| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907766
Identifier: 71907766
GI number: 71907766
Start: 2310145
End: 2311155
Strand: Reverse
Name: 71907766
Synonym: Daro_2143
Alternate gene names: NA
Gene position: 2311155-2310145 (Counterclockwise)
Preceding gene: 71907767
Following gene: 71907763
Centisome position: 51.35
GC content: 59.94
Gene sequence:
>1011_bases ATGAACATCAACATTAAATTGAACTCTCTTGCGCTTGGCGTGCCTGTTGTTCGCAGCATCTTTTTTGGAGGGTTTCTTGC GAGCCTGGTTTCGGGTTGTGCACTTCTCCAACCGCCGACTATCGACCCCACGCCCCTGGAGATCGGCAAGCTCCCGGCGC CCGATATCACCGTCCGAATCCCACAGTTGGGTCCCTGTACCGATGCGCCGGAGAAGAATATATCCCTCGACTCGTCACAG CCGGTCACCGTTCTGGTGCACGGTTGTAATGGTTCAGCGGGACGGTTCCGCTCCCTCGCCCAGCTCTATGCGTTTCATGG CCAACAGGCGGTCTGTTTCAGCTATGACGACCGGGCCAGCCTGGTCCAAAGCGCAACCCAGCTGGCTGAGGCGGTCGGGG CTCTGGCGGGGAAAATGCGCAATCGCGACATCACGGTTATTGGTCACAGCATGGGCGGACTGATAGCAAGGAGGTCGATG GAAGGCGAGCACAGATCCGAGTGGGAGCGCGATGCGGTTAACGTGAACCTGGTAACAGTCTCGGCGCCACTTTCCGGCAT TGCGGCGGCGAGTCCATGCGGCTATAGCGGCTTGCACTGGGCTAGTTTTGGTCTAGTGCCGCTCAGTTGCCGGGCGGTCA CCGGCGACAACTGGTATGAAATCACTTCATCTTCTGATTTCATCCGCCGCCCCGGTCCGCTGATCGCCTCAGTCCAACGC TACCTGAAGGTGGTGACGGATGAGCGCGATAGATGCCGCCGTCGCGACGACGCGGGCGCTTGCGTGGAGAGCGACTATAT CTTCAGCCTCGCCGAGCAGTACCAGCCGATCATCGACAGCTACCCGCGCCTTGCCAACGTTGAAGTGGCGGCCGGCCACG TGGAGATCGTTGGCTACAAAGGGGTCGCGCCGCGCCAGTTGATTTCGATTCTGCAACAGCAGGGTTTGCTGGCCTCCACC GCAGCGGAACGCGAGGCGGCCTTCAACCTGCTGATAGCAGAGCTCTACTGA
Upstream 100 bases:
>100_bases TAGGCCGCTCACTTCAGCGGTTATACGGTACGTTTCGCCGCATCACGGACCATTTTTTCTTGGTTCCTATCGGCGGCCAT TTTGATTTAGGCTAGATCGC
Downstream 100 bases:
>100_bases CGCCAAATTTATTGCCAGCTCCCGCAATGGCAAGAACAATAGGGGGGGCACGGTTTTCCATTTTGATTAGCCGCTTTCAG ACAGCAGCTAGGTCCGCAAT
Product: hydrolase/lipase
Products: NA
Alternate protein names: Hydrolase/Lipase; Lipoprotein
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNINIKLNSLALGVPVVRSIFFGGFLASLVSGCALLQPPTIDPTPLEIGKLPAPDITVRIPQLGPCTDAPEKNISLDSSQ PVTVLVHGCNGSAGRFRSLAQLYAFHGQQAVCFSYDDRASLVQSATQLAEAVGALAGKMRNRDITVIGHSMGGLIARRSM EGEHRSEWERDAVNVNLVTVSAPLSGIAAASPCGYSGLHWASFGLVPLSCRAVTGDNWYEITSSSDFIRRPGPLIASVQR YLKVVTDERDRCRRRDDAGACVESDYIFSLAEQYQPIIDSYPRLANVEVAAGHVEIVGYKGVAPRQLISILQQQGLLAST AAEREAAFNLLIAELY
Sequences:
>Translated_336_residues MNINIKLNSLALGVPVVRSIFFGGFLASLVSGCALLQPPTIDPTPLEIGKLPAPDITVRIPQLGPCTDAPEKNISLDSSQ PVTVLVHGCNGSAGRFRSLAQLYAFHGQQAVCFSYDDRASLVQSATQLAEAVGALAGKMRNRDITVIGHSMGGLIARRSM EGEHRSEWERDAVNVNLVTVSAPLSGIAAASPCGYSGLHWASFGLVPLSCRAVTGDNWYEITSSSDFIRRPGPLIASVQR YLKVVTDERDRCRRRDDAGACVESDYIFSLAEQYQPIIDSYPRLANVEVAAGHVEIVGYKGVAPRQLISILQQQGLLAST AAEREAAFNLLIAELY >Mature_336_residues MNINIKLNSLALGVPVVRSIFFGGFLASLVSGCALLQPPTIDPTPLEIGKLPAPDITVRIPQLGPCTDAPEKNISLDSSQ PVTVLVHGCNGSAGRFRSLAQLYAFHGQQAVCFSYDDRASLVQSATQLAEAVGALAGKMRNRDITVIGHSMGGLIARRSM EGEHRSEWERDAVNVNLVTVSAPLSGIAAASPCGYSGLHWASFGLVPLSCRAVTGDNWYEITSSSDFIRRPGPLIASVQR YLKVVTDERDRCRRRDDAGACVESDYIFSLAEQYQPIIDSYPRLANVEVAAGHVEIVGYKGVAPRQLISILQQQGLLAST AAEREAAFNLLIAELY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36154; Mature: 36154
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINIKLNSLALGVPVVRSIFFGGFLASLVSGCALLQPPTIDPTPLEIGKLPAPDITVRI CEEEEEECCEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEC PQLGPCTDAPEKNISLDSSQPVTVLVHGCNGSAGRFRSLAQLYAFHGQQAVCFSYDDRAS CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHH LVQSATQLAEAVGALAGKMRNRDITVIGHSMGGLIARRSMEGEHRSEWERDAVNVNLVTV HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHCEEEEEEEE SAPLSGIAAASPCGYSGLHWASFGLVPLSCRAVTGDNWYEITSSSDFIRRPGPLIASVQR ECCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEECCCCCHHHCCCHHHHHHHH YLKVVTDERDRCRRRDDAGACVESDYIFSLAEQYQPIIDSYPRLANVEVAAGHVEIVGYK HHHHHCCCHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEC GVAPRQLISILQQQGLLASTAAEREAAFNLLIAELY CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNINIKLNSLALGVPVVRSIFFGGFLASLVSGCALLQPPTIDPTPLEIGKLPAPDITVRI CEEEEEECCEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEC PQLGPCTDAPEKNISLDSSQPVTVLVHGCNGSAGRFRSLAQLYAFHGQQAVCFSYDDRAS CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHH LVQSATQLAEAVGALAGKMRNRDITVIGHSMGGLIARRSMEGEHRSEWERDAVNVNLVTV HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHCEEEEEEEE SAPLSGIAAASPCGYSGLHWASFGLVPLSCRAVTGDNWYEITSSSDFIRRPGPLIASVQR ECCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEECCCCCHHHCCCHHHHHHHH YLKVVTDERDRCRRRDDAGACVESDYIFSLAEQYQPIIDSYPRLANVEVAAGHVEIVGYK HHHHHCCCHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEC GVAPRQLISILQQQGLLASTAAEREAAFNLLIAELY CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA