| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908002
Identifier: 71908002
GI number: 71908002
Start: 2568851
End: 2569927
Strand: Reverse
Name: 71908002
Synonym: Daro_2383
Alternate gene names: NA
Gene position: 2569927-2568851 (Counterclockwise)
Preceding gene: 71908003
Following gene: 71908001
Centisome position: 57.1
GC content: 62.58
Gene sequence:
>1077_bases ATGCTGGCGTTGCGTGGCTGGGGTTCGCCATTGGCGGTGGCGCATCTGGCGTTTGCCGTCGGCATCGTGCCGCTGATCTT TGCGGCGATGATGCATTTTGTGCCGGTGCTGACGCGTACCGGTGATCCCGGTGAGCGTTTGGGGCGCTTGCCGATGGCAG CACAGGCCACTGGTTTGATCGCTGTTGGCGGGATGCAGGGCTGGTTGCCCTATCCACTGGTTTATCTGGCGGCTGCGCTT GATCTTACCCTGGCAGCCATTCTGCTTAACTGGATTGCCCTGCGAGCCCGATCAACGCTTGGTTCGCCACATCCGGGCTG GCGCTGGTACGGTACAGCGCTGGGTTGTCTGCTGCTGGCTTTGCTGGCCATTCTGCTTATTCCGGTTTGGCCATCCTATT GGCGAAGCCTGCGAGTTTTTCATTTGCATCTCAATACGTTAGGGCTGGTTGGATTGTCGGCCTTGGGTACCTTGCCGGTC CTTTTGCCGACGGCGCTCGGCAAGCCCGACCCGGAAGCCGCTGGCTGGTTACAGCGGCGCTTATGGCTGGTTGCTTCCGG TGCGCTGGTGATAGCGACCGGGGCAGTCATTGCGTGGCCATTTGCCGCGCCGGGAACAGCGCTTCTTGTCGTCGCGGCGC TCGGGCTGGCCGGGCAATGGGTGCGCCGCTTCGGGGTGTGGAGCCTGCTTCAGGATGGTGTAGCTGCTTCATTGCTGGCG GCGGTCGTCGGCTTGCTGGTCACTTTGGTCGCCGGGTTGCTGCATGGTGCCGGAATATTACCGACTCGCCCGTCTTTGCT GGCTTGGGGGGCCGGGTTTTTGTTGCCCTTGGTGACTGGTGCGCTCAGTCAGTTGCTGCCAGTATGGCGCTGGCCGGGGC CGACGATTCCAGCCCGCAACCTGATGCGCCAGAAGCTGGCGGCAAGCGGTGCTTGGCGCGGCTTGTTGTTCCTCGCCTCA GCGATGGCTTTGCTCTCCGGTCGTGAACGCTTGGGCGGGGCTTTGGTGGCCTGCGGATTGGCACTCTTTATCGTTGCGCT CGTCCAAGCCGTGCGCATGCATCGCTCGACGCGGTAA
Upstream 100 bases:
>100_bases CAAGCAGCGTGAGCCAGGTGCCATCGTGATCGACTTTACCGTCGTCGGCTGAGTGATACCCACCGCGAGCCTCAGCCTGT TTTCATTGATCGCCAGCGCC
Downstream 100 bases:
>100_bases AATCGCAGTTTTTCGCTTTTCAGGTTTCCGCCATGCGCTATCTCTCGACCCGCGGTCACGCCGCGCCCCAGGCTTTCTGC GACATTCTCCTTGGTGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLALRGWGSPLAVAHLAFAVGIVPLIFAAMMHFVPVLTRTGDPGERLGRLPMAAQATGLIAVGGMQGWLPYPLVYLAAAL DLTLAAILLNWIALRARSTLGSPHPGWRWYGTALGCLLLALLAILLIPVWPSYWRSLRVFHLHLNTLGLVGLSALGTLPV LLPTALGKPDPEAAGWLQRRLWLVASGALVIATGAVIAWPFAAPGTALLVVAALGLAGQWVRRFGVWSLLQDGVAASLLA AVVGLLVTLVAGLLHGAGILPTRPSLLAWGAGFLLPLVTGALSQLLPVWRWPGPTIPARNLMRQKLAASGAWRGLLFLAS AMALLSGRERLGGALVACGLALFIVALVQAVRMHRSTR
Sequences:
>Translated_358_residues MLALRGWGSPLAVAHLAFAVGIVPLIFAAMMHFVPVLTRTGDPGERLGRLPMAAQATGLIAVGGMQGWLPYPLVYLAAAL DLTLAAILLNWIALRARSTLGSPHPGWRWYGTALGCLLLALLAILLIPVWPSYWRSLRVFHLHLNTLGLVGLSALGTLPV LLPTALGKPDPEAAGWLQRRLWLVASGALVIATGAVIAWPFAAPGTALLVVAALGLAGQWVRRFGVWSLLQDGVAASLLA AVVGLLVTLVAGLLHGAGILPTRPSLLAWGAGFLLPLVTGALSQLLPVWRWPGPTIPARNLMRQKLAASGAWRGLLFLAS AMALLSGRERLGGALVACGLALFIVALVQAVRMHRSTR >Mature_358_residues MLALRGWGSPLAVAHLAFAVGIVPLIFAAMMHFVPVLTRTGDPGERLGRLPMAAQATGLIAVGGMQGWLPYPLVYLAAAL DLTLAAILLNWIALRARSTLGSPHPGWRWYGTALGCLLLALLAILLIPVWPSYWRSLRVFHLHLNTLGLVGLSALGTLPV LLPTALGKPDPEAAGWLQRRLWLVASGALVIATGAVIAWPFAAPGTALLVVAALGLAGQWVRRFGVWSLLQDGVAASLLA AVVGLLVTLVAGLLHGAGILPTRPSLLAWGAGFLLPLVTGALSQLLPVWRWPGPTIPARNLMRQKLAASGAWRGLLFLAS AMALLSGRERLGGALVACGLALFIVALVQAVRMHRSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37676; Mature: 37676
Theoretical pI: Translated: 12.31; Mature: 12.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALRGWGSPLAVAHLAFAVGIVPLIFAAMMHFVPVLTRTGDPGERLGRLPMAAQATGLI CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHCCEE AVGGMQGWLPYPLVYLAAALDLTLAAILLNWIALRARSTLGSPHPGWRWYGTALGCLLLA EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LLAILLIPVWPSYWRSLRVFHLHLNTLGLVGLSALGTLPVLLPTALGKPDPEAAGWLQRR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LWLVASGALVIATGAVIAWPFAAPGTALLVVAALGLAGQWVRRFGVWSLLQDGVAASLLA HHHHHCCCHHEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVGLLVTLVAGLLHGAGILPTRPSLLAWGAGFLLPLVTGALSQLLPVWRWPGPTIPARN HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LMRQKLAASGAWRGLLFLASAMALLSGRERLGGALVACGLALFIVALVQAVRMHRSTR HHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLALRGWGSPLAVAHLAFAVGIVPLIFAAMMHFVPVLTRTGDPGERLGRLPMAAQATGLI CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHCCEE AVGGMQGWLPYPLVYLAAALDLTLAAILLNWIALRARSTLGSPHPGWRWYGTALGCLLLA EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LLAILLIPVWPSYWRSLRVFHLHLNTLGLVGLSALGTLPVLLPTALGKPDPEAAGWLQRR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LWLVASGALVIATGAVIAWPFAAPGTALLVVAALGLAGQWVRRFGVWSLLQDGVAASLLA HHHHHCCCHHEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVGLLVTLVAGLLHGAGILPTRPSLLAWGAGFLLPLVTGALSQLLPVWRWPGPTIPARN HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LMRQKLAASGAWRGLLFLASAMALLSGRERLGGALVACGLALFIVALVQAVRMHRSTR HHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA