| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is yceG [C]
Identifier: 71907820
GI number: 71907820
Start: 2373387
End: 2374382
Strand: Reverse
Name: yceG [C]
Synonym: Daro_2198
Alternate gene names: 71907820
Gene position: 2374382-2373387 (Counterclockwise)
Preceding gene: 71907823
Following gene: 71907819
Centisome position: 52.75
GC content: 57.73
Gene sequence:
>996_bases GTGCGCACCCTGACCAAGATTCTTTTCGCTGTTTTTGTGTTGTTCGCGATCGCGGCTGGCGGGCTGTGGTGGTGGGCAAA TCAGCCATTGTCGCTGCGCTCTTCACCGCTCGATTTTCGTATTGCGGCCGGTAGCAGCCTGCGTTCGGCGATTACCCAGA TGCGGGAGTCGGGTATTGAGGTCGAGCCTGGCTTGCTCGCCTTCCTGGCACGGCTTAACCGGGCCGATACGGCCATCAAG GCAGGTAGCTATGCGGTCAAGGATGGGGTAACCCCGATCCGCCTGCTGGATAAATTGCTCAAGGGCAAAGTTACGCAAGG TGAACTGACCCTGGTTGAAGGCTGGACTTTTCGGCAATGGCGAGCCCGTCTGGATAAACATCCGGATCTGAAGCACGAAT TGCTTGGCTTGAGCGAAGCGGAAATCATCGAAAAGCTGGGTTTGAGCGTTGCAGGACTGGAAGGGCAGTTGTTCCCGGAT ACTTATCTGTTCGACAAACAATCCAGCGATCTCGAACTGCTCGCGCGGGCCCAGCGGGCCATGCAGCGCAAACTGGATGC GGAATGGGCAGGCCGCGCCGCCGGTCTTCCCTACAAAACTTCGAATGACGCGCTGATCATGGCATCCATCGTCGAGAAAG AAACCGGGCGCGAATCGGATCGAGAGCTCGTTGCCGCAGTCTTCGTCAATCGCTTGCGCAAAGGGATGTTGCTGCAGACT GATCCGACTGTGATCTACGGCATTGGCGAGAAATTTGATGGCAATCTGAGAAAGCGCGACCTGCTCACGGACACCCCGTA CAATACCTACACCCGTCCTGGCTTGCCGCCAACGCCGATCGCGATGCCGGGGCAGGCTTCCATCAGGGCGGCGCTGAATC CGGCGCCCAGCGACGTCATCTATTTCGTGGCTCGAGGCGATGGCAGCAGTGAATTTTCCCGGACCCTGGACGAACACAAC CGGGCGGTTAACAAATATCAGAGAGGTGGGAAGTGA
Upstream 100 bases:
>100_bases GGATTCATGGGGGCTCCTGATGGGGTTTCGGATATTATATCGCTCGTTATAACGTGCTCGTTCCACACGGGCAAGACCTG CTTGCAGCCGACGAGTTCCC
Downstream 100 bases:
>100_bases AAGGCAAATTCATCACTTTCGAAGGCATCGACGGTGCCGGCAAAAGTAGCCACGTCGAATGGCTGGCTGGATTGCTGCGC CAACGCGGTATCGTTGTTCA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MRTLTKILFAVFVLFAIAAGGLWWWANQPLSLRSSPLDFRIAAGSSLRSAITQMRESGIEVEPGLLAFLARLNRADTAIK AGSYAVKDGVTPIRLLDKLLKGKVTQGELTLVEGWTFRQWRARLDKHPDLKHELLGLSEAEIIEKLGLSVAGLEGQLFPD TYLFDKQSSDLELLARAQRAMQRKLDAEWAGRAAGLPYKTSNDALIMASIVEKETGRESDRELVAAVFVNRLRKGMLLQT DPTVIYGIGEKFDGNLRKRDLLTDTPYNTYTRPGLPPTPIAMPGQASIRAALNPAPSDVIYFVARGDGSSEFSRTLDEHN RAVNKYQRGGK
Sequences:
>Translated_331_residues MRTLTKILFAVFVLFAIAAGGLWWWANQPLSLRSSPLDFRIAAGSSLRSAITQMRESGIEVEPGLLAFLARLNRADTAIK AGSYAVKDGVTPIRLLDKLLKGKVTQGELTLVEGWTFRQWRARLDKHPDLKHELLGLSEAEIIEKLGLSVAGLEGQLFPD TYLFDKQSSDLELLARAQRAMQRKLDAEWAGRAAGLPYKTSNDALIMASIVEKETGRESDRELVAAVFVNRLRKGMLLQT DPTVIYGIGEKFDGNLRKRDLLTDTPYNTYTRPGLPPTPIAMPGQASIRAALNPAPSDVIYFVARGDGSSEFSRTLDEHN RAVNKYQRGGK >Mature_331_residues MRTLTKILFAVFVLFAIAAGGLWWWANQPLSLRSSPLDFRIAAGSSLRSAITQMRESGIEVEPGLLAFLARLNRADTAIK AGSYAVKDGVTPIRLLDKLLKGKVTQGELTLVEGWTFRQWRARLDKHPDLKHELLGLSEAEIIEKLGLSVAGLEGQLFPD TYLFDKQSSDLELLARAQRAMQRKLDAEWAGRAAGLPYKTSNDALIMASIVEKETGRESDRELVAAVFVNRLRKGMLLQT DPTVIYGIGEKFDGNLRKRDLLTDTPYNTYTRPGLPPTPIAMPGQASIRAALNPAPSDVIYFVARGDGSSEFSRTLDEHN RAVNKYQRGGK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=315, Percent_Identity=40.6349206349206, Blast_Score=217, Evalue=8e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36627; Mature: 36627
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLTKILFAVFVLFAIAAGGLWWWANQPLSLRSSPLDFRIAAGSSLRSAITQMRESGIE CHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC VEPGLLAFLARLNRADTAIKAGSYAVKDGVTPIRLLDKLLKGKVTQGELTLVEGWTFRQW CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHH RARLDKHPDLKHELLGLSEAEIIEKLGLSVAGLEGQLFPDTYLFDKQSSDLELLARAQRA HHHCCCCCCHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHHH MQRKLDAEWAGRAAGLPYKTSNDALIMASIVEKETGRESDRELVAAVFVNRLRKGMLLQT HHHHHCHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEC DPTVIYGIGEKFDGNLRKRDLLTDTPYNTYTRPGLPPTPIAMPGQASIRAALNPAPSDVI CCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE YFVARGDGSSEFSRTLDEHNRAVNKYQRGGK EEEEECCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTLTKILFAVFVLFAIAAGGLWWWANQPLSLRSSPLDFRIAAGSSLRSAITQMRESGIE CHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC VEPGLLAFLARLNRADTAIKAGSYAVKDGVTPIRLLDKLLKGKVTQGELTLVEGWTFRQW CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHH RARLDKHPDLKHELLGLSEAEIIEKLGLSVAGLEGQLFPDTYLFDKQSSDLELLARAQRA HHHCCCCCCHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHHH MQRKLDAEWAGRAAGLPYKTSNDALIMASIVEKETGRESDRELVAAVFVNRLRKGMLLQT HHHHHCHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEC DPTVIYGIGEKFDGNLRKRDLLTDTPYNTYTRPGLPPTPIAMPGQASIRAALNPAPSDVI CCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE YFVARGDGSSEFSRTLDEHNRAVNKYQRGGK EEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]