| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907864
Identifier: 71907864
GI number: 71907864
Start: 2426675
End: 2427895
Strand: Reverse
Name: 71907864
Synonym: Daro_2244
Alternate gene names: NA
Gene position: 2427895-2426675 (Counterclockwise)
Preceding gene: 71907865
Following gene: 71907862
Centisome position: 53.94
GC content: 66.5
Gene sequence:
>1221_bases ATGGACTCCCAACGCTTCGCCATCAAGGGCCGCGTGATCGGCGCGGATGATTCGCAACTGCAGGATGCGCTCGCCCACGT CTACGAGACACCCGAGCGGCCGCGCTGCCTGTGCGTGCCTGGCGGCGTGGAGATGTACGTGGCGCGGCATCGCCAGTTCG TGGTCAAGCGCATGCCGGACAGCGGCAGCACCCACCATCCGAGCTGCCCTTCCTACGAGCCGGAGGTCCAGCAGTCCGGA CTGGGCGAACTGGTCGGCGAAGCGGTGCTGGAGTCGGAACCGGGGCGGTTCGAATTGCGTGTGGATTTCCCCTGGATGCG GGTAATCGGGCGCGCCGTGCCGCGCGGCGAACCCCAGGAGGTGGCAGAAATCGGCGTGCCGAGGAGGCAGATGACGTTGC GCGCCTTGATGCACTTCCTGTTCGAGCGCGCGGGCTTCAACCGCTGGAGCCCGGCGATGGCGGGCAAACGCAACCAGGGC GTGCTGCGCAAGTACCTGCTGGAGGCGGCCGAGGAGATCATGGTCAAGGGCATCCCGCTGGCCGAGCGCCTGTATGTGCC CGAACCGTTCAGCGAGAGCGCCAAGGCCGAGGCGGCACAGCGCCGGCGCGAGAAGCTGGCCGTGCTACGTCCCAAGGACG GGCAGACGCCGCTGGCCGTCGTGATCGGCGAATTCAAGACGAGCGAGGCCACAAGCCAGGGCCGCCGGGTCTGGATCCGG CACATGCCGGACGCGCCGCTGCTGATCGCCAGCCGGAGTTGGGAGCGGATCGAGCGGGTGTTCGCGCCACTGTTTGAGGC GCGCGATGCCGATACCGGCCACCCGGTCCGGGTCATCCTGGCCGCGTTGATCCGCGCCCGCCGTGAATACACCTACGAGA TCGATGCGGCGAGTTTGATGTTGACCAGCGAGCACTGGATTCCCATTGAGGGCGTGCATGAATTGCCCCTGATCGACGCC CTAGTCGCCCAGCACCGCCGCTTCGTCAAACCGCTGCGCTATGACGCTCGGAGCGCGGCGGCCTTTCCGAATGTCCTGCT GCTGGATGCCGGGACGGCGCCGGTGCCGCTACACGTGGTGAGCGCTTTCATGGATACGAAGGAGCGGCTTTCCAAAGAAA GGGCAATTGCGGAAATCGGTGCGCAGGGCGCTTGGGTCTGGAGGACAGAGGAACCGATGCCGCCCTTCAGACGAGATGTA GAGCTGGCGCTGCCGTCTTGA
Upstream 100 bases:
>100_bases GCGATCTTGGGTATCGGCGAGCGGAGCGCGGTGCGGGAGTTGCTGCCGCGGCCCAAGCCGACCCTGGCAGAACTGCTCGA CGAATTGATTTGAGCTCGCC
Downstream 100 bases:
>100_bases TTCGCGCTATTGAAGCGTAGGCCCGCACAAGCGCAGCAACTGCGATCGGATCTCGGCCGGAGATGCTGCCAGATCCACGG TGGCAAACCGTATGCTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDSQRFAIKGRVIGADDSQLQDALAHVYETPERPRCLCVPGGVEMYVARHRQFVVKRMPDSGSTHHPSCPSYEPEVQQSG LGELVGEAVLESEPGRFELRVDFPWMRVIGRAVPRGEPQEVAEIGVPRRQMTLRALMHFLFERAGFNRWSPAMAGKRNQG VLRKYLLEAAEEIMVKGIPLAERLYVPEPFSESAKAEAAQRRREKLAVLRPKDGQTPLAVVIGEFKTSEATSQGRRVWIR HMPDAPLLIASRSWERIERVFAPLFEARDADTGHPVRVILAALIRARREYTYEIDAASLMLTSEHWIPIEGVHELPLIDA LVAQHRRFVKPLRYDARSAAAFPNVLLLDAGTAPVPLHVVSAFMDTKERLSKERAIAEIGAQGAWVWRTEEPMPPFRRDV ELALPS
Sequences:
>Translated_406_residues MDSQRFAIKGRVIGADDSQLQDALAHVYETPERPRCLCVPGGVEMYVARHRQFVVKRMPDSGSTHHPSCPSYEPEVQQSG LGELVGEAVLESEPGRFELRVDFPWMRVIGRAVPRGEPQEVAEIGVPRRQMTLRALMHFLFERAGFNRWSPAMAGKRNQG VLRKYLLEAAEEIMVKGIPLAERLYVPEPFSESAKAEAAQRRREKLAVLRPKDGQTPLAVVIGEFKTSEATSQGRRVWIR HMPDAPLLIASRSWERIERVFAPLFEARDADTGHPVRVILAALIRARREYTYEIDAASLMLTSEHWIPIEGVHELPLIDA LVAQHRRFVKPLRYDARSAAAFPNVLLLDAGTAPVPLHVVSAFMDTKERLSKERAIAEIGAQGAWVWRTEEPMPPFRRDV ELALPS >Mature_406_residues MDSQRFAIKGRVIGADDSQLQDALAHVYETPERPRCLCVPGGVEMYVARHRQFVVKRMPDSGSTHHPSCPSYEPEVQQSG LGELVGEAVLESEPGRFELRVDFPWMRVIGRAVPRGEPQEVAEIGVPRRQMTLRALMHFLFERAGFNRWSPAMAGKRNQG VLRKYLLEAAEEIMVKGIPLAERLYVPEPFSESAKAEAAQRRREKLAVLRPKDGQTPLAVVIGEFKTSEATSQGRRVWIR HMPDAPLLIASRSWERIERVFAPLFEARDADTGHPVRVILAALIRARREYTYEIDAASLMLTSEHWIPIEGVHELPLIDA LVAQHRRFVKPLRYDARSAAAFPNVLLLDAGTAPVPLHVVSAFMDTKERLSKERAIAEIGAQGAWVWRTEEPMPPFRRDV ELALPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45791; Mature: 45791
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQRFAIKGRVIGADDSQLQDALAHVYETPERPRCLCVPGGVEMYVARHRQFVVKRMPD CCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC SGSTHHPSCPSYEPEVQQSGLGELVGEAVLESEPGRFELRVDFPWMRVIGRAVPRGEPQE CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCHHH VAEIGVPRRQMTLRALMHFLFERAGFNRWSPAMAGKRNQGVLRKYLLEAAEEIMVKGIPL HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH AERLYVPEPFSESAKAEAAQRRREKLAVLRPKDGQTPLAVVIGEFKTSEATSQGRRVWIR HHHCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCHHHHCCCEEEEE HMPDAPLLIASRSWERIERVFAPLFEARDADTGHPVRVILAALIRARREYTYEIDAASLM ECCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEECHHEEE LTSEHWIPIEGVHELPLIDALVAQHRRFVKPLRYDARSAAAFPNVLLLDAGTAPVPLHVV EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHHHH SAFMDTKERLSKERAIAEIGAQGAWVWRTEEPMPPFRRDVELALPS HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCEEECCC >Mature Secondary Structure MDSQRFAIKGRVIGADDSQLQDALAHVYETPERPRCLCVPGGVEMYVARHRQFVVKRMPD CCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC SGSTHHPSCPSYEPEVQQSGLGELVGEAVLESEPGRFELRVDFPWMRVIGRAVPRGEPQE CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCHHH VAEIGVPRRQMTLRALMHFLFERAGFNRWSPAMAGKRNQGVLRKYLLEAAEEIMVKGIPL HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH AERLYVPEPFSESAKAEAAQRRREKLAVLRPKDGQTPLAVVIGEFKTSEATSQGRRVWIR HHHCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCHHHHCCCEEEEE HMPDAPLLIASRSWERIERVFAPLFEARDADTGHPVRVILAALIRARREYTYEIDAASLM ECCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEECHHEEE LTSEHWIPIEGVHELPLIDALVAQHRRFVKPLRYDARSAAAFPNVLLLDAGTAPVPLHVV EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHHHH SAFMDTKERLSKERAIAEIGAQGAWVWRTEEPMPPFRRDVELALPS HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA