTGAGGGGWPSLFRYELGNVRAGELGSFEKVAVA
EECCCCCCEECCCHHEECCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
WNAPSFQGTSTIANNLFIRTSSVPGFQMGFGVWDLSKSNASNPDGNRDIAIYLVNEDGTP
ECCCCCCCCHHHHCEEEEEECCCCCEECCCEEEECCCCCCCCCCCCCEEEEEEECCCCCE
FMMNVDYGIDFDSVNGKILMWDGRDKGTVWETEAVYDSLGNLVTTWVVKKRVSSTVQQPT
EEEEECCCCEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNFQTGVLGKWDFVEQLGAFIALDEFTSATQDAGVWLYKPFSDVQEPPSGDLPEPATLAL
CCCCCCCCCCHHHHHHHHHEEEEHHHHCCCCCCCEEEECCHHHHCCCCCCCCCCCHHHHH
NIFALLILFWRFRLKLG
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVSRLADRNKSMKNSSWIGKRARKAASLSLVMICLNSTSATAAVDLSYLQGLLASTPEG
CCCHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCHHEEEHHHHHHHHHCCCCC
GWVQVNTNKFSDAWASTQAGGVPGSDPAAIVHAWSSVAWDSTRGDLLLFGGGHANYAGNE
CEEEEECCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCE
MYVWQGSDGAWTRGSLPSRMERYGSTATFFTVDNAAPQSAHTYDNNIYVPINDMFVTFGG
EEEEECCCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEECC
AAYNSGAGFVVKGPDGNPLPAGPWMWDPQKADPNKVGGTDGSGYLPSTLGGMMWSNQYGK
CEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
WVGDPGSTYLEGSTAYRQENGHDVIYVTGAGGGGWPSLFRYELGNVRAGELGSFEKVAVA
EECCCCCCEECCCHHEECCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
WNAPSFQGTSTIANNLFIRTSSVPGFQMGFGVWDLSKSNASNPDGNRDIAIYLVNEDGTP
ECCCCCCCCHHHHCEEEEEECCCCCEECCCEEEECCCCCCCCCCCCCEEEEEEECCCCCE
FMMNVDYGIDFDSVNGKILMWDGRDKGTVWETEAVYDSLGNLVTTWVVKKRVSSTVQQPT
EEEEECCCCEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNFQTGVLGKWDFVEQLGAFIALDEFTSATQDAGVWLYKPFSDVQEPPSGDLPEPATLAL
CCCCCCCCCCHHHHHHHHHEEEEHHHHCCCCCCCEEEECCHHHHCCCCCCCCCCCHHHHH
NIFALLILFWRFRLKLG
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA