| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907862
Identifier: 71907862
GI number: 71907862
Start: 2423317
End: 2423877
Strand: Reverse
Name: 71907862
Synonym: Daro_2240
Alternate gene names: NA
Gene position: 2423877-2423317 (Counterclockwise)
Preceding gene: 71907864
Following gene: 71907861
Centisome position: 53.85
GC content: 56.33
Gene sequence:
>561_bases ATGTCATGGCCCTCGAGCTCATCCAGAACGCGGATGACGCAAAAGCGGAGGCGGTTGTTTTCGACATCAGCGACCGGGGC CTTCTTGTCGTCAACAGTGGCAAGTTCACCTACTGCGGTGAGCCCTCCCGACATTCAGGGCGATGACGTTCAGTTTGACG AATCGCCAAGTCGAGATAGTCAGGCGGCCAAAGTCAACGCCCGGATCGTTGATCTTGTTGCGAGACAGGGGGTTGCTCCT GGAGACATTACCGTATTGATTGCCGATGCTTTGCACAAGGCGGAGTACTACGCGGCACTTCGACGGTTACCCCTTCCTCG ACCCGCGACTTGGCTTGAGGAGGGTGTCCGGCGCAACAATACCGTACTGATTGACACGATCCAGCGCTTCAAGGGCCTCG AATCGCCGATCGTGATCTTGTGGGGCCTGGATACCATTGATCTTTCCCGGAATCTGGAGCTGCGTTATGTCGGCATGAGC CGAGCAAAGTCTTTGCTTGTCGTCGTCGGAAAGGCTGGTACCTGTGCGGCCTTCAGATTGGACGCTGTTCCGAAGGATTG A
Upstream 100 bases:
>100_bases ACAAGAATGGATCAACAAACCCAACCCCGCAGAAGCGGCTCGTACACAGCGAACCTTCTCGGAAACATCAGGAGTCACTT GGCTGGACTCCAGGGCTACG
Downstream 100 bases:
>100_bases AGGGAGAAATTGCAGGAAGGTGTGCGCTGCCCCAACGTGTAGCCAACTTGCAGATATGGGTTCGGTTGCTTAATGCCATC AAACTGGCATGGGGTACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSWPSSSSRTRMTQKRRRLFSTSATGAFLSSTVASSPTAVSPPDIQGDDVQFDESPSRDSQAAKVNARIVDLVARQGVAP GDITVLIADALHKAEYYAALRRLPLPRPATWLEEGVRRNNTVLIDTIQRFKGLESPIVILWGLDTIDLSRNLELRYVGMS RAKSLLVVVGKAGTCAAFRLDAVPKD
Sequences:
>Translated_186_residues MSWPSSSSRTRMTQKRRRLFSTSATGAFLSSTVASSPTAVSPPDIQGDDVQFDESPSRDSQAAKVNARIVDLVARQGVAP GDITVLIADALHKAEYYAALRRLPLPRPATWLEEGVRRNNTVLIDTIQRFKGLESPIVILWGLDTIDLSRNLELRYVGMS RAKSLLVVVGKAGTCAAFRLDAVPKD >Mature_185_residues SWPSSSSRTRMTQKRRRLFSTSATGAFLSSTVASSPTAVSPPDIQGDDVQFDESPSRDSQAAKVNARIVDLVARQGVAPG DITVLIADALHKAEYYAALRRLPLPRPATWLEEGVRRNNTVLIDTIQRFKGLESPIVILWGLDTIDLSRNLELRYVGMSR AKSLLVVVGKAGTCAAFRLDAVPKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20323; Mature: 20192
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWPSSSSRTRMTQKRRRLFSTSATGAFLSSTVASSPTAVSPPDIQGDDVQFDESPSRDS CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QAAKVNARIVDLVARQGVAPGDITVLIADALHKAEYYAALRRLPLPRPATWLEEGVRRNN HHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC TVLIDTIQRFKGLESPIVILWGLDTIDLSRNLELRYVGMSRAKSLLVVVGKAGTCAAFRL CEEEEEHHHHCCCCCCEEEEECCCEEECCCCCEEEEECHHHCCEEEEEECCCCCEEEEEE DAVPKD CCCCCC >Mature Secondary Structure SWPSSSSRTRMTQKRRRLFSTSATGAFLSSTVASSPTAVSPPDIQGDDVQFDESPSRDS CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QAAKVNARIVDLVARQGVAPGDITVLIADALHKAEYYAALRRLPLPRPATWLEEGVRRNN HHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC TVLIDTIQRFKGLESPIVILWGLDTIDLSRNLELRYVGMSRAKSLLVVVGKAGTCAAFRL CEEEEEHHHHCCCCCCEEEEECCCEEECCCCCEEEEECHHHCCEEEEEECCCCCEEEEEE DAVPKD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA