| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907827
Identifier: 71907827
GI number: 71907827
Start: 2381666
End: 2382505
Strand: Reverse
Name: 71907827
Synonym: Daro_2205
Alternate gene names: NA
Gene position: 2382505-2381666 (Counterclockwise)
Preceding gene: 71907828
Following gene: 71907826
Centisome position: 52.93
GC content: 56.9
Gene sequence:
>840_bases ATGGATAAGCAGGCTGAAACTTTGAAGGAACTGCGGACGATCATTGCCGCACAACAGGAACTCTTGCGCATCGCGTTGTA CACGATGACGCAAGGGCCGATCGCTTACGGCGATCAAGAGTTGAAGTGCATCCTAGAGGAAGACCAAGTGCGGGCAACGT GCGCGGTTGCCATGGGCGCCGGTCAGTCGCTGAATACCATCCTGAAGCTGTCGGACGATCAAGGCATTGGGATCCGCGAC CTGTACCCGATCGCGCGCTCAGTTGTGGAAGGCTTTATCAATGCAGCCTTCTTCGTAACGCAGCCCGCTGACATTTCGCG CCGTGCACTGGAACACAGGCACTTTGCGGCTTGGAAGCACCACAACCGCATCATTGGCAACGGCGATATCATGATTGCGA TTGGCGCAGCCGACCCCAAGACTGAAGCAGCAAGGCTGTTCCCCAACTTCGCGGAGAAGGGAAAGGACTCTTGGACTGCG CTGAACGCCGTGGACCGCATCAACAAGGTCGGCAAGGTCGTCAAGGCGTCTGCCGGTGCGTTGATCGGTGCATACGCTGG CATCTACGCTGTGTCGTCCGAAATCATCCACGGCTCTGTGTACGGAATGAGCTACTTTTTCAGCGCCCACGTCCGAGAAC AAACCGTTGAGGGCTTCAAGTCGGGGACAGTCGAACAAGTCATCGACATACTAATAGCGGTCTCGCACGCGTCCAGCGGC TTCCTGTCCGCATTCGCAAACGTACAAGAGCTTGGCCCTTTCGTGCTGGCCGAACACGACATGTTCAAACGCTTGTTCAA AGCGGCGACGGGCGACGAATGGCAGGGGCAGGACGAATGA
Upstream 100 bases:
>100_bases GCTGGAACAGCTGTTTCCTCGATAGGCACAGGCGGAAATGTTATGGATGACGCTGACGTAGAACTGCTCACCGTCGCTCA AACGCCAGGCGGATATTTAC
Downstream 100 bases:
>100_bases TTGCTCTATACACGTAGGTAGTCCTAGATGTCGAGTCAATCCTCTGTTCGGTACATTCACTGAATCGGTGTTGACGCTGG GTCGCGCGGGTTCGAGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MDKQAETLKELRTIIAAQQELLRIALYTMTQGPIAYGDQELKCILEEDQVRATCAVAMGAGQSLNTILKLSDDQGIGIRD LYPIARSVVEGFINAAFFVTQPADISRRALEHRHFAAWKHHNRIIGNGDIMIAIGAADPKTEAARLFPNFAEKGKDSWTA LNAVDRINKVGKVVKASAGALIGAYAGIYAVSSEIIHGSVYGMSYFFSAHVREQTVEGFKSGTVEQVIDILIAVSHASSG FLSAFANVQELGPFVLAEHDMFKRLFKAATGDEWQGQDE
Sequences:
>Translated_279_residues MDKQAETLKELRTIIAAQQELLRIALYTMTQGPIAYGDQELKCILEEDQVRATCAVAMGAGQSLNTILKLSDDQGIGIRD LYPIARSVVEGFINAAFFVTQPADISRRALEHRHFAAWKHHNRIIGNGDIMIAIGAADPKTEAARLFPNFAEKGKDSWTA LNAVDRINKVGKVVKASAGALIGAYAGIYAVSSEIIHGSVYGMSYFFSAHVREQTVEGFKSGTVEQVIDILIAVSHASSG FLSAFANVQELGPFVLAEHDMFKRLFKAATGDEWQGQDE >Mature_279_residues MDKQAETLKELRTIIAAQQELLRIALYTMTQGPIAYGDQELKCILEEDQVRATCAVAMGAGQSLNTILKLSDDQGIGIRD LYPIARSVVEGFINAAFFVTQPADISRRALEHRHFAAWKHHNRIIGNGDIMIAIGAADPKTEAARLFPNFAEKGKDSWTA LNAVDRINKVGKVVKASAGALIGAYAGIYAVSSEIIHGSVYGMSYFFSAHVREQTVEGFKSGTVEQVIDILIAVSHASSG FLSAFANVQELGPFVLAEHDMFKRLFKAATGDEWQGQDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30418; Mature: 30418
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQAETLKELRTIIAAQQELLRIALYTMTQGPIAYGDQELKCILEEDQVRATCAVAMGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GQSLNTILKLSDDQGIGIRDLYPIARSVVEGFINAAFFVTQPADISRRALEHRHFAAWKH CCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHH HNRIIGNGDIMIAIGAADPKTEAARLFPNFAEKGKDSWTALNAVDRINKVGKVVKASAGA CCEEEECCCEEEEEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH LIGAYAGIYAVSSEIIHGSVYGMSYFFSAHVREQTVEGFKSGTVEQVIDILIAVSHASSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH FLSAFANVQELGPFVLAEHDMFKRLFKAATGDEWQGQDE HHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDKQAETLKELRTIIAAQQELLRIALYTMTQGPIAYGDQELKCILEEDQVRATCAVAMGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GQSLNTILKLSDDQGIGIRDLYPIARSVVEGFINAAFFVTQPADISRRALEHRHFAAWKH CCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHH HNRIIGNGDIMIAIGAADPKTEAARLFPNFAEKGKDSWTALNAVDRINKVGKVVKASAGA CCEEEECCCEEEEEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH LIGAYAGIYAVSSEIIHGSVYGMSYFFSAHVREQTVEGFKSGTVEQVIDILIAVSHASSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH FLSAFANVQELGPFVLAEHDMFKRLFKAATGDEWQGQDE HHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA