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The map label for this gene is 71907794

Identifier: 71907794

GI number: 71907794

Start: 2345929

End: 2346993

Strand: Reverse

Name: 71907794

Synonym: Daro_2172

Alternate gene names: NA

Gene position: 2346993-2345929 (Counterclockwise)

Preceding gene: 71907795

Following gene: 71907793

Centisome position: 52.14

GC content: 59.62

Gene sequence:

>1065_bases
ATGCGCACCTCGCAACGGCGACTCGATCCTGGCCTAGTCGATAGCACCCTTGAGGCGCCGGAACGCTACGAGTTTTTCCA
GCTCGTGCGTCTGTATGAAAGCGTCTTCCGGAAAACGGCCCGGACAGCCGGTGGCGATGTCGTCAACGAGCGGATTCGCT
TCCGTAATTCGTTGCGTCTCGGCTTTGCACCCAGCCAGGTCGACGCCATGGCACCGAGTTACCGGATCGATGAAGAAGGG
CTGGCTACCGCCGATCTGGAGCGGGTCGAGATCACGCCAAGTTTCATGGGTATGCTGGGCGTCAATGGCACGCTGCCGAT
TCATTACACCGAGCAGGTCATCAACCAGGCGCGCTTCAAGCGTGATGACTCCGGGCGGGCATTCCTCGATCTGTTCACCA
ATCGCTCGGTTGGTCATTTCTACCGCGCCTGGAAGAAATACAAGCTGCCGATCCAGTATGAAACGGATCGGCAGAACCGT
TTTCTCCCGATTATTCTGGCGCTGAGCGGACTGGGCTTTGATGCCTTGCGTCAACGCATGAATGAAGGACCAGGCGCCAT
CGACGATGAGTCGATTGCCTTCTTTGCCGGCCTTTTGCGGCAGCGGCCGGTCTCGGCCGAAACCCTGCAGCGCGTGATCA
GCGGCTATTTTCGCGAAAGCGTCGAAGTTGAACAGTTCGTCGGGCATTGGTATGCCATTCCTGCTGAGCAGCGCTCGACG
CTGGGTGGCCACAACGTCGTACTGGGCGGCAACGCCCTGGTTGGCGAACGGGTCTGGCAGCGTAATTTGCGACTGCGCAT
CCATATTGGCCCCCTGCGTCACGAGCGCTACCTGGCCTTCCTGCCTAATGGCGAGCTGGCTGCCGCCCTCAAGAAAATCC
TTACGCTGGCGACGGGCGGCCAGTTCGAATACGAAATCTGCCCGATCCTGCGCGCTGCCGATGTGCGCCCGGCCGGCCTG
GGCGCTGCGAACGGCTGCCGCCTGGGTTACGACAGCTTCATGCTGACTAGTCCGGAAACAAACGACCGCAGCGATACCCG
CTATCTCACCAATTTCATTCACTAA

Upstream 100 bases:

>100_bases
TCGTTCGCTGCATCGACCGCTTCCTCGGCCTGTACGTCAGTCTCAACAGCTTCATTCAACTGGTTGTGGTTTCCAATCGA
ACCGGAGAGGAATTGATCCG

Downstream 100 bases:

>100_bases
GACAACGAACGACCGCGATGAGCACCTCCCTGAAAACCCTGATCAGCAAACTGAATAGCACCTGCCGCCAGGCAGCCGAA
CGCGCCGCCAGTCTGTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss R; Quinoprotein Dehydrogenase; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRTSQRRLDPGLVDSTLEAPERYEFFQLVRLYESVFRKTARTAGGDVVNERIRFRNSLRLGFAPSQVDAMAPSYRIDEEG
LATADLERVEITPSFMGMLGVNGTLPIHYTEQVINQARFKRDDSGRAFLDLFTNRSVGHFYRAWKKYKLPIQYETDRQNR
FLPIILALSGLGFDALRQRMNEGPGAIDDESIAFFAGLLRQRPVSAETLQRVISGYFRESVEVEQFVGHWYAIPAEQRST
LGGHNVVLGGNALVGERVWQRNLRLRIHIGPLRHERYLAFLPNGELAAALKKILTLATGGQFEYEICPILRAADVRPAGL
GAANGCRLGYDSFMLTSPETNDRSDTRYLTNFIH

Sequences:

>Translated_354_residues
MRTSQRRLDPGLVDSTLEAPERYEFFQLVRLYESVFRKTARTAGGDVVNERIRFRNSLRLGFAPSQVDAMAPSYRIDEEG
LATADLERVEITPSFMGMLGVNGTLPIHYTEQVINQARFKRDDSGRAFLDLFTNRSVGHFYRAWKKYKLPIQYETDRQNR
FLPIILALSGLGFDALRQRMNEGPGAIDDESIAFFAGLLRQRPVSAETLQRVISGYFRESVEVEQFVGHWYAIPAEQRST
LGGHNVVLGGNALVGERVWQRNLRLRIHIGPLRHERYLAFLPNGELAAALKKILTLATGGQFEYEICPILRAADVRPAGL
GAANGCRLGYDSFMLTSPETNDRSDTRYLTNFIH
>Mature_354_residues
MRTSQRRLDPGLVDSTLEAPERYEFFQLVRLYESVFRKTARTAGGDVVNERIRFRNSLRLGFAPSQVDAMAPSYRIDEEG
LATADLERVEITPSFMGMLGVNGTLPIHYTEQVINQARFKRDDSGRAFLDLFTNRSVGHFYRAWKKYKLPIQYETDRQNR
FLPIILALSGLGFDALRQRMNEGPGAIDDESIAFFAGLLRQRPVSAETLQRVISGYFRESVEVEQFVGHWYAIPAEQRST
LGGHNVVLGGNALVGERVWQRNLRLRIHIGPLRHERYLAFLPNGELAAALKKILTLATGGQFEYEICPILRAADVRPAGL
GAANGCRLGYDSFMLTSPETNDRSDTRYLTNFIH

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40092; Mature: 40092

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSQRRLDPGLVDSTLEAPERYEFFQLVRLYESVFRKTARTAGGDVVNERIRFRNSLRL
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEE
GFAPSQVDAMAPSYRIDEEGLATADLERVEITPSFMGMLGVNGTLPIHYTEQVINQARFK
CCCCCHHHHCCCCCEECCCCCCCCCCCEEEECHHHHHHHCCCCCCCEEHHHHHHHHHHCC
RDDSGRAFLDLFTNRSVGHFYRAWKKYKLPIQYETDRQNRFLPIILALSGLGFDALRQRM
CCCCCCEEEEHHHCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEHHCCCHHHHHHHH
NEGPGAIDDESIAFFAGLLRQRPVSAETLQRVISGYFRESVEVEQFVGHWYAIPAEQRST
HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCHHHHC
LGGHNVVLGGNALVGERVWQRNLRLRIHIGPLRHERYLAFLPNGELAAALKKILTLATGG
CCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
QFEYEICPILRAADVRPAGLGAANGCRLGYDSFMLTSPETNDRSDTRYLTNFIH
CEEEEHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRTSQRRLDPGLVDSTLEAPERYEFFQLVRLYESVFRKTARTAGGDVVNERIRFRNSLRL
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEE
GFAPSQVDAMAPSYRIDEEGLATADLERVEITPSFMGMLGVNGTLPIHYTEQVINQARFK
CCCCCHHHHCCCCCEECCCCCCCCCCCEEEECHHHHHHHCCCCCCCEEHHHHHHHHHHCC
RDDSGRAFLDLFTNRSVGHFYRAWKKYKLPIQYETDRQNRFLPIILALSGLGFDALRQRM
CCCCCCEEEEHHHCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEHHCCCHHHHHHHH
NEGPGAIDDESIAFFAGLLRQRPVSAETLQRVISGYFRESVEVEQFVGHWYAIPAEQRST
HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCHHHHC
LGGHNVVLGGNALVGERVWQRNLRLRIHIGPLRHERYLAFLPNGELAAALKKILTLATGG
CCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
QFEYEICPILRAADVRPAGLGAANGCRLGYDSFMLTSPETNDRSDTRYLTNFIH
CEEEEHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA