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The map label for this gene is 71907799

Identifier: 71907799

GI number: 71907799

Start: 2351368

End: 2351880

Strand: Reverse

Name: 71907799

Synonym: Daro_2177

Alternate gene names: NA

Gene position: 2351880-2351368 (Counterclockwise)

Preceding gene: 71907800

Following gene: 71907798

Centisome position: 52.25

GC content: 55.56

Gene sequence:

>513_bases
GTGGCGAAAAAAGAGAGTGTTCAAAAGCGGTTGCAAAAGGTTCGTCCGCCGCGCGTTCAGCTAACCTACGATGTTGAGAT
CGGCGATGCCCTCGAGGTCAAGGAGTTGCCCTTTGTGGTTGGCGTACTAGGGGATTTTGCTGCCCAGTCAAAAGAGCCGC
AGGGCAAGGTTCGCGATCGCAAGTTTGTGAACGTTGATATGGACAATTTCGACGATGTCATGGAAGGCATGGCGCCGCGC
GCTGCATTCCGCGTCAAGAACCGACTGACCGAAGCCGGTGGCGAACTGGGCGTCGATATCAAGTTCGAAAAATTCGAGGA
TTTTCGCCCGGAGTCTGTGGTTCAGCAGGTTGAACCGCTGCGCAAGCTGCAGGAAGCGCGGGCCAAGCTGGCCGATCTCC
GTAACAAGCTGGCCGGCAATGAAAAGCTTGAAGATCTGCTGAATGATGTCCTGAACAGCACCGAGCAGTTGCAGAGTCTG
GGCGGCAAGACGAACGCAGGAGACGGACAATGA

Upstream 100 bases:

>100_bases
CGTTCAGCCTTTTGAAGTGATTTTTTAAGTTAATTATTGATCGGCCCTGAGGCGTTTTTCGCTTTGTGTGGCCGGCTGGA
TATCCATACCGGAGGGTCTT

Downstream 100 bases:

>100_bases
GCGCGCAGGCTGCAGTTGCCTCCGCGCCGGCCAATGCTCGCGAATCGGGCCTGCTCGACCAGATCATCGAAGAGAGCCGT
GTCGCCCAGTCCGATCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: T6ss S; Type VI Secretion Protein Family; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein; Conserved Protein

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MAKKESVQKRLQKVRPPRVQLTYDVEIGDALEVKELPFVVGVLGDFAAQSKEPQGKVRDRKFVNVDMDNFDDVMEGMAPR
AAFRVKNRLTEAGGELGVDIKFEKFEDFRPESVVQQVEPLRKLQEARAKLADLRNKLAGNEKLEDLLNDVLNSTEQLQSL
GGKTNAGDGQ

Sequences:

>Translated_170_residues
MAKKESVQKRLQKVRPPRVQLTYDVEIGDALEVKELPFVVGVLGDFAAQSKEPQGKVRDRKFVNVDMDNFDDVMEGMAPR
AAFRVKNRLTEAGGELGVDIKFEKFEDFRPESVVQQVEPLRKLQEARAKLADLRNKLAGNEKLEDLLNDVLNSTEQLQSL
GGKTNAGDGQ
>Mature_169_residues
AKKESVQKRLQKVRPPRVQLTYDVEIGDALEVKELPFVVGVLGDFAAQSKEPQGKVRDRKFVNVDMDNFDDVMEGMAPRA
AFRVKNRLTEAGGELGVDIKFEKFEDFRPESVVQQVEPLRKLQEARAKLADLRNKLAGNEKLEDLLNDVLNSTEQLQSLG
GKTNAGDGQ

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19041; Mature: 18910

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKESVQKRLQKVRPPRVQLTYDVEIGDALEVKELPFVVGVLGDFAAQSKEPQGKVRDR
CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KFVNVDMDNFDDVMEGMAPRAAFRVKNRLTEAGGELGVDIKFEKFEDFRPESVVQQVEPL
EEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCHHHHHHHHHHH
RKLQEARAKLADLRNKLAGNEKLEDLLNDVLNSTEQLQSLGGKTNAGDGQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AKKESVQKRLQKVRPPRVQLTYDVEIGDALEVKELPFVVGVLGDFAAQSKEPQGKVRDR
CCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KFVNVDMDNFDDVMEGMAPRAAFRVKNRLTEAGGELGVDIKFEKFEDFRPESVVQQVEPL
EEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCHHHHHHHHHHH
RKLQEARAKLADLRNKLAGNEKLEDLLNDVLNSTEQLQSLGGKTNAGDGQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA