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The map label for this gene is ssuC [C]

Identifier: 71907775

GI number: 71907775

Start: 2321708

End: 2322523

Strand: Reverse

Name: ssuC [C]

Synonym: Daro_2152

Alternate gene names: 71907775

Gene position: 2322523-2321708 (Counterclockwise)

Preceding gene: 71907776

Following gene: 71907774

Centisome position: 51.6

GC content: 63.11

Gene sequence:

>816_bases
ATGCTGCAGAAAATGAAAGACTTCGCTCACGGTGCGCTGGTGCCGGTGCTCTTGCTGATTCTGTGGGAGGCCGGCTCGCG
GGCCGGCCTGTTCTCGGAGGTGCTGCTGCCGTCGCCGACGGCGGTGGCCATCAAGTGGTGGGCCTACCTGATGCCGGGGC
AGCCGCAGGAAGCAGGGCAGAGTACGCTGGCCTGGATGTTCTCCGGCGAACTGCCGCATGACGCTTACTCCAGCCTGTTC
CGCGTCATTGCCGGCTTCCTGATCGGTGCCGGTCTGGCCTTGCCGTTCGGTCTGCTGATGGGGGCCAGCACCCGCATCTA
CGCCCTGTTCAACCCGCTGATGCAGATCCTGCGACCGATTCCGCCGATTGCCTACATCCCGCTGGCGATCCTCTGGTTCG
GGCTGGGCAATCCGCCTTCCTTCTTCCTGATCGCCATCGGCGCCTTTTTTCCGGTGCTGATGAACACCATCGCCGGTGTG
CGGCAGGTGGATGGCATCTACCTGCGGGCAGCGCGCAACCTCGGCGTCAATCAATGGACGATGTTCACCCGAGTGATCCT
GCCCGCCGCCACGCCCTATATCCTGGCCGGCGTGCGTATCGGCATCGGTACCGCTTTCATCGTGGTGATCGTTTCCGAAA
TGATCGCGGTCAATGACGGCCTCGGCTTCCGCATCCTCGAAGCCCGGGAATTCATGTGGTCGGACAAGATCATCGCCGGC
ATGATCACCATCGGCCTGCTTGGCCTGGCCATCGACACGGCGGTTAGCCGACTGAACAACCACCTGCTGCGCTGGCATCG
CGGCCTGGAGCACTAA

Upstream 100 bases:

>100_bases
GTACGGTGTCGGCCGCATGGCCAAGCCGCCGAAGGCGGCCGAGTGGGTCAAGCTCGACCTGCTGCAAAAGGCCAAGGCCG
ATCTGAAGGTGAAATAAGCC

Downstream 100 bases:

>100_bases
GCATGGCGCAAATCCATATCAACAACGTACAGAAGGTCTTCAAGACGCCGGGCGAGGATGTCGTCGCCCTGAAGGACATC
AATCTCGAAATCAAGGCCGG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLQKMKDFAHGALVPVLLLILWEAGSRAGLFSEVLLPSPTAVAIKWWAYLMPGQPQEAGQSTLAWMFSGELPHDAYSSLF
RVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPIPPIAYIPLAILWFGLGNPPSFFLIAIGAFFPVLMNTIAGV
RQVDGIYLRAARNLGVNQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIAVNDGLGFRILEAREFMWSDKIIAG
MITIGLLGLAIDTAVSRLNNHLLRWHRGLEH

Sequences:

>Translated_271_residues
MLQKMKDFAHGALVPVLLLILWEAGSRAGLFSEVLLPSPTAVAIKWWAYLMPGQPQEAGQSTLAWMFSGELPHDAYSSLF
RVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPIPPIAYIPLAILWFGLGNPPSFFLIAIGAFFPVLMNTIAGV
RQVDGIYLRAARNLGVNQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIAVNDGLGFRILEAREFMWSDKIIAG
MITIGLLGLAIDTAVSRLNNHLLRWHRGLEH
>Mature_271_residues
MLQKMKDFAHGALVPVLLLILWEAGSRAGLFSEVLLPSPTAVAIKWWAYLMPGQPQEAGQSTLAWMFSGELPHDAYSSLF
RVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPIPPIAYIPLAILWFGLGNPPSFFLIAIGAFFPVLMNTIAGV
RQVDGIYLRAARNLGVNQWTMFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIAVNDGLGFRILEAREFMWSDKIIAG
MITIGLLGLAIDTAVSRLNNHLLRWHRGLEH

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=253, Percent_Identity=35.9683794466403, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786564, Length=250, Percent_Identity=33.2, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1789033, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788449, Length=201, Percent_Identity=30.3482587064677, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29652; Mature: 29652

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKMKDFAHGALVPVLLLILWEAGSRAGLFSEVLLPSPTAVAIKWWAYLMPGQPQEAGQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH
STLAWMFSGELPHDAYSSLFRVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPI
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PPIAYIPLAILWFGLGNPPSFFLIAIGAFFPVLMNTIAGVRQVDGIYLRAARNLGVNQWT
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHCCCHHHH
MFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIAVNDGLGFRILEAREFMWSDKIIAG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
MITIGLLGLAIDTAVSRLNNHLLRWHRGLEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQKMKDFAHGALVPVLLLILWEAGSRAGLFSEVLLPSPTAVAIKWWAYLMPGQPQEAGQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH
STLAWMFSGELPHDAYSSLFRVIAGFLIGAGLALPFGLLMGASTRIYALFNPLMQILRPI
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PPIAYIPLAILWFGLGNPPSFFLIAIGAFFPVLMNTIAGVRQVDGIYLRAARNLGVNQWT
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHCCCHHHH
MFTRVILPAATPYILAGVRIGIGTAFIVVIVSEMIAVNDGLGFRILEAREFMWSDKIIAG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
MITIGLLGLAIDTAVSRLNNHLLRWHRGLEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA