| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907906
Identifier: 71907906
GI number: 71907906
Start: 2469628
End: 2470398
Strand: Reverse
Name: 71907906
Synonym: Daro_2286
Alternate gene names: NA
Gene position: 2470398-2469628 (Counterclockwise)
Preceding gene: 71907913
Following gene: 71907903
Centisome position: 54.88
GC content: 63.16
Gene sequence:
>771_bases ATGTCGGAGATCCAGATCGTCAAGGTAGACCAGGGGGCCGTCAACGCCCGCATTCTCGCCAAGGAGGCCAAGGCCGACTT CCGACGCGTCGAGGCGGCCAGCCTGAAGATGCCGACGCGCTTCACCAGCGCCGAGGGCAAGCGCTTCTTCGCGCGGCTGT TCAACACGCTGCAACTCAACACCCACTTCATCTCGGTGATCGCCCGCACGCGGCTCGACCACGAGGACGTGGCCAAGGTC GAGGAGGCCATTCGAGCCCAGATGGACACCGTGACCGAGAACCTCAATAAAGCCATCGATGGTGCCGAAGCGCTATTCAA GGTCCATGGCATCACCAGCACGGCGACCTACGACACCGTGCCGCTCGATGTGGACGTCCATGTGTTGTCGTCCATCGGTC GACGCTTCCTGGAGGTGCTGGGCAAACTCGACCAACTGATGCCCTTGCTGCAGACCCTGGAGATTCACGAGGTGATTACC ACCCAGGCTGTCGACATCCAGCGCGCGGGTCTTAAACGGCAGGTGCGCGATGTCGCCAACGGTGCGCGAAACTTTGCGAT GGGGTTGCGGCGGCGGATGAATGCTCTGGACGCGCACGATGTCGAAGACCGCAGCGGGCCAAATCGGCAAGAGGCCGAAG CCGTGGGTGCACCGGATGGCGCGGACGAACCCGGTCCTGAACGCGACGCGGCGGTCGATCGGATTGAGGCCGACGCCAGC GCACGATCGCCGGAAGCCCTCGAAAGCACCGTGTCTTTGGTTGGCGATTAG
Upstream 100 bases:
>100_bases CCGATGCCGAAAGGCCCCTCAGGTGACGGCCATTTCCGGTGGCGAATGAGCATGCTGCTGCGGATGATCGCTCCGAACGC GGTATTTCGAGGAGCACGGC
Downstream 100 bases:
>100_bases GGGCGATGGCTGCTTCATGGAGGGGCCTTCACGGTCTGTGTATTCCGGTGAAAACCACCAGCCGTTCCATTCGCAAACCC GCCGGTGGTTCCGATTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSEIQIVKVDQGAVNARILAKEAKADFRRVEAASLKMPTRFTSAEGKRFFARLFNTLQLNTHFISVIARTRLDHEDVAKV EEAIRAQMDTVTENLNKAIDGAEALFKVHGITSTATYDTVPLDVDVHVLSSIGRRFLEVLGKLDQLMPLLQTLEIHEVIT TQAVDIQRAGLKRQVRDVANGARNFAMGLRRRMNALDAHDVEDRSGPNRQEAEAVGAPDGADEPGPERDAAVDRIEADAS ARSPEALESTVSLVGD
Sequences:
>Translated_256_residues MSEIQIVKVDQGAVNARILAKEAKADFRRVEAASLKMPTRFTSAEGKRFFARLFNTLQLNTHFISVIARTRLDHEDVAKV EEAIRAQMDTVTENLNKAIDGAEALFKVHGITSTATYDTVPLDVDVHVLSSIGRRFLEVLGKLDQLMPLLQTLEIHEVIT TQAVDIQRAGLKRQVRDVANGARNFAMGLRRRMNALDAHDVEDRSGPNRQEAEAVGAPDGADEPGPERDAAVDRIEADAS ARSPEALESTVSLVGD >Mature_255_residues SEIQIVKVDQGAVNARILAKEAKADFRRVEAASLKMPTRFTSAEGKRFFARLFNTLQLNTHFISVIARTRLDHEDVAKVE EAIRAQMDTVTENLNKAIDGAEALFKVHGITSTATYDTVPLDVDVHVLSSIGRRFLEVLGKLDQLMPLLQTLEIHEVITT QAVDIQRAGLKRQVRDVANGARNFAMGLRRRMNALDAHDVEDRSGPNRQEAEAVGAPDGADEPGPERDAAVDRIEADASA RSPEALESTVSLVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28092; Mature: 27961
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIQIVKVDQGAVNARILAKEAKADFRRVEAASLKMPTRFTSAEGKRFFARLFNTLQLN CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH THFISVIARTRLDHEDVAKVEEAIRAQMDTVTENLNKAIDGAEALFKVHGITSTATYDTV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PLDVDVHVLSSIGRRFLEVLGKLDQLMPLLQTLEIHEVITTQAVDIQRAGLKRQVRDVAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GARNFAMGLRRRMNALDAHDVEDRSGPNRQEAEAVGAPDGADEPGPERDAAVDRIEADAS HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC ARSPEALESTVSLVGD CCCHHHHHHHHHHHCC >Mature Secondary Structure SEIQIVKVDQGAVNARILAKEAKADFRRVEAASLKMPTRFTSAEGKRFFARLFNTLQLN CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH THFISVIARTRLDHEDVAKVEEAIRAQMDTVTENLNKAIDGAEALFKVHGITSTATYDTV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PLDVDVHVLSSIGRRFLEVLGKLDQLMPLLQTLEIHEVITTQAVDIQRAGLKRQVRDVAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GARNFAMGLRRRMNALDAHDVEDRSGPNRQEAEAVGAPDGADEPGPERDAAVDRIEADAS HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC ARSPEALESTVSLVGD CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA