| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is mtrA [H]
Identifier: 71907900
GI number: 71907900
Start: 2465264
End: 2466406
Strand: Reverse
Name: mtrA [H]
Synonym: Daro_2280
Alternate gene names: 71907900
Gene position: 2466406-2465264 (Counterclockwise)
Preceding gene: 71907901
Following gene: 71907899
Centisome position: 54.8
GC content: 66.67
Gene sequence:
>1143_bases ATGAGTACGCCTGGACTCGACGCCATACAGGAGCAGATGCACCTGGCCATGGCGGCGACCAAGTGCCACCGCTGTGGCTG CTTCCAGGATACGGTGCAGGCGCTGGAGAACTCGCCGCGTATTCGGGCGGTGCTGCCCGAGCTGATCGCGGAAGCACGGA ACCTCTTCGAGCCCAAGCGCTATGAATGCCTTGGCTGCGAGGTGTGCTGGCCGGCGGTGGCCACCAACGCCGCAGCGGAG ATCGATCCGGCGGTGGCAGAGACTGCTCACTGCGCGACCGCCGAACCGCAGGAGCGTGAAGGCTGGCCGCCGCTGCCGGG GGACTATCACGTCGTACGCTACCAGGCGCCGGTGGCGGTCTGCACCCTCAACTCGGATGACCTAGTGGTCCGCCTGACCG CCACCCAGGCGCCGGGACTTGCCGTTGTCGGGAGCCTGCATACCGAAAACCTCGGCATCGAGCACCTGATCCGCAACCTG CTGCCCAATCCCCATATCCGCTTCCTCATAGTTTGCGGCGAGGACACCAGGAAAGCCATCGGCCACCTGCCGGGCCAGTC CCTCGTGGCCTTGATGCGGAACGGCCTGGAAGATGGCGGCCGTATTCGCGGCGCCGAGGGCAAGCGTCCGGTAATCAAGA ACGTGCCCCCGGAGCATGTCGAGGCGTTCCGGCGGCAAGTGCAGGTGGTGGACTGCATCGGGATGACCGATCTGGAAGGC ATTGCCGCCGAGATTGCCAGGGCAGCCGCTGACGACCCCGGGCCGGCGCCGGAAATTTTCACCGACCTACCCGCGATCCC GGTCCGGCAGGCGGAAGAACCCAGCCGTTTGGTGTCCGACCCGGCCGGCTACCTGGTCCTCTACCCCGACCGGCGACGAA GCCGCTTGGTACTGGAGCACTACGCCAACAGCGGCACCTTGACCCGGGTGATCGAGGGGACGACGCCGACCGCACTTTAT AGCACGGTGATCGAAGAAGGACTGATCTCCCGACTGGATCACGCGGCCTACCTGGGCCGGGAACTCGCCCGGGCGGAAGC CGCGCTCCGGGACGGGCACGACTACGCGCAGGATCGGGCGCCCGGAGAAATCGAAGCCCCCGCACCGGTGGCCAAGTGTG GCTGCTCGGGTGCCTGTCATTGA
Upstream 100 bases:
>100_bases CCATGCGCAACGACGGGAAGATGGTTTATTACCGCCTGAACAGCCCGGGGCTCCTCGAAGCCCTGAAGGGCGACCTGTGC CTGCTTGAGGAACGTATCGC
Downstream 100 bases:
>100_bases AAGGAACAAGAATGCGCCGTGCGCTCTTCTTGGTCGTTCTCGCGGCCGTGGCCGCACTCGGCTGGGCCAAATGGCCGCAG CAACCCCAGTCGGCGGCCTT
Product: tetrahydromethanopterin S-methyltransferase subunit A
Products: NA
Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit A [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSTPGLDAIQEQMHLAMAATKCHRCGCFQDTVQALENSPRIRAVLPELIAEARNLFEPKRYECLGCEVCWPAVATNAAAE IDPAVAETAHCATAEPQEREGWPPLPGDYHVVRYQAPVAVCTLNSDDLVVRLTATQAPGLAVVGSLHTENLGIEHLIRNL LPNPHIRFLIVCGEDTRKAIGHLPGQSLVALMRNGLEDGGRIRGAEGKRPVIKNVPPEHVEAFRRQVQVVDCIGMTDLEG IAAEIARAAADDPGPAPEIFTDLPAIPVRQAEEPSRLVSDPAGYLVLYPDRRRSRLVLEHYANSGTLTRVIEGTTPTALY STVIEEGLISRLDHAAYLGRELARAEAALRDGHDYAQDRAPGEIEAPAPVAKCGCSGACH
Sequences:
>Translated_380_residues MSTPGLDAIQEQMHLAMAATKCHRCGCFQDTVQALENSPRIRAVLPELIAEARNLFEPKRYECLGCEVCWPAVATNAAAE IDPAVAETAHCATAEPQEREGWPPLPGDYHVVRYQAPVAVCTLNSDDLVVRLTATQAPGLAVVGSLHTENLGIEHLIRNL LPNPHIRFLIVCGEDTRKAIGHLPGQSLVALMRNGLEDGGRIRGAEGKRPVIKNVPPEHVEAFRRQVQVVDCIGMTDLEG IAAEIARAAADDPGPAPEIFTDLPAIPVRQAEEPSRLVSDPAGYLVLYPDRRRSRLVLEHYANSGTLTRVIEGTTPTALY STVIEEGLISRLDHAAYLGRELARAEAALRDGHDYAQDRAPGEIEAPAPVAKCGCSGACH >Mature_379_residues STPGLDAIQEQMHLAMAATKCHRCGCFQDTVQALENSPRIRAVLPELIAEARNLFEPKRYECLGCEVCWPAVATNAAAEI DPAVAETAHCATAEPQEREGWPPLPGDYHVVRYQAPVAVCTLNSDDLVVRLTATQAPGLAVVGSLHTENLGIEHLIRNLL PNPHIRFLIVCGEDTRKAIGHLPGQSLVALMRNGLEDGGRIRGAEGKRPVIKNVPPEHVEAFRRQVQVVDCIGMTDLEGI AAEIARAAADDPGPAPEIFTDLPAIPVRQAEEPSRLVSDPAGYLVLYPDRRRSRLVLEHYANSGTLTRVIEGTTPTALYS TVIEEGLISRLDHAAYLGRELARAEAALRDGHDYAQDRAPGEIEAPAPVAKCGCSGACH
Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step [H]
COG id: COG4063
COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit A
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MtrA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005778 - InterPro: IPR013340 [H]
Pfam domain/function: PF04208 MtrA [H]
EC number: =2.1.1.86 [H]
Molecular weight: Translated: 41041; Mature: 40910
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPGLDAIQEQMHLAMAATKCHRCGCFQDTVQALENSPRIRAVLPELIAEARNLFEPKR CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC YECLGCEVCWPAVATNAAAEIDPAVAETAHCATAEPQEREGWPPLPGDYHVVRYQAPVAV CEEECCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEEEECCEEE CTLNSDDLVVRLTATQAPGLAVVGSLHTENLGIEHLIRNLLPNPHIRFLIVCGEDTRKAI EEECCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHH GHLPGQSLVALMRNGLEDGGRIRGAEGKRPVIKNVPPEHVEAFRRQVQVVDCIGMTDLEG HCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH IAAEIARAAADDPGPAPEIFTDLPAIPVRQAEEPSRLVSDPAGYLVLYPDRRRSRLVLEH HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHH YANSGTLTRVIEGTTPTALYSTVIEEGLISRLDHAAYLGRELARAEAALRDGHDYAQDRA HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC PGEIEAPAPVAKCGCSGACH CCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure STPGLDAIQEQMHLAMAATKCHRCGCFQDTVQALENSPRIRAVLPELIAEARNLFEPKR CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC YECLGCEVCWPAVATNAAAEIDPAVAETAHCATAEPQEREGWPPLPGDYHVVRYQAPVAV CEEECCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEEEECCEEE CTLNSDDLVVRLTATQAPGLAVVGSLHTENLGIEHLIRNLLPNPHIRFLIVCGEDTRKAI EEECCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHH GHLPGQSLVALMRNGLEDGGRIRGAEGKRPVIKNVPPEHVEAFRRQVQVVDCIGMTDLEG HCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH IAAEIARAAADDPGPAPEIFTDLPAIPVRQAEEPSRLVSDPAGYLVLYPDRRRSRLVLEH HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHH YANSGTLTRVIEGTTPTALYSTVIEEGLISRLDHAAYLGRELARAEAALRDGHDYAQDRA HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC PGEIEAPAPVAKCGCSGACH CCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA